The 2nd Epigenome Informatics Workshop
September 9th – 11th, 2010 in Houston, Texas
Thursday, Sep 9th 2010
| 8:30 am | Registration & Continental Breakfast in the Cafe |
| 9:00 am | Opening. Aleksandar Milosavljevic |
| 9:05 am | Participant's Introduction |
| 9:35 am | Module 1 - Intro to Workshop and EDACC. Aleksandar Milosavljevic |
| 10:00 am | Module 2 - Methods for methylation mapping. Alan Harris |
| 10:30 am | 15min break |
| 10:45 am | Module 3 - Metadata Validation and Data Submission. Alan Harris |
| 12 noon | Lunch in the Cafe |
| 1:00 pm | Module 4 - Analysis pipelines. Cristian Coarfa |
| 2:30 pm | Kim Andrews introduces BluBioU (optional) |
| 2:45 pm | 15min break |
| 3:00 pm | Module 5 - Quality Control. Cristian Coarfa |
| 4:30 pm | Adjourn |
| 6:00 pm | Dinner at Cielo’s Mexican Bistro - attendance optional Meet in the lobby of the Marriott to take the train to Downtown Houston Reservation is for 6.30pm / see menu at back of this packet 300 Main Street – Preston Rail Station |
Friday, Sep 10th 2010
| 8.30 am | Continental Breakfast in Cafe |
| 9:00 am | Module 6 - Genboree and Epigenome Comparison. Aleksandar Milosavljevic |
| 10:30 am | 15min break |
| 10:45 am | Module 7 - Epigenome Comparison. Aleksandar Milosavljevic |
| 12 noon | Lunch in the Cafe |
| 1:00 pm | Module 8 - Using Genboree REST APIs . Andrew Jackson |
| 2:00 pm | Module 9 - Case study: exploring collaboration between EDACC and a disease project. Leo Schalkwyk and Cristian Coarfa |
| 3:00 pm | 15min break |
| 3:15 pm | Participant Presentations - "Methods and tools for comparative and integrative analysis of epigenomic data." Mukaila Akinbami |
| 3:45pm | Participant Presentations - "Methods and tools for comparative and integrative analysis of epigenomic data." Qiang Jing |
| 4:15 pm | Discussion |
| 5:00 pm | Adjourn |
Saturday, Sep 11th 2010
| 8.30 am | Continental Breakfast in Cafe |
| 9:00 am | Participant Presentations - "Distance based methylation enrichment in cancer as an alternative approach for unseeded de novo motif discovery." Marc Jung |
| 9:30 am | Participant Presentations - "Combining DNA methylation data with gene expression data." Lauren Mills |
| 10:00 am | Feedback on the workshop by workshop participants |
| 10:45 am | Discussion: Future interaction between EDACC and Epigenomics Roadmap Disease projects |
| 11:15 am | Conclusions and Closing Remarks. Aleksandar Milosavljevic |
| 11:30 am | Adjourn |
This page last reviewed on January 10, 2014