Publications Search by Program
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The search results on this publication page are automated on a monthly schedule based on acknowledgment of NIH Common Fund award numbers and intramural awards. Therefore, this list is not an exhaustive or error-free account of the program’s publications.
NIH Director’s Transformative Research Awards (3406)
| Publication Title | Authors | Journal | Publication Date | Page No | PubMedID |
|---|---|---|---|---|---|
| Contextual modifiers of healthspan, lifespan, and epigenome in mice under chronic social stress. | Razzoli, Maria; Nyuyki-Dufe, Kewir; Chen, Brian H; Bartolomucci, Alessandro | Proceedings of the National Academy of Sciences of the United States of America | 2023 Apr 18 | e2211755120 | 37043532 |
| Engineered Escherichia coli for the in situ secretion of therapeutic nanobodies in the gut. | Lynch, Jason P; González-Prieto, Coral; Reeves, Analise Z; Bae, Sena; Powale, Urmila; Godbole, Neha P; Tremblay, Jacqueline M; Schmidt, Florian I; Ploegh, Hidde L; Kansra, Vikram; Glickman, Jonathan N; Leong, John M; Shoemaker, Charles B; Garrett, Wendy S | Cell host & microbe | 2023 Apr 12 | 634-649.e8 | 37003258 |
| Conserved transcription factors promote cell fate stability and restrict reprogramming potential in differentiated cells. | Missinato, Maria A; Murphy, Sean; Lynott, Michaela; Yu, Michael S; Kervadec, Anaïs; Chang, Yu-Ling; Kannan, Suraj; Loreti, Mafalda; Lee, Christopher; Amatya, Prashila; Tanaka, Hiroshi; Huang, Chun-Teng; Puri, Pier Lorenzo; Kwon, Chulan; Adams, Peter D; Qi | Nature communications | 2023 Mar 27 | 1709 | 36973293 |
| Autophagy at the synapse, an early site of dysfunction in neurodegeneration. | Jasutkar, Hilary Grosso; Yamamoto, Ai | Current opinion in physiology | 2023 Apr | 36968133 | |
| Error-Correction Method for High-Throughput Sizing of Nanoscale Vesicles with Single-Molecule Localization Microscopy. | Jung, Seung-Ryoung; Kim, James; Vojtech, Lucia; Vaughan, Joshua C; Chiu, Daniel T | The journal of physical chemistry. B | 2023 Mar 30 | 2701-2707 | 36944080 |
| The Family of Single-Case Experimental Designs. | Epstein, Leonard H; Dallery, Jesse | Harvard data science review | 2022 | 36926648 | |
| Increased mesoscale diffusivity in response to acute glucose starvation. | Xie, Ying; Gresham, David; Holt, Liam J | microPublication biology | 2023 | 36908311 | |
| Selective Serotonin Reuptake Inhibitors within Cells: Temporal Resolution in Cytoplasm, Endoplasmic Reticulum, and Membrane. | Nichols, Aaron L; Blumenfeld, Zack; Luebbert, Laura; Knox, Hailey J; Muthusamy, Anand K; Marvin, Jonathan S; Kim, Charlene H; Grant, Stephen N; Walton, David P; Cohen, Bruce N; Hammar, Rebekkah; Looger, Loren; Artursson, Per; Dougherty, Dennis A; Lester, | The Journal of neuroscience : the official journal of the Society for Neuroscience | 2023 Mar 29 | 2222-2241 | 36868853 |
| Molecular Damage in Aging. | Gladyshev, Vadim N; Kritchevsky, Stephen B; Clarke, Steven G; Cuervo, Ana Maria; Fiehn, Oliver; de Magalhães, João Pedro; Mau, Theresa; Maes, Michal; Moritz, Robert; Niedernhofer, Laura J; Van Schaftingen, Emile; Tranah, Gregory J; Walsh, Kenneth; Yura, Yoshimitsu; Zhang, Bohan; Cummings, Steven R | Nature aging | 2021 Dec | 1096-1106 | 36846190 |
| Deep ensemble learning enables highly accurate classification of stored red blood cell morphology. | Routt, Austin H; Yang, Natalia; Piety, Nathaniel Z; Lu, Madeleine; Shevkoplyas, Sergey S | Scientific reports | 2023 Feb 23 | 3152 | 36823298 |
| Route-dependent spatial engram tagging in mouse dentate gyrus. | Wilmerding, Lucius K; Kondratyev, Ivan; Ramirez, Steve; Hasselmo, Michael E | Neurobiology of learning and memory | 2023 Apr | 107738 | 36822466 |
| PNMA2 forms non-enveloped virus-like capsids that trigger paraneoplastic neurological syndrome. | Xu, Junjie; Erlendsson, Simon; Singh, Manvendra; Regier, Matthew; Ibiricu, Iosune; Day, Gregory S; Piquet, Amanda L; Clardy, Stacey L; Feschotte, Cedric; Briggs, John A G; Shepherd, Jason D | bioRxiv : the preprint server for biology | 2023 Feb 09 | 36798413 | |
| PIKFYVE inhibition mitigates disease in models of diverse forms of ALS. | Hung, Shu-Ting; Linares, Gabriel R; Chang, Wen-Hsuan; Eoh, Yunsun; Krishnan, Gopinath; Mendonca, Stacee; Hong, Sarah; Shi, Yingxiao; Santana, Manuel; Kueth, Chuol; Macklin-Isquierdo, Samantha; Perry, Sarah; Duhaime, Sarah; Maios, Claudia; Chang, Jonathan; Perez, Joscany; Couto, Alexander; Lai, Jesse; Li, Yichen; Alworth, Samuel V; Hendricks, Eric; Wang, Yaoming; Zlokovic, Berislav V; Dickman, Dion K; Parker, J Alex; Zarnescu, Daniela C; Gao, Fen-Biao; Ichida, Justin K | Cell | 2023 Feb 16 | 786-802.e28 | 36754049 |
| SYF2 suppression mitigates neurodegeneration in models of diverse forms of ALS. | Linares, Gabriel R; Li, Yichen; Chang, Wen-Hsuan; Rubin-Sigler, Jasper; Mendonca, Stacee; Hong, Sarah; Eoh, Yunsun; Guo, Wenxuan; Huang, Yi-Hsuan; Chang, Jonathan; Tu, Sharon; Dorjsuren, Nomongo; Santana, Manuel; Hung, Shu-Ting; Yu, Johnny; Perez, Joscany; Chickering, Michael; Cheng, Tze-Yuan; Huang, Chi-Chou; Lee, Shih-Jong James; Deng, Hao-Jen; Bach, Kieu-Tram; Gray, Kamden; Subramanyam, Vishvak; Rosenfeld, Jeffrey; Alworth, Samuel V; Goodarzi, Hani; Ichida, Justin K | Cell stem cell | 2023 Feb 02 | 171-187.e14 | 36736291 |
| Broad-spectrum antiviral inhibitors targeting pandemic potential RNA viruses. | Garcia, Gustavo; Irudayam, Joseph Ignatius; Jeyachandran, Arjit Vijay; Dubey, Swati; Chang, Christina; Cario, Sebastian Castillo; Price, Nate; Arumugam, Sathya; Marquez, Angelica L; Shah, Aayushi; Fanaei, Amir; Chakravarty, Nikhil; Joshi, Shantanu; Sinha, Sanjeev; French, Samuel W; Parcells, Mark; Ramaiah, Arunachalam; Arumugaswami, Vaithilingaraja | bioRxiv : the preprint server for biology | 2023 Jan 20 | 36711787 | |
| Increased mesoscale diffusivity in response to acute glucose starvation. | Xie, Ying; Gresham, David; Holt, Liam | bioRxiv : the preprint server for biology | 2023 Jan 12 | 36711511 | |
| An atlas of lamina-associated chromatin across twelve human cell types reveals an intermediate chromatin subtype. | Shah, Parisha P; Keough, Kathleen C; Gjoni, Ketrin; Santini, Garrett T; Abdill, Richard J; Wickramasinghe, Nadeera M; Dundes, Carolyn E; Karnay, Ashley; Chen, Angela; Salomon, Rachel E A; Walsh, Patrick J; Nguyen, Son C; Whalen, Sean; Joyce, Eric F; Loh, Kyle M; Dubois, Nicole; Pollard, Katherine S; Jain, Rajan | Genome biology | 2023 Jan 23 | 16 | 36691074 |
| Phase Separation in Biology and Disease; Current Perspectives and Open Questions. | Boeynaems, Steven; Chong, Shasha; Gsponer, Jörg; Holt, Liam; Milovanovic, Dragomir; Mitrea, Diana M; Mueller-Cajar, Oliver; Portz, Bede; Reilly, John F; Reinkemeier, Christopher D; Sabari, Benjamin R; Sanulli, Serena; Shorter, James; Sontag, Emily; Strader, Lucia; Stachowiak, Jeanne; Weber, Stephanie C; White, Michael; Zhang, Huaiying; Zweckstetter, Markus; Elbaum-Garfinkle, Shana; Kriwacki, Richard | Journal of molecular biology | 2023 Mar 01 | 167971 | 36690068 |
| Ozone Disinfection for Elimination of Bacteria and Degradation of SARS-CoV2 RNA for Medical Environments. | Westover, Craig; Rahmatulloev, Savlatjon; Danko, David; Afshin, Evan E; O'Hara, Niamh B; Ounit, Rachid; Bezdan, Daniela; Mason, Christopher E | Genes | 2022 Dec 28 | 36672826 | |
| Mapping the signaling network of BIN2 kinase using TurboID-mediated biotin labeling and phosphoproteomics. | Kim, Tae-Wuk; Park, Chan Ho; Hsu, Chuan-Chih; Kim, Yeong-Woo; Ko, Yeong-Woo; Zhang, Zhenzhen; Zhu, Jia-Ying; Hsiao, Yu-Chun; Branon, Tess; Kaasik, Krista; Saldivar, Evan; Li, Kevin; Pasha, Asher; Provart, Nicholas J; Burlingame, Alma L; Xu, Shou-Ling; Tin | The Plant cell | 2023 Mar 15 | 975-993 | 36660928 |
| Mechanisms That Underlie Expression of Estradiol-Induced Excitatory Synaptic Potentiation in the Hippocampus Differ between Males and Females. | Jain, Anant; Woolley, Catherine S | The Journal of neuroscience : the official journal of the Society for Neuroscience | 2023 Feb 22 | 1298-1309 | 36650060 |
| Variable selection with multiply-imputed datasets: choosing between stacked and grouped methods. | Du, Jiacong; Boss, Jonathan; Han, Peisong; Beesley, Lauren J; Kleinsasser, Michael; Goutman, Stephen A; Batterman, Stuart; Feldman, Eva L; Mukherjee, Bhramar | Journal of computational and graphical statistics : a joint publication of American Statistical Association, Institute of Mathematical Statistics, Interface Foundation of North America | 2022 | 1063-1075 | 36644406 |
| Tuning phenylalanine fluorination to assess aromatic contributions to protein function and stability in cells. | Galles, Grace D; Infield, Daniel T; Clark, Colin J; Hemshorn, Marcus L; Manikandan, Shivani; Fazan, Frederico; Rasouli, Ali; Tajkhorshid, Emad; Galpin, Jason D; Cooley, Richard B; Mehl, Ryan A; Ahern, Christopher A | Nature communications | 2023 Jan 04 | 59 | 36599844 |
| Helicobacter pylori Chronic Infection Selects for Effective Colonizers of Metaplastic Glands. | O'Brien, V P; Jackson, L K; Frick, J P; Rodriguez Martinez, A E; Jones, D S; Johnston, C D; Salama, N R | mBio | 2023 Feb 28 | e0311622 | 36598261 |
| Differential dynamics and direct interaction of bound ligands with lipids in multidrug transporter ABCG2. | Rasouli, Ali; Yu, Qin; Dehghani-Ghahnaviyeh, Sepehr; Wen, Po-Chao; Kowal, Julia; Locher, Kaspar P; Tajkhorshid, Emad | Proceedings of the National Academy of Sciences of the United States of America | 2023 Jan 03 | e2213437120 | 36580587 |
| Systems Biology Analysis of Temporal Dynamics That Govern Endothelial Response to Cyclic Stretch. | Lai, Michael W; Chow, Nathan; Checco, Antonio; Kunar, Balvir; Redmond, David; Rafii, Shahin; Rabbany, Sina Y | Biomolecules | 2022 Dec 08 | 36551265 | |
| Fluorescence Screens for Identifying Central Nervous System-Acting Drug-Biosensor Pairs for Subcellular and Supracellular Pharmacokinetics. | Beatty, Zoe G; Muthusamy, Anand K; Unger, Elizabeth K; Dougherty, Dennis A; Tian, Lin; Looger, Loren L; Shivange, Amol V; Bera, Kallol; Lester, Henry A; Nichols, Aaron L | Bio-protocol | 2022 Nov 20 | 36532688 | |
| pH-Responsive Charge-Conversion Progelator Peptides. | Carlini, Andrea S; Choi, Wonmin; McCallum, Naneki C; Gianneschi, Nathan C | Advanced functional materials | 2021 Mar 24 | 36530181 | |
| Cryo-EM structures of human ABCA7 provide insights into its phospholipid translocation mechanisms. | Le, Le Thi My; Thompson, James Robert; Dehghani-Ghahnaviyeh, Sepehr; Pant, Shashank; Dang, Phuoc Xuan; French, Jarrod Bradley; Kanikeyo, Takahisa; Tajkhorshid, Emad; Alam, Amer | The EMBO journal | 2023 Feb 01 | e111065 | 36484366 |
| An in silico method to assess antibody fragment polyreactivity. | Harvey, Edward P; Shin, Jung-Eun; Skiba, Meredith A; Nemeth, Genevieve R; Hurley, Joseph D; Wellner, Alon; Shaw, Ada Y; Miranda, Victor G; Min, Joseph K; Liu, Chang C; Marks, Debora S; Kruse, Andrew C | Nature communications | 2022 Dec 07 | 7554 | 36477674 |
| Allelic correlation is a marker of trade-offs between barriers to transmission of expression variability and signal responsiveness in genetic networks. | Boe, Ryan H; Ayyappan, Vinay; Schuh, Lea; Raj, Arjun | Cell systems | 2022 Dec 21 | 36450286 | |
| Simultaneous mapping of 3D structure and nascent RNAs argues against nuclear compartments that preclude transcription. | Goronzy, Isabel N; Quinodoz, Sofia A; Jachowicz, Joanna W; Ollikainen, Noah; Bhat, Prashant; Guttman, Mitchell | Cell reports | 2022 Nov 29 | 36450242 | |
| Weapons of stress reduction: (R,S)-ketamine and its metabolites as prophylactics for the prevention of stress-induced psychiatric disorders. | Chen, Briana K; Denny, Christine A | Neuropharmacology | 2023 Feb 15 | 109345 | 36427554 |
| Identifying Common Molecular Mechanisms in Experimental and Human Acute Kidney Injury. | Gerhardt, Louisa M S; McMahon, Andrew P | Seminars in nephrology | 2022 May | 151286 | 36402654 |
| Flexible and Implantable Polyimide Aptamer-Field-Effect Transistor Biosensors. | Zhao, Chuanzhen; Man, Tianxing; Cao, Yan; Weiss, Paul S; Monbouquette, Harold G; Andrews, Anne M | ACS sensors | 2022 Dec 23 | 3644-3653 | 36399772 |
| Extraction and Purification of Single Nuclei from Frozen Human Brain Tissue. | Palmer, Carter R; Chun, Jerold | Methods in molecular biology (Clifton, N.J.) | 2023 | 36399263 | |
| A Statistical Perspective on the Challenges in Molecular Microbial Biology. | Jeganathan, Pratheepa; Holmes, Susan P | Journal of agricultural, biological, and environmental statistics | 2021 Jun | 36398283 | |
| Effect of the intratumoral microbiota on spatial and cellular heterogeneity in cancer. | Galeano Niño, Jorge Luis; Wu, Hanrui; LaCourse, Kaitlyn D; Kempchinsky, Andrew G; Baryiames, Alexander; Barber, Brittany; Futran, Neal; Houlton, Jeffrey; Sather, Cassie; Sicinska, Ewa; Taylor, Alison; Minot, Samuel S; Johnston, Christopher D; Bullman, Susan | Nature | 2022 Nov | 36385528 | |
| The cancer chemotherapeutic 5-fluorouracil is a potent Fusobacterium nucleatum inhibitor and its activity is modified by intratumoral microbiota. | LaCourse, Kaitlyn D; Zepeda-Rivera, Martha; Kempchinsky, Andrew G; Baryiames, Alexander; Minot, Samuel S; Johnston, Christopher D; Bullman, Susan | Cell reports | 2022 Nov 15 | 36384132 | |
| Genetic architecture of natural variation of cardiac performance from flies to humans. | Saha, Saswati; Spinelli, Lionel; Castro Mondragon, Jaime A; Kervadec, Anaïs; Lynott, Michaela; Kremmer, Laurent; Roder, Laurence; Krifa, Sallouha; Torres, Magali; Brun, Christine; Vogler, Georg; Bodmer, Rolf; Colas, Alexandre R; Ocorr, Karen; Perrin, Laurent | eLife | 2022 Nov 16 | 36383075 | |
| An automated feeding system for the African killifish reveals effects of dietary restriction on lifespan and allows scalable assessment of associative learning. | McKay, Andrew; Costa, Emma K; Chen, Jingxun; Hu, Chi-Kuo; Chen, Xiaoshan; Bedbrook, Claire Nicole; Khondker, Rishad C; Thielvoldt, Mike; Priya Singh, Param; Wyss-Coray, Tony; Brunet, Anne | eLife | 2022 Nov 10 | 36354233 | |
| Hippo signaling pathway activation during SARS-CoV-2 infection contributes to host antiviral response. | Garcia Jr, Gustavo; Jeyachandran, Arjit Vijey; Wang, Yijie; Irudayam, Joseph Ignatius; Cario, Sebastian Castillo; Sen, Chandani; Li, Shen; Li, Yunfeng; Kumar, Ashok; Nielsen-Saines, Karin; French, Samuel W; Shah, Priya S; Morizono, Kouki; Gomperts, Brigitte N; Deb, Arjun; Ramaiah, Arunachalam; Arumugaswami, Vaithilingaraja | PLoS biology | 2022 Nov | 36346780 | |
| IDENTIFIABILITY OF INFECTION MODEL PARAMETERS EARLY IN AN EPIDEMIC. | Sauer, Timothy; Berry, Tyrus; Ebeigbe, Donald; Norton, Michael M; Whalen, Andrew J; Schiff, Steven J | SIAM journal on control and optimization | 2022 | 36338855 | |
| Buffer glucose adjustment affects myocardial function after ischemia-reperfusion in long-term diabetic rat isolated hearts. | Balzer, Claudius; Cleveland, William J; Li, Zhu; Riess, Matthias L | Physiological reports | 2022 11 | 36324287 | |
| Scientific opportunities in resilience research for cardiovascular health and wellness. Report from a National Heart, Lung, and Blood Institute workshop. | Taylor, Herman A; Finkel, Toren; Gao, Yunling; Ballinger, Scott W; Campo, Rebecca; Chen, Rong; Chen, Shu Hui; Davidson, Karina; Iruela-Arispe, M Luisa; Jaquish, Cashell; LeBrasseur, Nathan K; Odden, Michelle C; Papanicolaou, George J; Picard, Martin; Srinivas, Pothur; Tjurmina, Olga; Wolz, Michael; Galis, Zorina S | FASEB journal : official publication of the Federation of American Societies for Experimental Biology | 2022 Dec | 36322029 | |
| Body mass index associates with amyotrophic lateral sclerosis survival and metabolomic profiles. | Goutman, Stephen A; Boss, Jonathan; Iyer, Gayatri; Habra, Hani; Savelieff, Masha G; Karnovsky, Alla; Mukherjee, Bhramar; Feldman, Eva L | Muscle & nerve | 2022 Nov 02 | 36321729 | |
| High-throughput sequencing of single neuron projections reveals spatial organization in the olfactory cortex. | Chen, Yushu; Chen, Xiaoyin; Baserdem, Batuhan; Zhan, Huiqing; Li, Yan; Davis, Martin B; Kebschull, Justus M; Zador, Anthony M; Koulakov, Alexei A; Albeanu, Dinu F | Cell | 2022 Oct 27 | 36306734 | |
| Acceptability and Feasibility of eSCCIP: Results From a Pilot Study of the Electronic Surviving Cancer Competently Intervention Program. | Canter, Kimberly S; Vega, Gabriela; Perez Ramirez, Alejandra; Munoz Osorio, Angel; Thomas, Courtney; Lewis, Amanda M; Arasteh, Kamyar; Kazak, Anne | Journal of pediatric psychology | 2023 Mar 20 | 216-227 | 36303445 |
| Series of virtual light therapy interventions for fatigue: a feasibility pilot study protocol for a series of personalised (N-of-1) trials. | Butler, Mark; D'Angelo, Stefani; Lewis, Courtney; Miller, Danielle; Perrin, Alexandra; Suls, Jerry; Chandereng, Thevaa; Cheung, Ying Kuen; Davidson, Karina W | BMJ open | 2022 10 25 | 36283748 | |
| Analyses of the autism-associated neuroligin-3 R451C mutation in human neurons reveal a gain-of-function synaptic mechanism. | Wang, Le; Mirabella, Vincent R; Dai, Rujia; Su, Xiao; Xu, Ranjie; Jadali, Azadeh; Bernabucci, Matteo; Singh, Ishnoor; Chen, Yu; Tian, Jianghua; Jiang, Peng; Kwan, Kevin Y; Pak, ChangHui; Liu, Chunyu; Comoletti, Davide; Hart, Ronald P; Chen, Chao; Südhof, | Molecular psychiatry | 2022 Oct 24 | 36280753 | |
| ClampFISH 2.0 enables rapid, scalable amplified RNA detection in situ. | Dardani, Ian; Emert, Benjamin L; Goyal, Yogesh; Jiang, Connie L; Kaur, Amanpreet; Lee, Jasmine; Rouhanifard, Sara H; Alicea, Gretchen M; Fane, Mitchell E; Xiao, Min; Herlyn, Meenhard; Weeraratna, Ashani T; Raj, Arjun | Nature methods | 2022 Nov | 36280724 | |
| Assessing the Validity of the Ask Suicide-Screening Questions in Black Youth. | Horowitz, Lisa M; Mournet, Annabelle M; Sheftall, Arielle; He, Jian-Ping; Lowry, Nathan J; Aguinaldo, Laika D; Sullivant, Shayla A; Wharff, Elizabeth A; Merikangas, Kathleen R; Pao, Maryland; Bridge, Jeffrey A | Journal of the Academy of Consultation-Liaison Psychiatry | 2022 Oct 20 | 36273745 | |
| Spatially resolved epigenomic profiling of single cells in complex tissues. | Lu, Tian; Ang, Cheen Euong; Zhuang, Xiaowei | Cell | 2022 Nov 10 | 36272405 | |
| Oligodendroglial macroautophagy is essential for myelin sheath turnover to prevent neurodegeneration and death. | Aber, Etan R; Griffey, Christopher J; Davies, Tim; Li, Alice M; Yang, Young Joo; Croce, Katherine R; Goldman, James E; Grutzendler, Jaime; Canman, Julie C; Yamamoto, Ai | Cell reports | 2022 10 18 | 36261002 | |
| Somatic genomic mosaicism in the brain: Identified mutations provide challenges and opportunities for the clinic. | Chun, Jerold | Med (New York, N.Y.) | 2022 Oct 14 | 36242998 | |
| Targeting lipid-protein interaction to treat Syk-mediated acute myeloid leukemia. | Singaram, Indira; Sharma, Ashutosh; Pant, Shashank; Lihan, Muyun; Park, Mi-Jeong; Pergande, Melissa; Buwaneka, Pawanthi; Hu, Yusi; Mahmud, Nadim; Kim, You-Me; Cologna, Stephanie; Gevorgyan, Vladimir; Khan, Irum; Tajkhorshid, Emad; Cho, Wonhwa | Nature chemical biology | 2022 Oct 13 | 36229686 | |
| Structures of the TMC-1 complex illuminate mechanosensory transduction. | Jeong, Hanbin; Clark, Sarah; Goehring, April; Dehghani-Ghahnaviyeh, Sepehr; Rasouli, Ali; Tajkhorshid, Emad; Gouaux, Eric | Nature | 2022 10 | 36224384 | |
| MiOS, an integrated imaging and computational strategy to model gene folding with nucleosome resolution. | Neguembor, Maria Victoria; Arcon, Juan Pablo; Buitrago, Diana; Lema, Rafael; Walther, Jürgen; Garate, Ximena; Martin, Laura; Romero, Pablo; AlHaj Abed, Jumana; Gut, Marta; Blanc, Julie; Lakadamyali, Melike; Wu, Chao-Ting; Brun Heath, Isabelle; Orozco, Mod | Nature structural & molecular biology | 2022 Oct | 36220894 | |
| In situ cell-type-specific cell-surface proteomic profiling in mice. | Shuster, S Andrew; Li, Jiefu; Chon, URee; Sinantha-Hu, Miley C; Luginbuhl, David J; Udeshi, Namrata D; Carey, Dominique Kiki; Takeo, Yukari H; Xie, Qijing; Xu, Chuanyun; Mani, D R; Han, Shuo; Ting, Alice Y; Carr, Steven A; Luo, Liqun | Neuron | 2022 Dec 07 | 36220098 | |
| miRNA analysis reveals novel dysregulated pathways in amyotrophic lateral sclerosis. | Hur, Junguk; Paez-Colasante, Ximena; Figueroa-Romero, Claudia; Lo, Ting-Wen; Barmada, Sami J; Paulsen, Michelle; Ljungman, Mats; Alakwaa, Fadhl M; Savelieff, Masha G; Goutman, Stephen A; Feldman, Eva L | Human molecular genetics | 2022 Oct 11 | 36219176 | |
| Profiling epigenetic age in single cells. | Trapp, Alexandre; Kerepesi, Csaba; Gladyshev, Vadim N | Nature aging | 2021 Dec | 36211119 | |
| Occupational history associates with ALS survival and onset segment. | Goutman, Stephen A; Boss, Jonathan; Godwin, Christopher; Mukherjee, Bhramar; Feldman, Eva L; Batterman, Stuart A | Amyotrophic lateral sclerosis & frontotemporal degeneration | 2022 Oct 03 | 36193557 | |
| Identification of orphan ligand-receptor relationships using a cell-based CRISPRa enrichment screening platform. | Siepe, Dirk H; Henneberg, Lukas T; Wilson, Steven C; Hess, Gaelen T; Bassik, Michael C; Zinn, Kai; Garcia, K Christopher | eLife | 2022 Sep 30 | 36178190 | |
| Exploring Vessel Wall Biology In Vivo by Ultrasensitive Total-Body PET. | Derlin, Thorsten; Spencer, Benjamin A; Mamach, Martin; Abdelhafez, Yasser; Nardo, Lorenzo; Badawi, Ramsey D; Cherry, Simon R; Bengel, Frank M | Journal of nuclear medicine : official publication, Society of Nuclear Medicine | 2023 Mar | 416-422 | 36175139 |
| Lutetium background radiation in total-body PET-A simulation study on opportunities and challenges in PET attenuation correction. | Omidvari, Negar; Cheng, Li; Leung, Edwin K; Abdelhafez, Yasser G; Badawi, Ramsey D; Ma, Tianyu; Qi, Jinyi; Cherry, Simon R | Frontiers in nuclear medicine (Lausanne, Switzerland) | 2022 | 36172601 | |
| Replication-Deficient Zika Vector-Based Vaccine Provides Maternal and Fetal Protection in Mouse Model. | Garcia Jr, Gustavo; Chakravarty, Nikhil; Abu, Angel Elma; Jeyachandran, Arjit Vijey; Takano, Kari-Ann; Brown, Rebecca; Morizono, Kouki; Arumugaswami, Vaithilingaraja | Microbiology spectrum | 2022 Oct 26 | 36169338 | |
| Immunization with Genetically Modified Trypanosomes Provides Protection against Transmissible Spongiform Encephalopathies. | Triller, Gianna; Garyfallos, Dimitrios A; Papavasiliou, F Nina; Sklaviadis, Theodoros; Stavropoulos, Pete; Xanthopoulos, Konstantinos | International journal of molecular sciences | 2022 Sep 13 | 36142526 | |
| Label-free intraoperative histology of bone tissue via deep-learning-assisted ultraviolet photoacoustic microscopy. | Cao, Rui; Nelson, Scott D; Davis, Samuel; Liang, Yu; Luo, Yilin; Zhang, Yide; Crawford, Brooke; Wang, Lihong V | Nature biomedical engineering | 2022 Sep 19 | 36123403 | |
| Amyotrophic lateral sclerosis. | Feldman, Eva L; Goutman, Stephen A; Petri, Susanne; Mazzini, Letizia; Savelieff, Masha G; Shaw, Pamela J; Sobue, Gen | Lancet (London, England) | 2022 Oct 15 | 36116464 | |
| Condensed-phase signaling can expand kinase specificity and respond to macromolecular crowding. | Sang, Dajun; Shu, Tong; Pantoja, Christian F; Ibáñez de Opakua, Alain; Zweckstetter, Markus; Holt, Liam J | Molecular cell | 2022 Oct 06 | 36108633 | |
| Single domain antibodies against enteric pathogen virulence factors are active as curli fiber fusions on probiotic E. coli Nissle 1917. | Gelfat, Ilia; Aqeel, Yousuf; Tremblay, Jacqueline M; Jaskiewicz, Justyna J; Shrestha, Anishma; Lee, James N; Hu, Shenglan; Qian, Xi; Magoun, Loranne; Sheoran, Abhineet; Bedenice, Daniela; Giem, Colter; Manjula-Basavanna, Avinash; Pulsifer, Amanda R; Tu, H | PLoS pathogens | 2022 09 | 36107831 | |
| Human hepatocyte PNPLA3-148M exacerbates rapid non-alcoholic fatty liver disease development in chimeric mice. | Kabbani, Mohammad; Michailidis, Eleftherios; Steensels, Sandra; Fulmer, Clifton G; Luna, Joseph M; Le Pen, Jérémie; Tardelli, Matteo; Razooky, Brandon; Ricardo-Lax, Inna; Zou, Chenhui; Zeck, Briana; Stenzel, Ansgar F; Quirk, Corrine; Foquet, Lander; Ashbr | Cell reports | 2022 Sep 13 | 36103835 | |
| Specialized Pro-Resolving Mediators as Resolution Pharmacology for the Control of Pain and Itch. | Ji, Ru-Rong | Annual review of pharmacology and toxicology | 2023 Jan 20 | 273-293 | 36100219 |
| Independent phenotypic plasticity axes define distinct obesity sub-types. | Yang, Chih-Hsiang; Fagnocchi, Luca; Apostle, Stefanos; Wegert, Vanessa; Casaní-Galdón, Salvador; Landgraf, Kathrin; Panzeri, Ilaria; Dror, Erez; Heyne, Steffen; Wörpel, Till; Chandler, Darrell P; Lu, Di; Yang, Tao; Gibbons, Elizabeth; Guerreiro, Rita; Bra | Nature metabolism | 2022 Sep | 36097183 | |
| A bacterial pan-genome makes gene essentiality strain-dependent and evolvable. | Rosconi, Federico; Rudmann, Emily; Li, Jien; Surujon, Defne; Anthony, Jon; Frank, Matthew; Jones, Dakota S; Rock, Charles; Rosch, Jason W; Johnston, Christopher D; van Opijnen, Tim | Nature microbiology | 2022 Oct | 36097170 | |
| Longitudinal Evaluation of Antibody Persistence in Mother-Infant Dyads Following SARS-CoV-2 Infection in Pregnancy. | Cambou, Mary C; Liu, Christine M; Mok, Thalia; Fajardo-Martinez, Viviana; Paiola, Sophia G; Ibarrondo, Francisco J; Kerin, Tara; Fuller, Trevon; Tobin, Nicole H; Garcia, Gustavo; Bhattacharya, Debika; Aldrovandi, Grace M; Arumugaswami, Vaithilingaraja; Fo | The Journal of infectious diseases | 2022 Sep 09 | 36082433 | |
| A single-administration therapeutic interfering particle reduces SARS-CoV-2 viral shedding and pathogenesis in hamsters. | Chaturvedi, Sonali; Beutler, Nathan; Vasen, Gustavo; Pablo, Michael; Chen, Xinyue; Calia, Giuliana; Buie, Lauren; Rodick, Robert; Smith, Davey; Rogers, Thomas; Weinberger, Leor S | Proceedings of the National Academy of Sciences of the United States of America | 2022 09 27 | 36074824 | |
| Targeting BCL-XL in fibrolamellar hepatocellular carcinoma. | Shebl, Bassem; Ng, Denise; Lalazar, Gadi; Rosemore, Carly; Finkelstein, Tova M; Migler, Rachael D; Zheng, Guangrong; Zhang, Peiyi; Jiang, Caroline S; Qureshi, Adam; Vaughan, Roger; Yarchoan, Mark; de Jong, Ype P; Rice, Charles M; Coffino, Philip; Ortiz, M | JCI insight | 2022 09 08 | 36073545 | |
| CAQK, a peptide associating with extracellular matrix components targets sites of demyelinating injuries. | Abi-Ghanem, Charly; Jonnalagadda, Deepa; Chun, Jerold; Kihara, Yasuyuki; Ranscht, Barbara | Frontiers in cellular neuroscience | 2022 | 36072569 | |
| Changes in chromatin accessibility are not concordant with transcriptional changes for single-factor perturbations. | Kiani, Karun; Sanford, Eric M; Goyal, Yogesh; Raj, Arjun | Molecular systems biology | 2022 09 | 36069349 | |
| CIC missense variants contribute to susceptibility for spina bifida. | Han, Xiao; Cao, Xuanye; Aguiar-Pulido, Vanessa; Yang, Wei; Karki, Menuka; Ramirez, Paula Andrea Pimienta; Cabrera, Robert M; Lin, Ying Linda; Wlodarczyk, Bogdan J; Shaw, Gary M; Ross, M Elizabeth; Zhang, Cuilian; Finnell, Richard H; Lei, Yunping | Human mutation | 2022 Sep 02 | 36054333 | |
| Venous waveform analysis detects acute right ventricular failure in a rat respiratory arrest model. | Lefevre, Ryan J; Barajas, Matthew B; Balzer, Claudius; Baudenbacher, Franz J; Riess, Matthias L; Staudt, Genevieve; Hernandez, Antonio; Eagle, Susan S | Pediatric research | 2022 Aug 30 | 36042330 | |
| Sharing Begins at Home: How Continuous and Ubiquitous FAIRness Can Enhance Research Productivity and Data Reuse. | Dempsey, William; Foster, Ian; Fraser, Scott; Kesselman, Carl | Harvard data science review | 2022 | 36035065 | |
| Structure and engineering of the minimal type VI CRISPR-Cas13bt3. | Nakagawa, Ryoya; Kannan, Soumya; Altae-Tran, Han; Takeda, Satoru N; Tomita, Atsuhiro; Hirano, Hisato; Kusakizako, Tsukasa; Nishizawa, Tomohiro; Yamashita, Keitaro; Zhang, Feng; Nishimasu, Hiroshi; Nureki, Osamu | Molecular cell | 2022 09 01 | 36027912 | |
| Embryo model completes gastrulation to neurulation and organogenesis. | Amadei, Gianluca; Handford, Charlotte E; Qiu, Chengxiang; De Jonghe, Joachim; Greenfeld, Hannah; Tran, Martin; Martin, Beth K; Chen, Dong-Yuan; Aguilera-Castrejon, Alejandro; Hanna, Jacob H; Elowitz, Michael B; Hollfelder, Florian; Shendure, Jay; Glover, David M; Zernicka-Goetz, Magdalena | Nature | 2022 10 | 36007540 | |
| Structure of the Human BK Ion Channel in Lipid Environment. | Tonggu, Lige; Wang, Liguo | Membranes | 2022 Jul 31 | 36005673 | |
| RASA2 ablation in T cells boosts antigen sensitivity and long-term function. | Carnevale, Julia; Shifrut, Eric; Kale, Nupura; Nyberg, William A; Blaeschke, Franziska; Chen, Yan Yi; Li, Zhongmei; Bapat, Sagar P; Diolaiti, Morgan E; O'Leary, Patrick; Vedova, Shane; Belk, Julia; Daniel, Bence; Roth, Theodore L; Bachl, Stefanie; Anido, Alejandro Allo; Prinzing, Brooke; Ibañez-Vega, Jorge; Lange, Shannon; Haydar, Dalia; Luetke-Eversloh, Marie; Born-Bony, Maelys; Hegde, Bindu; Kogan, Scott; Feuchtinger, Tobias; Okada, Hideho; Satpathy, Ansuman T; Shannon, Kevin; Gottschalk, Stephen; Eyquem, Justin; Krenciute, Giedre; Ashworth, Alan; Marson, Alexander | Nature | 2022 09 | 36002574 | |
| Stem cell therapy for central nervous system disorders: Metabolic interactions between transplanted cells and local microenvironments. | Sakowski, Stacey A; Chen, Kevin S | Neurobiology of disease | 2022 10 15 | 35988874 | |
| Shared and Distinctive Neighborhoods of Emerin and Lamin B Receptor Revealed by Proximity Labeling and Quantitative Proteomics. | Cheng, Li-Chun; Zhang, Xi; Abhinav, Kanishk; Nguyen, Julie A; Baboo, Sabyasachi; Martinez-Bartolomé, Salvador; Branon, Tess C; Ting, Alice Y; Loose, Esther; Yates 3rd, John R; Gerace, Larry | Journal of proteome research | 2022 Sep 02 | 35972904 | |
| Machine learning in postgenomic biology and personalized medicine. | Ray, Animesh | Wiley interdisciplinary reviews. Data mining and knowledge discovery | 2022 Mar-Apr | 35966173 | |
| A Bcl6 Intronic Element Regulates T Follicular Helper Cell Differentiation. | Lai, Chen-Yen; Marcel, Nimi; Yaldiko, Allen W; Delpoux, Arnaud; Hedrick, Stephen M | Journal of immunology (Baltimore, Md. : 1950) | 2022 Aug 10 | 35948398 | |
| A genetic model for in vivo proximity labelling of the mammalian secretome. | Yang, Rui; Meyer, Amanda S; Droujinine, Ilia A; Udeshi, Namrata D; Hu, Yanhui; Guo, Jinjin; McMahon, Jill A; Carey, Dominique K; Xu, Charles; Fang, Qiao; Sha, Jihui; Qin, Shishang; Rocco, David; Wohlschlegel, James; Ting, Alice Y; Carr, Steven A; Perrimon, Norbert; McMahon, Andrew P | Open biology | 2022 08 | 35946312 | |
| A conserved Bacteroidetes antigen induces anti-inflammatory intestinal T lymphocytes. | Bousbaine, Djenet; Fisch, Laura I; London, Mariya; Bhagchandani, Preksha; Rezende de Castro, Tiago B; Mimee, Mark; Olesen, Scott; Reis, Bernardo S; VanInsberghe, David; Bortolatto, Juliana; Poyet, Mathilde; Cheloha, Ross W; Sidney, John; Ling, Jingjing; Gupta, Aaron; Lu, Timothy K; Sette, Alessandro; Alm, Eric J; Moon, James J; Victora, Gabriel D; Mucida, Daniel; Ploegh, Hidde L; Bilate, Angelina M | Science (New York, N.Y.) | 2022 08 05 | 35926021 | |
| Association of race/ethnicity with mortality in patients hospitalized with COVID-19. | Richardson, Safiya; Martinez, Johanna; Hirsch, Jamie S; Cerise, Jane; Lesser, Martin; Roswell, Robert O; Davidson, Karina W; Northwell Health COVID-19 Research Consortium | PloS one | 2022 | 35925973 | |
| A Novel EGFRvIII T-Cell Bispecific Antibody for the Treatment of Glioblastoma. | Iurlaro, Raffaella; Waldhauer, Inja; Planas-Rigol, Ester; Bonfill-Teixidor, Ester; Arias, Alexandra; Nicolini, Valeria; Freimoser-Grundschober, Anne; Cuartas, Isabel; Martínez-Moreno, Alba; Martínez-Ricarte, Francisco; Cordero, Esteban; Cicuendez, Marta; | Molecular cancer therapeutics | 2022 10 07 | 35915983 | |
| Differential richness inference for 16S rRNA marker gene surveys. | Kumar, M Senthil; Slud, Eric V; Hehnly, Christine; Zhang, Lijun; Broach, James; Irizarry, Rafael A; Schiff, Steven J; Paulson, Joseph N | Genome biology | 2022 Aug 01 | 35915508 | |
| Myeloperoxidase as a Marker to Differentiate Mouse Monocyte/Macrophage Subsets. | Gurski, Cody J; Dittel, Bonnie N | International journal of molecular sciences | 2022 Jul 26 | 35897821 | |
| Engineering Modular 3D Liver Culture Microenvironments In Vitro to Parse the Interplay between Biophysical and Biochemical Microenvironment Cues on Hepatic Phenotypes. | Wang, Alex J; Allen, Allysa; Sofman, Marianna; Sphabmixay, Pierre; Yildiz, Ece; Griffith, Linda G | Advanced nanobiomed research | 2022 Jan | 35872804 | |
| Control of nuclear size by osmotic forces in Schizosaccharomyces pombe. | Lemière, Joël; Real-Calderon, Paula; Holt, Liam J; Fai, Thomas G; Chang, Fred | eLife | 2022 Jul 20 | 35856499 | |
| Molecular View into Preferential Binding of the Factor VII Gla Domain to Phosphatidic Acid. | Muller, Melanie P; Morrissey, James H; Tajkhorshid, Emad | Biochemistry | 2022 08 16 | 35853076 | |
| Nanoarchitecture and molecular interactions of epithelial cell junction proteins revealed by super-resolution microscopy. | Naser, Amna N; Guiler, William; Lu, Qun; Chen, Yan-Hua | Annals of the New York Academy of Sciences | 2022 Jul 12 | 35819053 | |
| Tissue-resident memory and circulating T cells are early responders to pre-surgical cancer immunotherapy. | Luoma, Adrienne M; Suo, Shengbao; Wang, Yifan; Gunasti, Lauren; Porter, Caroline B M; Nabilsi, Nancy; Tadros, Jenny; Ferretti, Andrew P; Liao, Sida; Gurer, Cagan; Chen, Yu-Hui; Criscitiello, Shana; Ricker, Cora A; Dionne, Danielle; Rozenblatt-Rosen, Orit; | Cell | 2022 Aug 04 | 35803260 | |
| Applications and Limitations of Oxime-Linked "Split PROTACs". | Gui, Weijun; Kodadek, Thomas | Chembiochem : a European journal of chemical biology | 2022 Jul 08 | 35802347 | |
| HDACs regulate the differentiation of endothelial cells from human iPSCs. | Li, Tao; Wu, Haopeng; Wang, Pingping; Kim, Amy M; Jia, Junjing; Nolta, Jan A; Zhou, Ping | Cell biochemistry and function | 2022 Jul 05 | 35789099 | |
| Isolation and Processing of Murine White Adipocytes for Transcriptome and Epigenome Analyses. | Yang, Chih-Hsiang; Longinotto, John; Panzeri, Ilaria; Arrigoni, Laura; Wegert, Vanessa; Heyne, Steffen; Seifert, Gabriel; Lempradl, Adelheid; Bönisch, Ulrike; Pospisilik, John Andrew | Journal of visualized experiments : JoVE | 2022 06 16 | 35786676 | |
| A natural fusion of flavodiiron, rubredoxin, and rubredoxin oxidoreductase domains is a self-sufficient water-forming oxidase of Trichomonas vaginalis. | Abdulaziz, Evana N; Bell, Tristan A; Rashid, Bazlur; Heacock, Mina L; Begic, Tarik; Skinner, Owen S; Yaseen, Mohammad A; Chao, Luke H; Mootha, Vamsi K; Pierik, Antonio J; Cracan, Valentin | The Journal of biological chemistry | 2022 08 | 35780837 | |
| Conservation and divergence of cortical cell organization in human and mouse revealed by MERFISH. | Fang, Rongxin; Xia, Chenglong; Close, Jennie L; Zhang, Meng; He, Jiang; Huang, Zhengkai; Halpern, Aaron R; Long, Brian; Miller, Jeremy A; Lein, Ed S; Zhuang, Xiaowei | Science (New York, N.Y.) | 2022 07 | 35771910 | |
| Posttranslational modifications optimize the ability of SARS-CoV-2 spike for effective interaction with host cell receptors. | Kapoor, Karan; Chen, Tianle; Tajkhorshid, Emad | Proceedings of the National Academy of Sciences of the United States of America | 2022 Jul 12 | 35737823 | |
| PET/CT imaging of CSF1R in a mouse model of tuberculosis. | Foss, Catherine A; Ordonez, Alvaro A; Naik, Ravi; Das, Deepankar; Hall, Andrew; Wu, Yunkou; Dannals, Robert F; Jain, Sanjay K; Pomper, Martin G; Horti, Andrew G | European journal of nuclear medicine and molecular imaging | 2022 Jun 17 | 35713665 | |
| Systematically quantifying morphological features reveals constraints on organoid phenotypes. | Beck, Lauren E; Lee, Jasmine; Coté, Christopher; Dunagin, Margaret C; Lukonin, Ilya; Salla, Nikkita; Chang, Marcello K; Hughes, Alex J; Mornin, Joseph D; Gartner, Zev J; Liberali, Prisca; Raj, Arjun | Cell systems | 2022 Jul 20 | 35705097 | |
| Live analysis of position-effect variegation in Drosophila reveals different modes of action for HP1a and Su(var)3-9. | Bughio, Farah J; Maggert, Keith A | Proceedings of the National Academy of Sciences of the United States of America | 2022 06 21 | 35704756 | |
| Neuroligin-3 confines AMPA receptors into nanoclusters, thereby controlling synaptic strength at the calyx of Held synapses. | Han, Ying; Cao, Ran; Qin, Liming; Chen, Lulu Y; Tang, Ai-Hui; Südhof, Thomas C; Zhang, Bo | Science advances | 2022 Jun 17 | 35704570 | |
| mirTarRnaSeq: An R/Bioconductor Statistical Package for miRNA-mRNA Target Identification and Interaction Analysis. | Movassagh, Mercedeh; Morton, Sarah U; Hehnly, Christine; Smith, Jasmine; Doan, Trang T; Irizarry, Rafael; Broach, James R; Schiff, Steven J; Bailey, Jeffrey A; Paulson, Joseph N | BMC genomics | 2022 Jun 13 | 35698050 | |
| Orgo-Seq integrates single-cell and bulk transcriptomic data to identify cell type specific-driver genes associated with autism spectrum disorder. | Lim, Elaine T; Chan, Yingleong; Dawes, Pepper; Guo, Xiaoge; Erdin, Serkan; Tai, Derek J C; Liu, Songlei; Reichert, Julia M; Burns, Mannix J; Chan, Ying Kai; Chiang, Jessica J; Meyer, Katharina; Zhang, Xiaochang; Walsh, Christopher A; Yankner, Bruce A; Raychaudhuri, Soumya; Hirschhorn, Joel N; Gusella, James F; Talkowski, Michael E; Church, George M | Nature communications | 2022 06 10 | 35688811 | |
| Active genetics comes alive: Exploring the broad applications of CRISPR-based selfish genetic elements (or gene-drives): Exploring the broad applications of CRISPR-based selfish genetic elements (or gene-drives). | Gantz, Valentino M; Bier, Ethan | BioEssays : news and reviews in molecular, cellular and developmental biology | 2022 08 | 35686327 | |
| Accumulation of endosymbiont genomes in an insect autosome followed by endosymbiont replacement. | Tvedte, Eric S; Gasser, Mark; Zhao, Xuechu; Tallon, Luke J; Sadzewicz, Lisa; Bromley, Robin E; Chung, Matthew; Mattick, John; Sparklin, Benjamin C; Dunning Hotopp, Julie C | Current biology : CB | 2022 Jun 20 | 35671755 | |
| Induction of synapse formation by de novo neurotransmitter synthesis. | Burlingham, Scott R; Wong, Nicole F; Peterkin, Lindsay; Lubow, Lily; Dos Santos Passos, Carolina; Benner, Orion; Ghebrial, Michael; Cast, Thomas P; Xu-Friedman, Matthew A; Südhof, Thomas C; Chanda, Soham | Nature communications | 2022 06 01 | 35650274 | |
| Laser particle activated cell sorting in microfluidics. | Dannenberg, Paul H; Kang, Jisoo; Martino, Nicola; Kashiparekh, Anokhi; Forward, Sarah; Wu, Jiamin; Liapis, Andreas C; Wang, Jie; Yun, Seok-Hyun | Lab on a chip | 2022 06 14 | 35621381 | |
| Transcription factor Acj6 controls dendrite targeting via a combinatorial cell-surface code. | Xie, Qijing; Li, Jiefu; Li, Hongjie; Udeshi, Namrata D; Svinkina, Tanya; Orlin, Daniel; Kohani, Sayeh; Guajardo, Ricardo; Mani, D R; Xu, Chuanyun; Li, Tongchao; Han, Shuo; Wei, Wei; Shuster, S Andrew; Luginbuhl, David J; Quake, Stephen R; Murthy, Swetha E; Ting, Alice Y; Carr, Steven A; Luo, Liqun | Neuron | 2022 Jul 20 | 35613619 | |
| Relating18F-FDG image signal-to-noise ratio to time-of-flight noise-equivalent count rate in total-body PET using the uEXPLORER scanner. | Leung, Edwin K; Abdelhafez, Yasser G; Berg, Eric; Xie, Zhaoheng; Zhang, Xuezhu; Bayerlein, Reimund; Spencer, Benjamin; Li, Elizabeth; Omidvari, Negar; Selfridge, Aaron; Cherry, Simon R; Qi, Jinyi; Badawi, Ramsey D | Physics in medicine and biology | 2022 06 10 | 35609588 | |
| Under the magnifying glass: The ups and downs of rDNA copy number. | Kindelay, Selina M; Maggert, Keith A | Seminars in cell & developmental biology | 2022 May 18 | 35595601 | |
| Total-Body 18F-FDG PET/CT in Autoimmune Inflammatory Arthritis at Ultra-Low Dose: Initial Observations. | Abdelhafez, Yasser; Raychaudhuri, Siba P; Mazza, Dario; Sarkar, Soumajyoti; Hunt, Heather L; McBride, Kristin; Nguyen, Mike; Caudle, Denise T; Spencer, Benjamin A; Omidvari, Negar A; Bang, Heejung; Cherry, Simon R; Nardo, Lorenzo; Badawi, Ramsey Derek; Chaudhari, Abhijit J | Journal of nuclear medicine : official publication, Society of Nuclear Medicine | 2022 May 19 | 35589405 | |
| Efficient transgenesis and homology-directed gene targeting in monolayers of primary human small intestinal and colonic epithelial stem cells. | Breau, Keith A; Ok, Meryem T; Gomez-Martinez, Ismael; Burclaff, Joseph; Kohn, Nathan P; Magness, Scott T | Stem cell reports | 2022 Apr 25 | 35523179 | |
| Cortical basis for skilled vocalization. | Cerkevich, Christina M; Rathelot, Jean-Alban; Strick, Peter L | Proceedings of the National Academy of Sciences of the United States of America | 2022 May 10 | 35507879 | |
| A planar culture model of human absorptive enterocytes reveals metformin increases fatty acid oxidation and export. | Gomez-Martinez, Ismael; Bliton, R Jarrett; Breau, Keith A; Czerwinski, Michael J; Williamson, Ian A; Wen, Jia; Rawls, John F; Magness, Scott T | Cellular and molecular gastroenterology and hepatology | 2022 Apr 27 | 35489715 | |
| Functional genetic screen identifies ITPR3/calcium/RELB axis as a driver of colorectal cancer metastatic liver colonization. | Moy, Ryan H; Nguyen, Alexander; Loo, Jia Min; Yamaguchi, Norihiro; Kajba, Christina M; Santhanam, Balaji; Ostendorf, Benjamin N; Wu, Y Gloria; Tavazoie, Saeed; Tavazoie, Sohail F | Developmental cell | 2022 05 09 | 35487218 | |
| The Giardia ventrolateral flange is a lamellar membrane protrusion that supports attachment. | Hardin, William R; Alas, Germain C M; Taparia, Nikita; Thomas, Elizabeth B; Steele-Ogus, Melissa C; Hvorecny, Kelli L; Halpern, Aaron R; Tůmová, Pavla; Kollman, Justin M; Vaughan, Joshua C; Sniadecki, Nathan J; Paredez, Alexander R | PLoS pathogens | 2022 Apr | 35482847 | |
| Genomewide CRISPR knockout screen identified PLAC8 as an essential factor for SADS-CoVs infection. | Tse, Longping V; Meganck, Rita M; Araba, Kenza C; Yount, Boyd L; Shaffer, Kendall M; Hou, Yixuan J; Munt, Jennifer E; Adams, Lily E; Wykoff, Jason A; Morowitz, Jeremy M; Dong, Stephanie; Magness, Scott T; Marzluff, William F; Gonzalez, Liara M; Ehre, Camille; Baric, Ralph S | Proceedings of the National Academy of Sciences of the United States of America | 2022 May 03 | 35476513 | |
| Structural and functional impact by SARS-CoV-2 Omicron spike mutations. | Zhang, Jun; Cai, Yongfei; Lavine, Christy L; Peng, Hanqin; Zhu, Haisun; Anand, Krishna; Tong, Pei; Gautam, Avneesh; Mayer, Megan L; Rits-Volloch, Sophia; Wang, Shaowei; Sliz, Piotr; Wesemann, Duane R; Yang, Wei; Seaman, Michael S; Lu, Jianming; Xiao, Tianshu; Chen, Bing | Cell reports | 2022 04 26 | 35452593 | |
| Central memory T cells are the most effective precursors of resident memory T cells in human skin. | Matos, Tiago R; Gehad, Ahmed; Teague, Jessica E; Dyring-Andersen, Beatrice; Benezeder, Theresa; Dowlatshahi, Mitra; Crouch, Jack; Watanabe, Yoshinori; O'Malley, John T; Kupper, Thomas S; Yang, Chao; Watanabe, Rei; Clark, Rachael A | Science immunology | 2022 04 22 | 35452256 | |
| Circadian disruption of hippocampus in an early senescence male mouse model. | Davis, Jennifer A; Paul, Jodi R; Mokashi, Mugdha V; Yates, Stefani A; Mount, Daniel J; Munir, Hira A; Goode, Lacy K; Young, Martin E; Allison, David B; Gamble, Karen L | Pharmacology, biochemistry, and behavior | 2022 06 | 35447158 | |
| Three Mutations Convert the Selectivity of a Protein Sensor from Nicotinic Agonists to S-Methadone for Use in Cells, Organelles, and Biofluids. | Muthusamy, Anand K; Kim, Charlene H; Virgil, Scott C; Knox, Hailey J; Marvin, Jonathan S; Nichols, Aaron L; Cohen, Bruce N; Dougherty, Dennis A; Looger, Loren L; Lester, Henry A | Journal of the American Chemical Society | 2022 05 18 | 35446570 | |
| TRPV4: En RhoA To a Cure? | Lu, Qun; Chen, Yan-Hua | BioEssays : news and reviews in molecular, cellular and developmental biology | 2022 06 | 35441721 | |
| Hippo Signaling Pathway Activation during SARS-CoV-2 Infection Contributes to Host Antiviral Response. | Garcia, Gustavo; Wang, Yijie; Irudayam, Joseph Ignatius; Jeyachandran, Arjit Vijey; Cario, Sebastian Castillo; Sen, Chandani; Li, Shen; Li, Yunfeng; Kumar, Ashok; Nielsen-Saines, Karin; French, Samuel W; Shah, Priya S; Morizono, Kouki; Gomperts, Brigitte; Deb, Arjun; Ramaiah, Arunachalam; Arumugaswami, Vaithilingaraja | bioRxiv : the preprint server for biology | 2022 Apr 08 | 35441167 | |
| Tuning the Sensitivity of Genetically Encoded Fluorescent Potassium Indicators through Structure-Guided and Genome Mining Strategies. | Torres Cabán, Cristina C; Yang, Minghan; Lai, Cuixin; Yang, Lina; Subach, Fedor V; Smith, Brian O; Piatkevich, Kiryl D; Boyden, Edward S | ACS sensors | 2022 05 27 | 35427452 | |
| Ligand-receptor promiscuity enables cellular addressing. | Su, Christina J; Murugan, Arvind; Linton, James M; Yeluri, Akshay; Bois, Justin; Klumpe, Heidi; Langley, Matthew A; Antebi, Yaron E; Elowitz, Michael B | Cell systems | 2022 05 18 | 35421362 | |
| The context-dependent, combinatorial logic of BMP signaling. | Klumpe, Heidi E; Langley, Matthew A; Linton, James M; Su, Christina J; Antebi, Yaron E; Elowitz, Michael B | Cell systems | 2022 May 18 | 35421361 | |
| Rational Design of Silicon-Based Zinc Ionophores. | Yamada, Kei; Deb, Arghya; Shoba, Veronika M; Lim, Donghyun; Maji, Basudeb; Modell, Ashley E; Choudhary, Amit | Angewandte Chemie (International ed. in English) | 2022 Jun 07 | 35385189 | |
| Cell type determination for cardiac differentiation occurs soon after seeding of human-induced pluripotent stem cells. | Jiang, Connie L; Goyal, Yogesh; Jain, Naveen; Wang, Qiaohong; Truitt, Rachel E; Coté, Allison J; Emert, Benjamin; Mellis, Ian A; Kiani, Karun; Yang, Wenli; Jain, Rajan; Raj, Arjun | Genome biology | 2022 Apr 05 | 35382863 | |
| Distance-dependent resonance energy transfer in alkyl-terminated Si nanocrystal solids. | Li, Zhaohan; Robinson, Zachary L; Elvati, Paolo; Violi, Angela; Kortshagen, Uwe R | The Journal of chemical physics | 2022 Mar 28 | 35364875 | |
| The tumour-associated microbiome. | Johnston, Christopher D; Bullman, Susan | Nature reviews. Gastroenterology & hepatology | 2022 06 | 35361914 | |
| Co-evolution of interacting proteins through non-contacting and non-specific mutations. | Ding, David; Green, Anna G; Wang, Boyuan; Lite, Thuy-Lan Vo; Weinstein, Eli N; Marks, Debora S; Laub, Michael T | Nature ecology & evolution | 2022 May | 35361892 | |
| Planar Laser Activated Neuronal Scanning (PLANS) System for in vivo Flow Cytometry. | Watson, Nicholas; Mondal, Sudip; DuPlissis, Andrew; Kim, Ki Hyun; Ben-Yakar, Adela | Frontiers in optics. Annual Meeting of the Optical Society of America | 2020 Sep | 35350105 | |
| Emerging insights into the complex genetics and pathophysiology of amyotrophic lateral sclerosis. | Goutman, Stephen A; Hardiman, Orla; Al-Chalabi, Ammar; Chió, Adriano; Savelieff, Masha G; Kiernan, Matthew C; Feldman, Eva L | The Lancet. Neurology | 2022 05 | 35334234 | |
| Recent advances in the diagnosis and prognosis of amyotrophic lateral sclerosis. | Goutman, Stephen A; Hardiman, Orla; Al-Chalabi, Ammar; Chió, Adriano; Savelieff, Masha G; Kiernan, Matthew C; Feldman, Eva L | The Lancet. Neurology | 2022 05 | 35334233 | |
| COVID-19 and the HIV continuum in people living with HIV enrolled in Collaborating Consortium of Cohorts Producing NIDA Opportunities (C3PNO) cohorts. | Lesko, Catherine R; Keruly, Jeanne C; Moore, Richard D; Shen, Nicola M; Pytell, Jarratt D; Lau, Bryan; Fojo, Anthony T; Mehta, Shruti H; Kipke, Michele; Baum, Marianna K; Shoptaw, Steven; Gorbach, Pamina M; Mustanski, Brian; Javanbakht, Marjan; Siminski, Suzanne; Chander, Geetanjali | Drug and alcohol dependence | 2022 Feb 12 | 35331581 | |
| ExCel: Super-Resolution Imaging of C. elegans with Expansion Microscopy. | Yu, Chih-Chieh Jay; Orozco Cosio, Danielle M; Boyden, Edward S | Methods in molecular biology (Clifton, N.J.) | 2022 | 35320565 | |
| Bite-size introduction to canine hematologic malignancies. | Atherton, Matthew J; Mason, Nicola J | Blood advances | 2022 07 12 | 35316831 | |
| Optogenetic Stimulation of Midbrain Dopamine Neurons Produces Striatal Serotonin Release. | Dagher, Merel; Perrotta, Katie A; Erwin, Sara A; Hachisuka, Ayaka; Iyer, Rahul; Masmanidis, Sotiris C; Yang, Hongyan; Andrews, Anne M | ACS chemical neuroscience | 2022 04 06 | 35312275 | |
| ABCDs of the Relative Contributions of Pseudomonas aeruginosa Quorum Sensing Systems to Virulence in Diverse Nonvertebrate Hosts. | Vasquez-Rifo, Alejandro; Cook, Jamie; McEwan, Deborah L; Shikara, Dania; Ausubel, Frederick M; Di Cara, Francesca; Cheng, Zhenyu | mBio | 2022 04 26 | 35311532 | |
| Xist spatially amplifies SHARP/SPEN recruitment to balance chromosome-wide silencing and specificity to the X chromosome. | Jachowicz, Joanna W; Strehle, Mackenzie; Banerjee, Abhik K; Blanco, Mario R; Thai, Jasmine; Guttman, Mitchell | Nature structural & molecular biology | 2022 Mar | 35301492 | |
| Barriers to and Facilitators for Acceptance of Comprehensive Clinical Decision Support System-Driven Care Maps for Patients With Thoracic Trauma: Interview Study Among Health Care Providers and Nurses. | Jones, Emma K; Banks, Alyssa; Melton, Genevieve B; Porta, Carolyn M; Tignanelli, Christopher J | JMIR human factors | 2022 Mar 16 | e29019 | 35293873 |
| Spatial CRISPR genomics identifies regulators of the tumor microenvironment. | Dhainaut, Maxime; Rose, Samuel A; Akturk, Guray; Wroblewska, Aleksandra; Nielsen, Sebastian R; Park, Eun Sook; Buckup, Mark; Roudko, Vladimir; Pia, Luisanna; Sweeney, Robert; Le Berichel, Jessica; Wilk, C Matthias; Bektesevic, Anela; Lee, Brian H; Bhardwaj, Nina; Rahman, Adeeb H; Baccarini, Alessia; Gnjatic, Sacha; Pe'er, Dana; Merad, Miriam; Brown, Brian D | Cell | 2022 Mar 31 | 35290801 | |
| Social reactivation of fear engrams enhances memory recall. | Finkelstein, Abby Basya; Leblanc, Héloïse; Cole, Rebecca H; Gallerani, Troy; Vieira, Anahita; Zaki, Yosif; Ramirez, Steve | Proceedings of the National Academy of Sciences of the United States of America | 2022 Mar 22 | 35286206 | |
| Total-body PET/CT - First Clinical Experiences and Future Perspectives. | Ng, Quinn Kwan-Tai; Triumbari, Elizabeth Katherine Anna; Omidvari, Negar; Cherry, Simon R; Badawi, Ramsey D; Nardo, Lorenzo | Seminars in nuclear medicine | 2022 May | 35272853 | |
| Complete Genome Sequence of Morganella morganii CTX51T, Isolated from a Human Cecal Adenocarcinoma. | Stepanovica, Marija; Zepeda-Rivera, Martha A; McGlinchey, Adam S; Baryiames, Alexander A; Jones, Dakota S; LaCourse, Kaitlyn D; Bullman, Susan; Johnston, Christopher D | Microbiology resource announcements | 2022 Apr 21 | 35254123 | |
| Use of liquid lithography to form in vitro intestinal crypts with varying microcurvature surrounding the stem cell niche. | Logan Howard, R; Wang, Yuli; Allbritton, Nancy L | Journal of micromechanics and microengineering : structures, devices, and systems | 2021 Dec | 35241878 | |
| Synthetic mammalian signaling circuits for robust cell population control. | Ma, Yitong; Budde, Mark W; Mayalu, Michaëlle N; Zhu, Junqin; Lu, Andrew C; Murray, Richard M; Elowitz, Michael B | Cell | 2022 Mar 17 | 35235768 | |
| Complete Genome Sequence of Clostridium cadaveris IFB3C5, Isolated from a Human Colonic Adenocarcinoma. | McGlinchey, Adam S; Zepeda-Rivera, Martha A; Stepanovica, Marija; Baryiames, Alexander A; Jones, Dakota S; LaCourse, Kaitlyn D; Bullman, Susan; Johnston, Christopher D | Microbiology resource announcements | 2022 Mar 17 | 35234492 | |
| Emerging strategies for engineering Escherichia coli Nissle 1917-based therapeutics. | Lynch, Jason P; Goers, Lisa; Lesser, Cammie F | Trends in pharmacological sciences | 2022 Feb 26 | 35232591 | |
| Physical properties of the cytoplasm modulate the rates of microtubule polymerization and depolymerization. | Molines, Arthur T; Lemière, Joël; Gazzola, Morgan; Steinmark, Ida Emilie; Edrington, Claire H; Hsu, Chieh-Ting; Real-Calderon, Paula; Suhling, Klaus; Goshima, Gohta; Holt, Liam J; Thery, Manuel; Brouhard, Gary J; Chang, Fred | Developmental cell | 2022 02 28 | 35231427 | |
| Prophylactic (R,S)-Ketamine Is Effective Against Stress-Induced Behaviors in Adolescent but Not Aged Mice. | Mastrodonato, Alessia; Pavlova, Ina; Kee, Noelle C; Pham, Van Anh; McGowan, Josephine C; Mann, J John; Denny, Christine A | The international journal of neuropsychopharmacology | 2022 06 21 | 35229871 | |
| Expanding Knowledge and Changing Attitudes About Poverty: An Interactive, Interprofessional Approach. | Marrast, Lyndonna M; Chim, Christine; Tocco, Jack; Coletti, Daniel J; Nouryan, Christian; Block, Lauren; Martinez, Johanna | Journal of primary care & community health | 2022 Jan-Dec | 35225052 | |
| Mortality of Mechanically Ventilated COVID-19 Patients in Traditional versus Expanded Intensive Care Units in New York. | Nishikimi, Mitsuaki; Jafari, Daniel; Singh, Neha; Shinozaki, Koichiro; Sison, Cristina P; Shoaib, Muhammad; Gong, Jonathan; Rasul, Rehana; Li, Timmy; Hayashida, Kei; Rolston, Daniel M; Miyara, Santiago J; Hirsch, Jamie S; Gandomi, Amir; White, Maureen T; Jarrett, Mark P; Lesser, Martin L; Becker, Lance B; Northwell Health COVID-19 Research Consortium | Annals of the American Thoracic Society | 2022 Aug | 35213292 | |
| Synthesis and Screening of a DNA-Encoded Library of Non-Peptidic Macrocycles. | Koesema, Eric; Roy, Animesh; Paciaroni, Nicholas G; Coito, Carlos; Tokmina-Roszyk, Michal; Kodadek, Thomas | Angewandte Chemie (International ed. in English) | 2022 Feb 22 | 35192245 | |
| A Proximal-to-Distal Survey of Healthy Adult Human Small Intestine and Colon Epithelium by Single-Cell Transcriptomics. | Burclaff, Joseph; Bliton, R Jarrett; Breau, Keith A; Ok, Meryem T; Gomez-Martinez, Ismael; Ranek, Jolene S; Bhatt, Aadra P; Purvis, Jeremy E; Woosley, John T; Magness, Scott T | Cellular and molecular gastroenterology and hepatology | 2022 | 35176508 | |
| Repairing the blood-brain barrier. | McMahon, Andrew P; Ichida, Justin K | Science (New York, N.Y.) | 2022 02 18 | 35175806 | |
| Ataxia-linked SLC1A3 mutations alter EAAT1 chloride channel activity and glial regulation of CNS function. | Wu, Qianyi; Akhter, Azman; Pant, Shashank; Cho, Eunjoo; Zhu, Jin Xin; Garner, Alastair; Ohyama, Tomoko; Tajkhorshid, Emad; van Meyel, Donald J; Ryan, Renae M | The Journal of clinical investigation | 2022 Apr 01 | 35167492 | |
| Cytomegalovirus Infections in Ugandan Infants: Newborn-Mother Pairs, Neonates with Sepsis, and Infants with Hydrocephalus. | Hehnly, Christine; Ssentongo, Paddy; Bebell, Lisa M; Burgoine, Kathy; Bazira, Joel; Fronterre, Claudio; Kumbakumba, Elias; Mulondo, Ronald; Mbabazi-Kabachelor, Edith; Morton, Sarah U; Ngonzi, Joseph; Ochora, Moses; Olupot-Olupot, Peter; Onen, Justin; Robe | International journal of infectious diseases : IJID : official publication of the International Society for Infectious Diseases | 2022 Feb 09 | 35150915 | |
| SWI/SNF senses carbon starvation with a pH-sensitive low-complexity sequence. | Gutierrez, J Ignacio; Brittingham, Gregory P; Karadeniz, Yonca; Tran, Kathleen D; Dutta, Arnob; Holehouse, Alex S; Peterson, Craig L; Holt, Liam J | eLife | 2022 Feb 07 | 35129437 | |
| Identification of structural transitions in bacterial fatty acid binding proteins that permit ligand entry and exit at membranes. | Gullett, Jessica M; Cuypers, Maxime G; Grace, Christy R; Pant, Shashank; Subramanian, Chitra; Tajkhorshid, Emad; Rock, Charles O; White, Stephen W | The Journal of biological chemistry | 2022 Feb 03 | 35122790 | |
| Harnessing the microbiome to restore immunotherapy response. | Bullman, Susan; Eggermont, Alexander; Johnston, Christopher D; Zitvogel, Laurence | Nature cancer | 2021 Dec | 35121929 | |
| Fluorescent labeling of abundant reactive entities (FLARE) for cleared-tissue and super-resolution microscopy. | Lee, Min Yen; Mao, Chenyi; Glaser, Adam K; Woodworth, Marcus A; Halpern, Aaron R; Ali, Adilijiang; Liu, Jonathan T C; Vaughan, Joshua C | Nature protocols | 2022 Mar | 35110740 | |
| Membrane Mixer: A Toolkit for Efficient Shuffling of Lipids in Heterogeneous Biological Membranes. | Licari, Giuseppe; Dehghani-Ghahnaviyeh, Sepehr; Tajkhorshid, Emad | Journal of chemical information and modeling | 2022 Feb 28 | 35104125 | |
| RNA sequencing-based screen for reactivation of silenced alleles of autosomal genes. | Gupta, Saumya; Lafontaine, Denis L; Vigneau, Sebastien; Mendelevich, Asia; Vinogradova, Svetlana; Igarashi, Kyomi J; Bortvin, Andrew; Alves-Pereira, Clara F; Nag, Anwesha; Gimelbrant, Alexander A | G3 (Bethesda, Md.) | 2022 02 04 | 35100361 | |
| High-dose rifampin improves bactericidal activity without increased intracerebral inflammation in animal models of tuberculous meningitis. | Ruiz-Bedoya, Camilo A; Mota, Filipa; Tucker, Elizabeth W; Mahmud, Farina J; Reyes-Mantilla, Maria I; Erice, Clara; Bahr, Melissa; Flavahan, Kelly; de Jesus, Patricia; Kim, John; Foss, Catherine A; Peloquin, Charles A; Hammoud, Dima A; Ordonez, Alvaro A; Pardo, Carlos A; Jain, Sanjay K | The Journal of clinical investigation | 2022 03 15 | 35085105 | |
| Omicron's message on vaccines: Boosting begets breadth. | Wesemann, Duane R | Cell | 2022 02 03 | 35065712 | |
| FZD2 Regulates Murine Hair Follicle Function and Maintenance. | Brennan-Crispi, Donna M; Frankfurter, Maxwell; Murphy, Christina; Sheng, Emily; Xu, Mingang; Morrisey, Edward E; Millar, Sarah E; Leung, Thomas H | The Journal of investigative dermatology | 2022 Jan 17 | 35051380 | |
| Electrophysiological signatures of inhibitory control in children with Tourette syndrome and attention-deficit/hyperactivity disorder. | Morand-Beaulieu, Simon; Smith, Stephanie D; Ibrahim, Karim; Wu, Jia; Leckman, James F; Crowley, Michael J; Sukhodolsky, Denis G | Cortex; a journal devoted to the study of the nervous system and behavior | 2022 Feb | 35042055 | |
| Regional synapse gain and loss accompany memory formation in larval zebrafish. | Dempsey, William P; Du, Zhuowei; Nadtochiy, Anna; Smith, Colton D; Czajkowski, Karl; Andreev, Andrey; Robson, Drew N; Li, Jennifer M; Applebaum, Serina; Truong, Thai V; Kesselman, Carl; Fraser, Scott E; Arnold, Don B | Proceedings of the National Academy of Sciences of the United States of America | 2022 01 18 | 35031564 | |
| "Fix and Click" for Assay of Sphingolipid Signaling in Single Primary Human Intestinal Epithelial Cells. | Gallion, Luke A; Wang, Yuli; Massaro, Angelo; Yao, Ming; Petersen, Brae V; Zhang, Quanzheng; Huang, Weigang; Carr, Adam J; Zhang, Qisheng; Allbritton, Nancy L | Analytical chemistry | 2022 Jan 25 | 1594-1600 | 35020354 |
| Water-Soluble Luminescent Silicon Nanocrystals by Plasma-Induced Acrylic Acid Grafting and PEGylation. | Li, Zhaohan; Mahajan, Advitiya; Andaraarachchi, Himashi P; Lee, Yeonjoo; Kortshagen, Uwe R | ACS applied bio materials | 2022 01 17 | 35014827 | |
| 11C-Para-aminobenzoic acid PET imaging of S. aureus and MRSA infection in preclinical models and humans. | Ordonez, Alvaro A; Parker, Matthew Fl; Miller, Robert J; Plyku, Donika; Ruiz-Bedoya, Camilo A; Tucker, Elizabeth W; Luu, Justin M; Dikeman, Dustin A; Lesniak, Wojciech G; Holt, Daniel P; Dannals, Robert F; Miller, Lloyd S; Rowe, Steven P; Wilson, David M; Jain, Sanjay K | JCI insight | 2022 01 11 | 35014627 | |
| Characterization of Definitive Regulatory B Cell Subsets by Cell Surface Phenotype, Function and Context. | Neu, Savannah D; Dittel, Bonnie N | Frontiers in immunology | 2021 | 34987513 | |
| Wearable aptamer-field-effect transistor sensing system for noninvasive cortisol monitoring. | Wang, Bo; Zhao, Chuanzhen; Wang, Zhaoqing; Yang, Kyung-Ae; Cheng, Xuanbing; Liu, Wenfei; Yu, Wenzhuo; Lin, Shuyu; Zhao, Yichao; Cheung, Kevin M; Lin, Haisong; Hojaiji, Hannaneh; Weiss, Paul S; Stojanović, Milan N; Tomiyama, A Janet; Andrews, Anne M; Emaminejad, Sam | Science advances | 2022 Jan 07 | 34985954 | |
| Fluorescence activation mechanism and imaging of drug permeation with new sensors for smoking-cessation ligands. | Nichols, Aaron L; Blumenfeld, Zack; Fan, Chengcheng; Luebbert, Laura; Blom, Annet E M; Cohen, Bruce N; Marvin, Jonathan S; Borden, Philip M; Kim, Charlene H; Muthusamy, Anand K; Shivange, Amol V; Knox, Hailey J; Campello, Hugo Rego; Wang, Jonathan H; Dougherty, Dennis A; Looger, Loren L; Gallagher, Timothy; Rees, Douglas C; Lester, Henry A | eLife | 2022 01 04 | 34982029 | |
| Emerging rejuvenation strategies-Reducing the biological age. | Zhang, Bohan; Trapp, Alexandre; Kerepesi, Csaba; Gladyshev, Vadim N | Aging cell | 2022 01 | 34972247 | |
| In Silico Identification and Experimental Validation of Peptide-Based Inhibitors Targeting Clostridium difficile Toxin A. | Xiao, Xingqing; Sarma, Sudeep; Menegatti, Stefano; Crook, Nathan; Magness, Scott T; Hall, Carol K | ACS chemical biology | 2022 01 21 | 34965093 | |
| Mouse characteristics that affect establishing xenografts from hepatocellular carcinoma patient biopsies in the United States. | Zou, Chenhui; El Dika, Imane; Vercauteren, Koen O A; Capanu, Marinela; Chou, Joanne; Shia, Jinru; Pilet, Jill; Quirk, Corrine; Lalazar, Gadi; Andrus, Linda; Kabbani, Mohammad; Yaqubie, Amin; Khalil, Danny; Mergoub, Taha; Chiriboga, Luis; Rice, Charles M; Abou-Alfa, Ghassan K; de Jong, Ype P | Cancer medicine | 2022 Feb | 34951132 | |
| Meiotic Cas9 expression mediates gene conversion in the male and female mouse germline. | Weitzel, Alexander J; Grunwald, Hannah A; Weber, Ceri; Levina, Rimma; Gantz, Valentino M; Hedrick, Stephen M; Bier, Ethan; Cooper, Kimberly L | PLoS biology | 2021 12 | 34941868 | |
| FMRP regulates mRNAs encoding distinct functions in the cell body and dendrites of CA1 pyramidal neurons. | Hale, Caryn R; Sawicka, Kirsty; Mora, Kevin; Fak, John J; Kang, Jin Joo; Cutrim, Paula; Cialowicz, Katarzyna; Carroll, Thomas S; Darnell, Robert B | eLife | 2021 12 23 | 34939924 | |
| Citrobacter rodentium(ϕStx2dact), a murine infection model for enterohemorrhagic Escherichia coli. | Thorpe, Cheleste M; Pulsifer, Amanda R; Osburne, Marcia S; Vanaja, Sivapriya Kailasan; Leong, John M | Current opinion in microbiology | 2022 Feb | 34929548 | |
| Molecular self-avoidance in synaptic neurexin complexes. | Wang, Cosmos Yuqi; Trotter, Justin H; Liakath-Ali, Kif; Lee, Sung-Jin; Liu, Xinran; Südhof, Thomas C | Science advances | 2021 Dec 17 | 34919427 | |
| Systems biology analysis of human genomes points to key pathways conferring spina bifida risk. | Aguiar-Pulido, Vanessa; Wolujewicz, Paul; Martinez-Fundichely, Alexander; Elhaik, Eran; Thareja, Gaurav; Abdel Aleem, Alice; Chalhoub, Nader; Cuykendall, Tawny; Al-Zamer, Jamel; Lei, Yunping; El-Bashir, Haitham; Musser, James M; Al-Kaabi, Abdulla; Shaw, Gary M; Khurana, Ekta; Suhre, Karsten; Mason, Christopher E; Elemento, Olivier; Finnell, Richard H; Ross, M Elizabeth | Proceedings of the National Academy of Sciences of the United States of America | 2021 12 21 | 34916285 | |
| Rapid directed molecular evolution of fluorescent proteins in mammalian cells. | Babakhanova, Siranush; Jung, Erica E; Namikawa, Kazuhiko; Zhang, Hanbin; Wang, Yangdong; Subach, Oksana M; Korzhenevskiy, Dmitry A; Rakitina, Tatiana V; Xiao, Xian; Wang, Wenjing; Shi, Jing; Drobizhev, Mikhail; Park, Demian; Eisenhard, Lea; Tang, Hongyun; Köster, Reinhard W; Subach, Fedor V; Boyden, Edward S; Piatkevich, Kiryl D | Protein science : a publication of the Protein Society | 2022 03 | 34913537 | |
| Method for Inkjet-printing PEDOT:PSS polymer electrode arrays on piezoelectric PVDF-TrFE fibers. | Closson, Andrew; Richards, Haley; Xu, Zhe; Jin, Congran; Dong, Lin; Zhang, John X J | IEEE sensors journal | 2021 Dec | 34899077 | |
| Stoichiometric analysis reveals a unique phosphatidylserine binding site in coagulation factor X. | Paul, Divyani; Morrissey, James H | Journal of thrombosis and haemostasis : JTH | 2021 Dec 11 | 34894064 | |
| Fungicidal amphotericin B sponges are assemblies of staggered asymmetric homodimers encasing large void volumes. | Lewandowska, Agnieszka; Soutar, Corinne P; Greenwood, Alexander I; Nimerovsky, Evgeny; De Lio, Ashley M; Holler, Jordan T; Hisao, Grant S; Khandelwal, Anuj; Zhang, Jiabao; SantaMaria, Anna M; Schwieters, Charles D; Pogorelov, Taras V; Burke, Martin D; Rienstra, Chad M | Nature structural & molecular biology | 2021 12 | 34887566 | |
| Exercise plasma boosts memory and dampens brain inflammation via clusterin. | De Miguel, Zurine; Khoury, Nathalie; Betley, Michael J; Lehallier, Benoit; Willoughby, Drew; Olsson, Niclas; Yang, Andrew C; Hahn, Oliver; Lu, Nannan; Vest, Ryan T; Bonanno, Liana N; Yerra, Lakshmi; Zhang, Lichao; Saw, Nay Lui; Fairchild, J Kaci; Lee, Davis; Zhang, Hui; McAlpine, Patrick L; Contrepois, Kévin; Shamloo, Mehrdad; Elias, Joshua E; Rando, Thomas A; Wyss-Coray, Tony | Nature | 2021 Dec | 34880498 | |
| A Versatile Multichannel Instrument for Measurement of Ratiometric Fluorescence Intensity and Phosphorescence Lifetime. | Zavareh, Amir Tofighi; Ko, Brian; Roberts, Jason; Elahi, Sakib; McShane, Michael J | IEEE access : practical innovations, open solutions | 2021 | 34858770 | |
| Complete Genome Sequence of Arachnia rubra Strain DSM 100122T, a Cultured Member of the Human Oral Microbiome. | Ouellette, Matthew; Bejian, Andrew A; Chen, Tsute; Jones, Dakota S; Johnston, Christopher D; Dewhirst, Floyd E | Microbiology resource announcements | 2021 Dec 02 | 34854708 | |
| Prostate Cancer Risk Stratification via Nondestructive 3D Pathology with Deep Learning-Assisted Gland Analysis. | Xie, Weisi; Reder, Nicholas P; Koyuncu, Can; Leo, Patrick; Hawley, Sarah; Huang, Hongyi; Mao, Chenyi; Postupna, Nadia; Kang, Soyoung; Serafin, Robert; Gao, Gan; Han, Qinghua; Bishop, Kevin W; Barner, Lindsey A; Fu, Pingfu; Wright, Jonathan L; Keene, C Dirk; Vaughan, Joshua C; Janowczyk, Andrew; Glaser, Adam K; Madabhushi, Anant; True, Lawrence D; Liu, Jonathan T C | Cancer research | 2022 01 15 | 34853071 | |
| Dynamic PET-facilitated modeling and high-dose rifampin regimens for Staphylococcus aureus orthopedic implant-associated infections. | Gordon, Oren; Lee, Donald E; Liu, Bessie; Langevin, Brooke; Ordonez, Alvaro A; Dikeman, Dustin A; Shafiq, Babar; Thompson, John M; Sponseller, Paul D; Flavahan, Kelly; Lodge, Martin A; Rowe, Steven P; Dannals, Robert F; Ruiz-Bedoya, Camilo A; Read, Timothy D; Peloquin, Charles A; Archer, Nathan K; Miller, Lloyd S; Davis, Kimberly M; Gobburu, Jogarao V S; Jain, Sanjay K | Science translational medicine | 2021 Dec | 34851697 | |
| Inorganic-Organic Interpenetrating Network Hydrogels as Tissue-Integrating Luminescent Implants: Physicochemical Characterization and Preclinical Evaluation. | Unruh, Rachel M; Bornhoeft, Lindsey R; Nichols, Scott P; Wisniewski, Natalie A; McShane, Michael J | Macromolecular bioscience | 2022 Mar | 34847287 | |
| In vivo visualization of butterfly scale cell morphogenesis in Vanessa cardui. | McDougal, Anthony D; Kang, Sungsam; Yaqoob, Zahid; So, Peter T C; Kolle, Mathias | Proceedings of the National Academy of Sciences of the United States of America | 2021 12 07 | 34845021 | |
| Identification of a therapeutic interfering particle-A single-dose SARS-CoV-2 antiviral intervention with a high barrier to resistance. | Chaturvedi, Sonali; Vasen, Gustavo; Pablo, Michael; Chen, Xinyue; Beutler, Nathan; Kumar, Arjun; Tanner, Elizabeth; Illouz, Sylvia; Rahgoshay, Donna; Burnett, John; Holguin, Leo; Chen, Pei-Yi; Ndjamen, Blaise; Ott, Melanie; Rodick, Robert; Rogers, Thomas; | Cell | 2021 12 09 | 34838159 | |
| Plasmonic Nanoparticle Conjugation for Nucleic Acid Biosensing. | Tadimety, Amogha; Zhang, Yichen; Molinski, John H; Palinski, Timothy J; Tsongalis, Gregory J; Zhang, John X J | Methods in molecular biology (Clifton, N.J.) | 2022 | 34837175 | |
| ORAI1 Limits SARS-CoV-2 Infection by Regulating Tonic Type I IFN Signaling. | Wu, Beibei; Ramaiah, Arunachalam; Garcia Jr, Gustavo; Hasiakos, Spyridon; Arumugaswami, Vaithilingaraja; Srikanth, Sonal | Journal of immunology (Baltimore, Md. : 1950) | 2022 Jan 01 | 34819389 | |
| Implantable aptamer-field-effect transistor neuroprobes for in vivo neurotransmitter monitoring. | Zhao, Chuanzhen; Cheung, Kevin M; Huang, I-Wen; Yang, Hongyan; Nakatsuka, Nako; Liu, Wenfei; Cao, Yan; Man, Tianxing; Weiss, Paul S; Monbouquette, Harold G; Andrews, Anne M | Science advances | 2021 Nov 26 | 34818033 | |
| Cardiomyocytes disrupt pyrimidine biosynthesis in nonmyocytes to regulate heart repair. | Li, Shen; Yokota, Tomohiro; Wang, Ping; Ten Hoeve, Johanna; Ma, Feiyang; Le, Thuc M; Abt, Evan R; Zhou, Yonggang; Wu, Rimao; Nanthavongdouangsy, Maxine; Rodriguez, Abraham; Wang, Yijie; Lin, Yen-Ju; Muranaka, Hayato; Sharpley, Mark; Braddock, Demetrios T; MacRae, Vicky E; Banerjee, Utpal; Chiou, Pei-Yu; Seldin, Marcus; Huang, Dian; Teitell, Michael; Gertsman, Ilya; Jung, Michael; Bensinger, Steven J; Damoiseaux, Robert; Faull, Kym; Pellegrini, Matteo; Lusis, Aldons J; Graeber, Thomas G; Radu, Caius G; Deb, Arjun | The Journal of clinical investigation | 2022 01 18 | 34813507 | |
| Now is the time to assess the effects of open science practiceswith randomized control trials. | Suls, Jerry; Rothman, Alexander J; Davidson, Karina W | The American psychologist | 2022 Apr | 34807632 | |
| Transcription-wide mapping of dihydrouridine reveals that mRNA dihydrouridylation is required for meiotic chromosome segregation. | Finet, Olivier; Yague-Sanz, Carlo; Krüger, Lara Katharina; Tran, Phong; Migeot, Valérie; Louski, Max; Nevers, Alicia; Rougemaille, Mathieu; Sun, Jingjing; Ernst, Felix G M; Wacheul, Ludivine; Wery, Maxime; Morillon, Antonin; Dedon, Peter; Lafontaine, Denis L J; Hermand, Damien | Molecular cell | 2021 Nov 15 | 34798057 | |
| Altered cell and RNA isoform diversity in aging Down syndrome brains. | Palmer, Carter R; Liu, Christine S; Romanow, William J; Lee, Ming-Hsiang; Chun, Jerold | Proceedings of the National Academy of Sciences of the United States of America | 2021 11 23 | 34795060 | |
| Deleting DNMT3A in CAR T cells prevents exhaustion and enhances antitumor activity. | Prinzing, Brooke; Zebley, Caitlin C; Petersen, Christopher T; Fan, Yiping; Anido, Alejandro Allo; Yi, Zhongzhen; Nguyen, Phuong; Houke, Haley; Bell, Matthew; Haydar, Dalia; Brown, Charmaine; Boi, Shannon K; Alli, Shanta; Crawford, Jeremy Chase; Riberdy, Janice M; Park, Jeoungeun J; Zhou, Sheng; Velasquez, Mireya Paulina; DeRenzo, Chris; Lazzarotto, Cicera R; Tsai, Shengdar Q; Vogel, Peter; Pruett-Miller, Shondra M; Langfitt, Deanna M; Gottschalk, Stephen; Youngblood, Ben; Krenciute, Giedre | Science translational medicine | 2021 Nov 17 | 34788079 | |
| Emerging technologies and their impact on regulatory science. | Anklam, Elke; Bahl, Martin Iain; Ball, Robert; Beger, Richard D; Cohen, Jonathan; Fitzpatrick, Suzanne; Girard, Philippe; Halamoda-Kenzaoui, Blanka; Hinton, Denise; Hirose, Akihiko; Hoeveler, Arnd; Honma, Masamitsu; Hugas, Marta; Ishida, Seichi; Kass, George En; Kojima, Hajime; Krefting, Ira; Liachenko, Serguei; Liu, Yan; Masters, Shane; Marx, Uwe; McCarthy, Timothy; Mercer, Tim; Patri, Anil; Pelaez, Carmen; Pirmohamed, Munir; Platz, Stefan; Ribeiro, Alexandre Js; Rodricks, Joseph V; Rusyn, Ivan; Salek, Reza M; Schoonjans, Reinhilde; Silva, Primal; Svendsen, Clive N; Sumner, Susan; Sung, Kyung; Tagle, Danilo; Tong, Li; Tong, Weida; Eijnden-van-Raaij, Janny van den; Vary, Neil; Wang, Tao; Waterton, John; Wang, May; Wen, Hairuo; Wishart, David; Yuan, Yinyin; Slikker Jr, William | Experimental biology and medicine (Maywood, N.J.) | 2022 01 | 34783606 | |
| Three-dimensional genome organization via triplex-forming RNAs. | Farabella, Irene; Di Stefano, Marco; Soler-Vila, Paula; Marti-Marimon, Maria; Marti-Renom, Marc A | Nature structural & molecular biology | 2021 11 | 34759378 | |
| Neurological pathophysiology of SARS-CoV-2 and pandemic potential RNA viruses: a comparative analysis. | Chakravarty, Nikhil; Senthilnathan, Thrisha; Paiola, Sophia; Gyani, Priya; Castillo Cario, Sebastian; Urena, Estrella; Jeysankar, Akash; Jeysankar, Prakash; Ignatius Irudayam, Joseph; Natesan Subramanian, Sumathi; Lavretsky, Helen; Joshi, Shantanu; Garcia Jr, Gustavo; Ramaiah, Arunachalam; Arumugaswami, Vaithilingaraja | FEBS letters | 2021 Nov 10 | 34757622 | |
| Evolution of natural lifespan variation and molecular strategies of extended lifespan in yeast. | Kaya, Alaattin; Phua, Cheryl Zi Jin; Lee, Mitchell; Wang, Lu; Tyshkovskiy, Alexander; Ma, Siming; Barre, Benjamin; Liu, Weiqiang; Harrison, Benjamin R; Zhao, Xiaqing; Zhou, Xuming; Wasko, Brian M; Bammler, Theo K; Promislow, Daniel El; Kaeberlein, Matt; Gladyshev, Vadim N | eLife | 2021 11 09 | 34751131 | |
| Proximity-Labeling Reveals Novel Host and Parasite Proteins at the Toxoplasma Parasitophorous Vacuole Membrane. | Cygan, Alicja M; Jean Beltran, Pierre M; Mendoza, Alma G; Branon, Tess C; Ting, Alice Y; Carr, Steven A; Boothroyd, John C | mBio | 2021 12 21 | 34749525 | |
| Genetic re-direction of canine primary T cells for clinical trial use in pet dogs with spontaneous cancer. | Rotolo, Antonia; Atherton, Matthew J; Kasper, Brian T; Haran, Kumudhini P; Mason, Nicola J | STAR protocols | 2021 12 17 | 34746864 | |
| Enteric pathogens induce tissue tolerance and prevent neuronal loss from subsequent infections. | Ahrends, Tomasz; Aydin, Begüm; Matheis, Fanny; Classon, Cajsa H; Marchildon, François; Furtado, Gláucia C; Lira, Sérgio A; Mucida, Daniel | Cell | 2021 Nov 11 | 34717799 | |
| Identification of long-lived proteins in the mitochondria reveals increased stability of the electron transport chain. | Krishna, Shefali; Arrojo E Drigo, Rafael; Capitanio, Juliana S; Ramachandra, Ranjan; Ellisman, Mark; Hetzer, Martin W | Developmental cell | 2021 11 08 | 34715012 | |
| Telemedicine and visit completion among people with HIV during the coronavirus disease 2019 pandemic compared with prepandemic. | El-Nahal, Walid G; Shen, Nicola M; Keruly, Jeanne C; Jones, Joyce L; Fojo, Anthony T; Lau, Bryan; Manabe, Yukari C; Moore, Richard D; Gebo, Kelly A; Lesko, Catherine R; Chander, Geetanjali | AIDS (London, England) | 2022 03 01 | 34711737 | |
| Photothermal Intracellular Delivery Using Gold Nanodisk Arrays. | Zhao, Chuanzhen; Man, Tianxing; Xu, Xiaobin; Yang, Qing; Liu, Wenfei; Jonas, Steven J; Teitell, Michael A; Chiou, Pei-Yu; Weiss, Paul S | ACS materials letters | 2020 Nov 02 | 34708213 | |
| Intubated COVID-19 predictive (ICOP) score for early mortality after intubation in patients with COVID-19. | Nishikimi, Mitsuaki; Rasul, Rehana; Sison, Cristina P; Jafari, Daniel; Shoaib, Muhammad; Shinozaki, Koichiro; Li, Timmy; Hayashida, Kei; Rolston, Daniel M; Hirsch, Jamie S; Becker, Lance B; Northwell Health COVID-19 Research Consortium | Scientific reports | 2021 10 26 | 34702896 | |
| The adaptive aging brain. | Aron, Liviu; Zullo, Joseph; Yankner, Bruce A | Current opinion in neurobiology | 2021 Oct 21 | 34689041 | |
| Simultaneous serotonin and dopamine monitoring across timescales by rapid pulse voltammetry with partial least squares regression. | Movassaghi, Cameron S; Perrotta, Katie A; Yang, Hongyan; Iyer, Rahul; Cheng, Xinyi; Dagher, Merel; Fillol, Miguel Alcañiz; Andrews, Anne M | Analytical and bioanalytical chemistry | 2021 Nov | 34686897 | |
| Kit-based synthesis of 2-deoxy-2-[18F]-fluoro-D-sorbitol for bacterial imaging. | Mota, Filipa; De Jesus, Patricia; Jain, Sanjay K | Nature protocols | 2021 11 | 34686858 | |
| Gun violence incidence during the COVID-19 pandemic is higher than before the pandemic in the United States. | Ssentongo, Paddy; Fronterre, Claudio; Ssentongo, Anna E; Advani, Shailesh; Heilbrunn, Emily S; Hazelton, Joshua P; Oh, John S; McCall-Hosenfeld, Jennifer S; Chinchilli, Vernon M | Scientific reports | 2021 10 21 | 34675321 | |
| PIP2-dependent coupling of voltage sensor and pore domains in Kv7.2 channel. | Pant, Shashank; Zhang, Jiaren; Kim, Eung Chang; Lam, Kin; Chung, Hee Jung; Tajkhorshid, Emad | Communications biology | 2021 10 14 | 34650221 | |
| Short-term and Long-term Rates of Postacute Sequelae of SARS-CoV-2 Infection: A Systematic Review. | Groff, Destin; Sun, Ashley; Ssentongo, Anna E; Ba, Djibril M; Parsons, Nicholas; Poudel, Govinda R; Lekoubou, Alain; Oh, John S; Ericson, Jessica E; Ssentongo, Paddy; Chinchilli, Vernon M | JAMA network open | 2021 10 01 | 34643720 | |
| MARCO+ lymphatic endothelial cells sequester arthritogenic alphaviruses to limit viremia and viral dissemination. | Carpentier, Kathryn S; Sheridan, Ryan M; Lucas, Cormac J; Davenport, Bennett J; Li, Frances S; Lucas, Erin D; McCarthy, Mary K; Reynoso, Glennys V; May, Nicholas A; Tamburini, Beth A J; Hesselberth, Jay R; Hickman, Heather D; Morrison, Thomas E | The EMBO journal | 2021 Oct 07 | 34618370 | |
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| Ectopic cervical thymi and no thymic involution until midlife in naked mole rats. | Emmrich, Stephan; Tolibzoda Zakusilo, Frances; Trapp, Alexandre; Zhou, Xuming; Zhang, Quanwei; Irving, Ellen M; Drage, Michael G; Zhang, Zhengdong; Gladyshev, Vadim N; Seluanov, Andrei; Gorbunova, Vera | Aging cell | 2021 10 | 34596321 | |
| Targeting the coronavirus nucleocapsid protein through GSK-3 inhibition. | Liu, Xiaolei; Verma, Anurag; Garcia Jr, Gustavo; Ramage, Holly; Lucas, Anastasia; Myers, Rebecca L; Michaelson, Jacob J; Coryell, William; Kumar, Arvind; Charney, Alexander W; Kazanietz, Marcelo G; Rader, Daniel J; Ritchie, Marylyn D; Berrettini, Wade H; | Proceedings of the National Academy of Sciences of the United States of America | 2021 10 19 | 34593624 | |
| Recording Temporal Signals with Minutes Resolution Using Enzymatic DNA Synthesis. | Bhan, Namita; Callisto, Alec; Strutz, Jonathan; Glaser, Joshua; Kalhor, Reza; Boyden, Edward S; Church, George; Kording, Konrad; Tyo, Keith E J | Journal of the American Chemical Society | 2021 10 13 | 34591459 | |
| SARS-CoV-2 and its beta variant of concern infect human conjunctival epithelial cells and induce differential antiviral innate immune response. | Singh, Sneha; Garcia Jr, Gustavo; Shah, Ruchi; Kramerov, Andrei A; Wright 3rd, Robert Emery; Spektor, Tanya M; Ljubimov, Alexander V; Arumugaswami, Vaithilingaraja; Kumar, Ashok | The ocular surface | 2022 01 | 34583089 | |
| Myeloperoxidase Inhibition Ameliorates Plaque Psoriasis in Mice. | Neu, Savannah D; Strzepa, Anna; Martin, Dustin; Sorci-Thomas, Mary G; Pritchard Jr, Kirkwood A; Dittel, Bonnie N | Antioxidants (Basel, Switzerland) | 2021 Aug 25 | 34572970 | |
| Genomic Stability and Genetic Defense Systems in Dolosigranulum pigrum, a Candidate Beneficial Bacterium from the Human Microbiome. | Flores Ramos, Stephany; Brugger, Silvio D; Escapa, Isabel Fernandez; Skeete, Chelsey A; Cotton, Sean L; Eslami, Sara M; Gao, Wei; Bomar, Lindsey; Tran, Tommy H; Jones, Dakota S; Minot, Samuel; Roberts, Richard J; Johnston, Christopher D; Lemon, Katherine P | mSystems | 2021 Sep 21 | 34546072 | |
| A prion accelerates proliferation at the expense of lifespan. | Garcia, David M; Campbell, Edgar A; Jakobson, Christopher M; Tsuchiya, Mitsuhiro; Shaw, Ethan A; DiNardo, Acadia L; Kaeberlein, Matt; Jarosz, Daniel F | eLife | 2021 09 15 | 34545808 | |
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| Applying deductive reasoning and the principles of particle physics to aging research. | Moldakozhayev, Alibek; Tskhay, Albina; Gladyshev, Vadim N | Aging | 2021 09 20 | 34543232 | |
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| In vitro and in cellula site-directed RNA editing using the λNDD-BoxB system. | Ojha, Namrata; Diaz Quiroz, Juan Felipe; Rosenthal, Joshua J C | Methods in enzymology | 2021 | 34517953 | |
| Stem/Proliferative and Differentiated Cells within Primary Murine Colonic Epithelium Display Distinct Intracellular Free Ca2+ Signal Codes. | Mestril, Sebastian; Kim, Raehyun; Hinman, Samuel S; Gomez, Shawn M; Allbritton, Nancy L | Advanced healthcare materials | 2021 Sep 12 | 34510822 | |
| Vaginal microbiome topic modeling of laboring Ugandan women with and without fever. | Movassagh, Mercedeh; Bebell, Lisa M; Burgoine, Kathy; Hehnly, Christine; Zhang, Lijun; Moran, Kim; Sheldon, Kathryn; Sinnar, Shamim A; Mbabazi-Kabachelor, Edith; Kumbakumba, Elias; Bazira, Joel; Ochora, Moses; Mulondo, Ronnie; Nsubuga, Brian Kaaya; Weeks, Andrew D; Gladstone, Melissa; Olupot-Olupot, Peter; Ngonzi, Joseph; Roberts, Drucilla J; Meier, Frederick A; Irizarry, Rafael A; Broach, James R; Schiff, Steven J; Paulson, Joseph N | NPJ biofilms and microbiomes | 2021 09 10 | 34508087 | |
| Pim kinase inhibitor co-treatment decreases alternative non-homologous end-joining DNA repair and genomic instability induced by topoisomerase 2 inhibitors in cells with FLT3 internal tandem duplication. | Scarpa, Mario; Kapoor, Shivani; Tvedte, Eric S; Doshi, Kshama A; Zou, Ying S; Singh, Prerna; Lee, Jonelle K; Chatterjee, Aditi; Ali, Moaath K Mustafa; Bromley, Robin E; Hotopp, Julie C Dunning; Rassool, Feyruz V; Baer, Maria R | Oncotarget | 2021 Aug 31 | 34504649 | |
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| Hairless regulates heterochromatin maintenance and muscle stem cell function as a histone demethylase antagonist. | Liu, Ling; Rodriguez-Mateo, Cristina; Huang, Polly; Huang, Albin; Lieu, Alexander; Mao, Michelle; Chung, Mingyu; Yang, Sharon; Yu, Kevin; Charville, Gregory W; Gan, Qiang; Rando, Thomas A | Proceedings of the National Academy of Sciences of the United States of America | 2021 Sep 14 | 34493660 | |
| High resolution stereolithography fabrication of perfusable scaffolds to enable long-term meso-scale hepatic culture for disease modeling. | Sphabmixay, Pierre; Raredon, Micha Sam Brickman; Wang, Alex J-S; Lee, Howon; Hammond, Paula T; Fang, Nicholas X; Griffith, Linda G | Biofabrication | 2021 09 21 | 34479229 | |
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| Loss of synergistic transcriptional feedback loops drives diverse B-cell cancers. | Andrews, Jared M; Pyfrom, Sarah C; Schmidt, Jennifer A; Koues, Olivia I; Kowalewski, Rodney A; Grams, Nicholas R; Sun, Jessica J; Berman, Leigh R; Duncavage, Eric J; Lee, Yi-Shan; Cashen, Amanda F; Oltz, Eugene M; Payton, Jacqueline E | EBioMedicine | 2021 Sep | 34461601 | |
| Structures and topological defects in pressure-driven lyotropic chromonic liquid crystals. | Zhang, Qing; Zhang, Rui; Ge, Baoliang; Yaqoob, Zahid; So, Peter T C; Bischofberger, Irmgard | Proceedings of the National Academy of Sciences of the United States of America | 2021 08 31 | 34446562 | |
| Poloxamer 188 Exerts Direct Protective Effects on Mouse Brain Microvascular Endothelial Cells in an In Vitro Traumatic Brain Injury Model. | Lotze, Felicia P; Riess, Matthias L | Biomedicines | 2021 Aug 19 | 34440247 | |
| Congenital Cytomegalovirus Infection Burden and Epidemiologic Risk Factors in Countries With Universal Screening: A Systematic Review and Meta-analysis. | Ssentongo, Paddy; Hehnly, Christine; Birungi, Patricia; Roach, Mikayla A; Spady, Jada; Fronterre, Claudio; Wang, Ming; Murray-Kolb, Laura E; Al-Shaar, Laila; Chinchilli, Vernon M; Broach, James R; Ericson, Jessica E; Schiff, Steven J | JAMA network open | 2021 08 02 | 34424308 | |
| Magnetically-propelled fecal surrogates for modeling the impact of solid-induced shear forces on primary colonic epithelial cells. | Hinman, Samuel S; Huling, Jennifer; Wang, Yuli; Wang, Hao; Bretherton, Ross C; DeForest, Cole A; Allbritton, Nancy L | Biomaterials | 2021 09 | 34412014 | |
| COVID-19 mortality rate in children is U-shaped. | Khera, Nina; Santesmasses, Didac; Kerepesi, Csaba; Gladyshev, Vadim N | Aging | 2021 08 18 | 34411000 | |
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| Spatiotemporally-resolved mapping of RNA binding proteins via functional proximity labeling reveals a mitochondrial mRNA anchor promoting stress recovery. | Qin, Wei; Myers, Samuel A; Carey, Dominique K; Carr, Steven A; Ting, Alice Y | Nature communications | 2021 08 17 | 34404792 | |
| Molecular mechanism of prestin electromotive signal amplification. | Ge, Jingpeng; Elferich, Johannes; Dehghani-Ghahnaviyeh, Sepehr; Zhao, Zhiyu; Meadows, Marc; von Gersdorff, Henrique; Tajkhorshid, Emad; Gouaux, Eric | Cell | 2021 Sep 02 | 34390643 | |
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| Genomic Mosaicism Formed by Somatic Variation in the Aging and Diseased Brain. | Costantino, Isabel; Nicodemus, Juliet; Chun, Jerold | Genes | 2021 Jul 14 | 34356087 | |
| Total-Body PET Kinetic Modeling and Potential Opportunities Using Deep Learning. | Wang, Yiran; Li, Elizabeth; Cherry, Simon R; Wang, Guobao | PET clinics | 2021 Oct | 34353745 | |
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| Barriers to the Use of Clinical Decision Support for the Evaluation of Pulmonary Embolism: Qualitative Interview Study. | Richardson, Safiya; Dauber-Decker, Katherine L; McGinn, Thomas; Barnaby, Douglas P; Cattamanchi, Adithya; Pekmezaris, Renee | JMIR human factors | 2021 Aug 04 | 34346901 | |
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| Intercellular Arc Signaling Regulates Vasodilation. | de la Peña, June Bryan; Barragan-Iglesias, Paulino; Lou, Tzu-Fang; Kunder, Nikesh; Loerch, Sarah; Shukla, Tarjani; Basavarajappa, Lokesh; Song, Jane; James, Dominique N; Megat, Salim; Moy, Jamie K; Wanghzou, Andi; Ray, Pradipta R; Hoyt, Kenneth; Steward, Oswald; Price, Theodore J; Shepherd, Jason; Campbell, Zachary T | The Journal of neuroscience : the official journal of the Society for Neuroscience | 2021 Sep 15 | 34326146 | |
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| Assessing the replicability of spatial gene expression using atlas data from the adult mouse brain. | Lu, Shaina; Ortiz, Cantin; Fürth, Daniel; Fischer, Stephan; Meletis, Konstantinos; Zador, Anthony; Gillis, Jesse | PLoS biology | 2021 Jul | 34280183 | |
| Fluoroethylnormemantine, a Novel NMDA Receptor Antagonist, for the Prevention and Treatment of Stress-Induced Maladaptive Behavior. | Chen, Briana K; Luna, Victor M; Shannon, Margaret E; Hunsberger, Holly C; Mastrodonato, Alessia; Stackmann, Michelle; McGowan, Josephine C; Rubinstenn, Gilles; Denny, Christine A | Biological psychiatry | 2021 10 01 | 34274107 | |
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| Relationship among egg quality traits in Japanese quails and prediction of egg weight and color using data mining algorithms. | Çelik, Şenol; Eyduran, Ecevit; Şengül, A Yusuf; Şengül, Turgay | Tropical animal health and production | 2021 Jul 01 | 34195902 | |
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| Pan-African evolution of within- and between-country COVID-19 dynamics. | Ssentongo, Paddy; Fronterre, Claudio; Geronimo, Andrew; Greybush, Steven J; Mbabazi, Pamela K; Muvawala, Joseph; Nahalamba, Sarah B; Omadi, Philip O; Opar, Bernard T; Sinnar, Shamim A; Wang, Yan; Whalen, Andrew J; Held, Leonhard; Jewell, Christopher; Muwanguzi, Abraham J B; Greatrex, Helen; Norton, Michael M; Diggle, Peter J; Schiff, Steven J | Proceedings of the National Academy of Sciences of the United States of America | 2021 07 13 | 34187879 | |
| In-Hospital 30-Day Survival Among Young Adults With Coronavirus Disease 2019: A Cohort Study. | Richardson, Safiya; Gitlin, Jordan; Kozel, Zachary; Levy, Sera; Rahman, Husneara; Hirsch, Jamie S; McGinn, Thomas; Diefenbach, Michael A | Open forum infectious diseases | 2021 Jun | 34183983 | |
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| Snapshot Photoacoustic Topography Through an Ergodic Relay for High-throughput Imaging of Optical Absorption. | Li, Yang; Li, Lei; Zhu, Liren; Maslov, Konstantin; Shi, Junhui; Hu, Peng; Bo, En; Yao, Junjie; Liang, Jinyang; Wang, Lidai; Wang, Lihong V | Nature photonics | 2020 Mar | 34178097 | |
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| Conserved Gammaherpesvirus Protein Kinase Counters the Antiviral Effects of Myeloid Cell-Specific STAT1 Expression To Promote the Establishment of Splenic B Cell Latency. | Sylvester, P A; Jondle, C N; Stoltz, K P; Lanham, J; Dittel, B N; Tarakanova, V L | Journal of virology | 2021 08 10 | 34132573 | |
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| The emerging landscape of single-molecule protein sequencing technologies. | Alfaro, Javier Antonio; Bohländer, Peggy; Dai, Mingjie; Filius, Mike; Howard, Cecil J; van Kooten, Xander F; Ohayon, Shilo; Pomorski, Adam; Schmid, Sonja; Aksimentiev, Aleksei; Anslyn, Eric V; Bedran, Georges; Cao, Chan; Chinappi, Mauro; Coyaud, Etienne; Dekker, Cees; Dittmar, Gunnar; Drachman, Nicholas; Eelkema, Rienk; Goodlett, David; Hentz, Sébastien; Kalathiya, Umesh; Kelleher, Neil L; Kelly, Ryan T; Kelman, Zvi; Kim, Sung Hyun; Kuster, Bernhard; Rodriguez-Larrea, David; Lindsay, Stuart; Maglia, Giovanni; Marcotte, Edward M; Marino, John P; Masselon, Christophe; Mayer, Michael; Samaras, Patroklos; Sarthak, Kumar; Sepiashvili, Lusia; Stein, Derek; Wanunu, Meni; Wilhelm, Mathias; Yin, Peng; Meller, Amit; Joo, Chirlmin | Nature methods | 2021 Jun | 34099939 | |
| A microRNA expression and regulatory element activity atlas of the mouse immune system. | Rose, Samuel A; Wroblewska, Aleksandra; Dhainaut, Maxime; Yoshida, Hideyuki; Shaffer, Jonathan M; Bektesevic, Anela; Ben-Zvi, Benjamin; Rhoads, Andrew; Kim, Edy Y; Yu, Bingfei; Lavin, Yonit; Merad, Miriam; Buenrostro, Jason D; Brown, Brian D; Immunological Genome Consortium | Nature immunology | 2021 07 | 34099919 | |
| Replicate sequencing libraries are important for quantification of allelic imbalance. | Mendelevich, Asia; Vinogradova, Svetlana; Gupta, Saumya; Mironov, Andrey A; Sunyaev, Shamil R; Gimelbrant, Alexander A | Nature communications | 2021 06 07 | 34099647 | |
| The cell biology of synapse formation. | Südhof, Thomas C | The Journal of cell biology | 2021 07 05 | 34086051 | |
| Gold nanoparticles and tilt pairs to assess protein flexibility by cryo-electron microscopy. | Jagota, Milind; Townshend, Raphael J L; Kang, Lin-Woo; Bushnell, David A; Dror, Ron O; Kornberg, Roger D; Azubel, Maia | Ultramicroscopy | 2021 Aug | 34062386 | |
| Racial and ethnic minority patient participation in N-of-1 trials: perspectives of healthcare providers and patients. | Marrast, Lyndonna; Conigliaro, Joseph; Chan, Camille; Kim, Eun Ji; Duer-Hefele, Joan; Diefenbach, Michael A; Davidson, Karina W | Personalized medicine | 2021 Jul | 34047197 | |
| 3D genomics across the tree of life reveals condensin II as a determinant of architecture type. | Hoencamp, Claire; Dudchenko, Olga; Elbatsh, Ahmed M O; Brahmachari, Sumitabha; Raaijmakers, Jonne A; van Schaik, Tom; Sedeño Cacciatore, Ángela; Contessoto, Vinícius G; van Heesbeen, Roy G H P; van den Broek, Bram; Mhaskar, Aditya N; Teunissen, Hans; St H | Science (New York, N.Y.) | 2021 05 28 | 34045355 | |
| Characterization of the public transit air microbiome and resistome reveals geographical specificity. | Leung, M H Y; Tong, X; Bøifot, K O; Bezdan, D; Butler, D J; Danko, D C; Gohli, J; Green, D C; Hernandez, M T; Kelly, F J; Levy, S; Mason-Buck, G; Nieto-Caballero, M; Syndercombe-Court, D; Udekwu, K; Young, B G; Mason, C E; Dybwad, M; Lee, P K H | Microbiome | 2021 05 26 | 34039416 | |
| Tutorial: practical considerations for tissue clearing and imaging. | Weiss, Kurt R; Voigt, Fabian F; Shepherd, Douglas P; Huisken, Jan | Nature protocols | 2021 06 | 34021294 | |
| Development of a blocker of the universal phosphatidylserine- and phosphatidylethanolamine-dependent viral entry pathways. | Song, Da-Hoon; Garcia Jr, Gustavo; Situ, Kathy; Chua, Bernadette A; Hong, Madeline Lauren O; Do, Elyza A; Ramirez, Christina M; Harui, Airi; Arumugaswami, Vaithilingaraja; Morizono, Kouki | Virology | 2021 08 | 34020328 | |
| Increased tissue stiffness triggers contractile dysfunction and telomere shortening in dystrophic cardiomyocytes. | Chang, Alex C Y; Pardon, Gaspard; Chang, Andrew C H; Wu, Haodi; Ong, Sang-Ging; Eguchi, Asuka; Ancel, Sara; Holbrook, Colin; Ramunas, John; Ribeiro, Alexandre J S; LaGory, Edward L; Wang, Honghui; Koleckar, Kassie; Giaccia, Amato; Mack, David L; Childers, Martin K; Denning, Chris; Day, John W; Wu, Joseph C; Pruitt, Beth L; Blau, Helen M | Stem cell reports | 2021 Sep 14 | 34019816 | |
| Hyperglycemia minimally alters primary self-renewing human colonic epithelial cells while TNFα-promotes severe intestinal epithelial dysfunction. | Dutton, Johanna S; Hinman, Samuel S; Kim, Raehyun; Attayek, Peter J; Maurer, Mallory; Sims, Christopher S; Allbritton, Nancy L | Integrative biology : quantitative biosciences from nano to macro | 2021 Jun 15 | 33989405 | |
| Integrating barcoded neuroanatomy with spatial transcriptional profiling enables identification of gene correlates of projections. | Sun, Yu-Chi; Chen, Xiaoyin; Fischer, Stephan; Lu, Shaina; Zhan, Huiqing; Gillis, Jesse; Zador, Anthony M | Nature neuroscience | 2021 Jun | 33972801 | |
| Machine learning of EEG spectra classifies unconsciousness during GABAergic anesthesia. | Abel, John H; Badgeley, Marcus A; Meschede-Krasa, Benyamin; Schamberg, Gabriel; Garwood, Indie C; Lecamwasam, Kimaya; Chakravarty, Sourish; Zhou, David W; Keating, Matthew; Purdon, Patrick L; Brown, Emery N | PloS one | 2021 | 33956800 | |
| Targeting microRNA-mediated gene repression limits adipogenic conversion of skeletal muscle mesenchymal stromal cells. | Wosczyna, Michael N; Perez Carbajal, Edgar E; Wagner, Mark W; Paredes, Silvana; Konishi, Colin T; Liu, Ling; Wang, Theodore T; Walsh, Rachel A; Gan, Qiang; Morrissey, Christapher S; Rando, Thomas A | Cell stem cell | 2021 Jul 01 | 33945794 | |
| SynNotch-CAR T cells overcome challenges of specificity, heterogeneity, and persistence in treating glioblastoma. | Choe, Joseph H; Watchmaker, Payal B; Simic, Milos S; Gilbert, Ryan D; Li, Aileen W; Krasnow, Nira A; Downey, Kira M; Yu, Wei; Carrera, Diego A; Celli, Anna; Cho, Juhyun; Briones, Jessica D; Duecker, Jason M; Goretsky, Yitzhar E; Dannenfelser, Ruth; Cardarelli, Lia; Troyanskaya, Olga; Sidhu, Sachdev S; Roybal, Kole T; Okada, Hideho; Lim, Wendell A | Science translational medicine | 2021 04 28 | 33910979 | |
| Simple biochemical features underlie transcriptional activation domain diversity and dynamic, fuzzy binding to Mediator. | Sanborn, Adrian L; Yeh, Benjamin T; Feigerle, Jordan T; Hao, Cynthia V; Townshend, Raphael Jl; Lieberman Aiden, Erez; Dror, Ron O; Kornberg, Roger D | eLife | 2021 Apr 27 | 33904398 | |
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| Protein design and variant prediction using autoregressive generative models. | Shin, Jung-Eun; Riesselman, Adam J; Kollasch, Aaron W; McMahon, Conor; Simon, Elana; Sander, Chris; Manglik, Aashish; Kruse, Andrew C; Marks, Debora S | Nature communications | 2021 04 23 | 33893299 | |
| Proteomics of protein trafficking by in vivo tissue-specific labeling. | Droujinine, Ilia A; Meyer, Amanda S; Wang, Dan; Udeshi, Namrata D; Hu, Yanhui; Rocco, David; McMahon, Jill A; Yang, Rui; Guo, JinJin; Mu, Luye; Carey, Dominique K; Svinkina, Tanya; Zeng, Rebecca; Branon, Tess; Tabatabai, Areya; Bosch, Justin A; Asara, John M; Ting, Alice Y; Carr, Steven A; McMahon, Andrew P; Perrimon, Norbert | Nature communications | 2021 04 22 | 33888706 | |
| Sex-Based Differences in COVID-19 Outcomes. | Tejpal, Astha; Gianos, Eugenia; Cerise, Jane; Hirsch, Jamie S; Rosen, Stacey; Kohn, Nina; Lesser, Martin; Weinberg, Catherine; Majure, David; Satapathy, Sanjaya K; Bernstein, David; Barish, Matthew A; Spyropoulos, Alex C; Brown, Rachel-Maria | Journal of women's health (2002) | 2021 04 | 33885345 | |
| To eat, or not to eat, that is the question: Neural stem cells escape phagocytosis in autism with macrocephaly. | Schafer, Simon T; Gage, Fred H | Proceedings of the National Academy of Sciences of the United States of America | 2021 May 11 | 33883269 | |
| The Cortical Motor Areas and the Emergence of Motor Skills: A Neuroanatomical Perspective. | Strick, Peter L; Dum, Richard P; Rathelot, Jean-Alban | Annual review of neuroscience | 2021 Apr 16 | 33863253 | |
| Photoacoustic Computed Tomography of Breast Cancer in Response to Neoadjuvant Chemotherapy. | Lin, Li; Tong, Xin; Hu, Peng; Invernizzi, Marta; Lai, Lily; Wang, Lihong V | Advanced science (Weinheim, Baden-Wurttemberg, Germany) | 2021 04 | 33854889 | |
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| Vibration-Energy-Harvesting System: Transduction Mechanisms, Frequency Tuning Techniques, and Biomechanical Applications. | Dong, Lin; Closson, Andrew B; Jin, Congran; Trase, Ian; Chen, Zi; Zhang, John X J | Advanced materials technologies | 2019 Oct | 33829079 | |
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| Risk factors and outcomes for acute-on-chronic liver failure in COVID-19: a large multi-center observational cohort study. | Satapathy, Sanjaya K; Roth, Nitzan C; Kvasnovsky, Charlotte; Hirsch, Jamie S; Trindade, Arvind J; Molmenti, Ernesto; Barish, Matthew; Hirschwerk, David; Da, Ben L; Bernstein, David; Northwell Health COVID-19 Research Consortium | Hepatology international | 2021 Apr 07 | 33826042 | |
| Effectiveness of SARS-CoV-2 Decontamination and Containment in a COVID-19 ICU. | Brune, Zarina; Kuschner, Cyrus E; Mootz, Joseph; Davidson, Karina W; Pena, Robert C F; Ghanem, Mustafa H; Fischer, Austin; Gitman, Michael; Teperman, Lewis; Mason, Christopher; Becker, Lance B | International journal of environmental research and public health | 2021 03 03 | 33802332 | |
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| A highly homogeneous polymer composed of tetrahedron-like monomers for high-isotropy expansion microscopy. | Gao, Ruixuan; Yu, Chih-Chieh Jay; Gao, Linyi; Piatkevich, Kiryl D; Neve, Rachael L; Munro, James B; Upadhyayula, Srigokul; Boyden, Edward S | Nature nanotechnology | 2021 Jun | 33782587 | |
| Comparison of long read sequencing technologies in interrogating bacteria and fly genomes. | Tvedte, Eric S; Gasser, Mark; Sparklin, Benjamin C; Michalski, Jane; Hjelmen, Carl E; Johnston, J Spencer; Zhao, Xuechu; Bromley, Robin; Tallon, Luke J; Sadzewicz, Lisa; Rasko, David A; Hotopp, Julie C Dunning | G3 (Bethesda, Md.) | 2021 Mar 26 | 33768248 | |
| Propranolol Decreases Fear Expression by Modulating Fear Memory Traces. | Leal Santos, Sofia; Stackmann, Michelle; Muñoz Zamora, Andrea; Mastrodonato, Alessia; De Landri, Allegra V; Vaughan, Nick; Chen, Briana K; Lanio, Marcos; Denny, Christine A | Biological psychiatry | 2021 06 15 | 33766406 | |
| PET Parametric Imaging: Past, Present, and Future. | Wang, Guobao; Rahmim, Arman; Gunn, Roger N | IEEE transactions on radiation and plasma medical sciences | 2020 Nov | 33763624 | |
| Prevalence and determinants of cervical cancer screening in five sub-Saharan African countries: A population-based study. | Ba, Djibril M; Ssentongo, Paddy; Musa, Jonah; Agbese, Edeanya; Diakite, Brehima; Traore, Cheick Bougadari; Wang, Steve; Maiga, Mamoudou | Cancer epidemiology | 2021 06 | 33756434 | |
| The relationship between gastrointestinal cancers and the microbiota. | LaCourse, Kaitlyn D; Johnston, Christopher D; Bullman, Susan | The lancet. Gastroenterology & hepatology | 2021 06 | 33743198 | |
| Plasmodium falciparum LipB mutants display altered redox and carbon metabolism in asexual stages and cannot complete sporogony in Anopheles mosquitoes. | Biddau, Marco; Santha Kumar, T R; Henrich, Philipp; Laine, Larissa M; Blackburn, Gavin J; Chokkathukalam, Achuthanunni; Li, Tao; Lee Sim, Kim; King, Lewis; Hoffman, Stephen L; Barrett, Michael P; Coombs, Graham H; McFadden, Geoffrey I; Fidock, David A; Müller, Sylke; Sheiner, Lilach | International journal for parasitology | 2021 May | 33713652 | |
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| Lineage barcoding in mice with homing CRISPR. | Leeper, Kathleen; Kalhor, Kian; Vernet, Andyna; Graveline, Amanda; Church, George M; Mali, Prashant; Kalhor, Reza | Nature protocols | 2021 Mar 10 | 33692551 | |
| Genome-wide investigation identifies a rare copy-number variant burden associated with human spina bifida. | Wolujewicz, Paul; Aguiar-Pulido, Vanessa; AbdelAleem, Alice; Nair, Vidya; Thareja, Gaurav; Suhre, Karsten; Shaw, Gary M; Finnell, Richard H; Elemento, Olivier; Ross, M Elizabeth | Genetics in medicine : official journal of the American College of Medical Genetics | 2021 Jul | 33686259 | |
| Giotto: a toolbox for integrative analysis and visualization of spatial expression data. | Dries, Ruben; Zhu, Qian; Dong, Rui; Eng, Chee-Huat Linus; Li, Huipeng; Liu, Kan; Fu, Yuntian; Zhao, Tianxiao; Sarkar, Arpan; Bao, Feng; George, Rani E; Pierson, Nico; Cai, Long; Yuan, Guo-Cheng | Genome biology | 2021 Mar 08 | 33685491 | |
| BARcode DEmixing through Non-negative Spatial Regression (BarDensr). | Chen, Shuonan; Loper, Jackson; Chen, Xiaoyin; Vaughan, Alex; Zador, Anthony M; Paninski, Liam | PLoS computational biology | 2021 03 | 33684106 | |
| Binding mode of SARS-CoV-2 fusion peptide to human cellular membrane. | Gorgun, Defne; Lihan, Muyun; Kapoor, Karan; Tajkhorshid, Emad | Biophysical journal | 2021 07 20 | 33675757 | |
| Selective axonal translation of the mRNA isoform encoding prenylated Cdc42 supports axon growth. | Lee, Seung Joon; Zdradzinski, Matthew D; Sahoo, Pabitra K; Kar, Amar N; Patel, Priyanka; Kawaguchi, Riki; Aguilar, Byron J; Lantz, Kelsey D; McCain, Caylee R; Coppola, Giovanni; Lu, Qun; Twiss, Jeffery L | Journal of cell science | 2021 04 01 | 33674450 | |
| Altered Neuronal Support and Inflammatory Response in Bipolar Disorder Patient-Derived Astrocytes. | Vadodaria, Krishna C; Mendes, Ana P D; Mei, Arianna; Racha, Vipula; Erikson, Galina; Shokhirev, Maxim N; Oefner, Ruth; Heard, Kelly J; McCarthy, Michael J; Eyler, Lisa; Kelsoe, John R; Santos, Renata; Marchetto, Maria C; Gage, Fred H | Stem cell reports | 2021 04 13 | 33667413 | |
| Pluripotent stem cell-derived models of neurological diseases reveal early transcriptional heterogeneity. | Sorek, Matan; Oweis, Walaa; Nissim-Rafinia, Malka; Maman, Moria; Simon, Shahar; Hession, Cynthia C; Adiconis, Xian; Simmons, Sean K; Sanjana, Neville E; Shi, Xi; Lu, Congyi; Pan, Jen Q; Xu, Xiaohong; Pouladi, Mahmoud A; Ellerby, Lisa M; Zhang, Feng; Levin, Joshua Z; Meshorer, Eran | Genome biology | 2021 03 04 | 33663567 | |
| Visualizing the dynamics of tuberculosis pathology using molecular imaging. | Ordonez, Alvaro A; Tucker, Elizabeth W; Anderson, Carolyn J; Carter, Claire L; Ganatra, Shashank; Kaushal, Deepak; Kramnik, Igor; Lin, Philana L; Madigan, Cressida A; Mendez, Susana; Rao, Jianghong; Savic, Rada M; Tobin, David M; Walzl, Gerhard; Wilkinson, Robert J; Lacourciere, Karen A; Via, Laura E; Jain, Sanjay K | The Journal of clinical investigation | 2021 Mar 01 | 33645551 | |
| T cell circuits that sense antigen density with an ultrasensitive threshold. | Hernandez-Lopez, Rogelio A; Yu, Wei; Cabral, Katelyn A; Creasey, Olivia A; Lopez Pazmino, Maria Del Pilar; Tonai, Yurie; De Guzman, Arsenia; Mäkelä, Anna; Saksela, Kalle; Gartner, Zev J; Lim, Wendell A | Science (New York, N.Y.) | 2021 03 12 | 33632893 | |
| Fluoroethylnormemantine, A Novel Derivative of Memantine, Facilitates Extinction Learning Without Sensorimotor Deficits. | Chen, Briana K; Le Pen, Gwenaëlle; Eckmier, Adam; Rubinstenn, Gilles; Jay, Therese M; Denny, Christine A | The international journal of neuropsychopharmacology | 2021 07 14 | 33631001 | |
| T cells selectively filter oscillatory signals on the minutes timescale. | O'Donoghue, Geoff P; Bugaj, Lukasz J; Anderson, Warren; Daniels, Kyle G; Rawlings, David J; Lim, Wendell A | Proceedings of the National Academy of Sciences of the United States of America | 2021 Mar 02 | 33627405 | |
| Variability within rare cell states enables multiple paths toward drug resistance. | Emert, Benjamin L; Cote, Christopher J; Torre, Eduardo A; Dardani, Ian P; Jiang, Connie L; Jain, Naveen; Shaffer, Sydney M; Raj, Arjun | Nature biotechnology | 2021 Feb 22 | 33619394 | |
| Experimental Designs to Optimize Treatments for Individuals: Personalized N-of-1 Trials. | Davidson, Karina W; Silverstein, Michael; Cheung, Ken; Paluch, Rocco A; Epstein, Leonard H | JAMA pediatrics | 2021 Apr 01 | 33587109 | |
| Exploiting Allosteric Properties of RAF and MEK Inhibitors to Target Therapy-Resistant Tumors Driven by Oncogenic BRAF Signaling. | Adamopoulos, Christos; Ahmed, Tamer A; Tucker, Maxwell R; Ung, Peter M U; Xiao, Min; Karoulia, Zoi; Amabile, Angelo; Wu, Xuewei; Aaronson, Stuart A; Ang, Celina; Rebecca, Vito W; Brown, Brian D; Schlessinger, Avner; Herlyn, Meenhard; Wang, Qi; Shaw, David E; Poulikakos, Poulikos I | Cancer discovery | 2021 Jul | 33568355 | |
| Mechanism of gating and partial agonist action in the glycine receptor. | Yu, Jie; Zhu, Hongtao; Lape, Remigijus; Greiner, Timo; Du, Juan; Lü, Wei; Sivilotti, Lucia; Gouaux, Eric | Cell | 2021 Feb 18 | 33567265 | |
| High-speed three-dimensional photoacoustic computed tomography for preclinical research and clinical translation. | Lin, Li; Hu, Peng; Tong, Xin; Na, Shuai; Cao, Rui; Yuan, Xiaoyun; Garrett, David C; Shi, Junhui; Maslov, Konstantin; Wang, Lihong V | Nature communications | 2021 02 09 | 33563996 | |
| Severity of liver test abnormalities in coronavirus disease 2019 depends on comorbidities and predicts early in-hospital mortality. | Satapathy, Sanjaya K; Kuntzen, Christian; Qiu, He; Jiang, Yu; Bodenheimer, Henry C; Roth, Nitzan C; Lee, Tai-Ping; Hirsch, Jamie S; Trindade, Arvind J; Bernstein, David E; Northwell Health COVID-19 Research Consortium | European journal of gastroenterology & hepatology | 2021 Feb 05 | 33560687 | |
| Examination of patient characteristics and hydroxychloroquine use based on the US Food and Drug Administration's recommendation: a cross-sectional analysis in New York. | Kim, Eun Ji; Coppa, Kevin; Hirsch, Jamie S; Abrahams, Sara; Johnson, Jennifer; Lesser, Martin; Davidson, Karina W; Conigliaro, Joseph; Northwell Health COVID-19 Research Consortium; Northwell Health COVID-19 Research Consortium | BMJ open | 2021 02 08 | 33558355 | |
| The evolution of red color vision is linked to coordinated rhodopsin tuning in lycaenid butterflies. | Liénard, Marjorie A; Bernard, Gary D; Allen, Andrew; Lassance, Jean-Marc; Song, Siliang; Childers, Richard Rabideau; Yu, Nanfang; Ye, Dajia; Stephenson, Adriana; Valencia-Montoya, Wendy A; Salzman, Shayla; Whitaker, Melissa R L; Calonje, Michael; Zhang, Feng; Pierce, Naomi E | Proceedings of the National Academy of Sciences of the United States of America | 2021 Feb 09 | 33547236 | |
| A diagnostic host response biosignature for COVID-19 from RNA profiling of nasal swabs and blood. | Ng, Dianna L; Granados, Andrea C; Santos, Yale A; Servellita, Venice; Goldgof, Gregory M; Meydan, Cem; Sotomayor-Gonzalez, Alicia; Levine, Andrew G; Balcerek, Joanna; Han, Lucy M; Akagi, Naomi; Truong, Kent; Neumann, Neil M; Nguyen, David N; Bapat, Sagar P; Cheng, Jing; Martin, Claudia Sanchez-San; Federman, Scot; Foox, Jonathan; Gopez, Allan; Li, Tony; Chan, Ray; Chu, Cynthia S; Wabl, Chiara A; Gliwa, Amelia S; Reyes, Kevin; Pan, Chao-Yang; Guevara, Hugo; Wadford, Debra; Miller, Steve; Mason, Christopher E; Chiu, Charles Y | Science advances | 2021 02 | 33536218 | |
| Pathogenic LMNA variants disrupt cardiac lamina-chromatin interactions and de-repress alternative fate genes. | Shah, Parisha P; Lv, Wenjian; Rhoades, Joshua H; Poleshko, Andrey; Abbey, Deepti; Caporizzo, Matthew A; Linares-Saldana, Ricardo; Heffler, Julie G; Sayed, Nazish; Thomas, Dilip; Wang, Qiaohong; Stanton, Liam J; Bedi, Kenneth; Morley, Michael P; Cappola, Thomas P; Owens, Anjali T; Margulies, Kenneth B; Frank, David B; Wu, Joseph C; Rader, Daniel J; Yang, Wenli; Prosser, Benjamin L; Musunuru, Kiran; Jain, Rajan | Cell stem cell | 2021 Jan 26 | 33529599 | |
| Skin-resident natural killer T cells participate in cutaneous allergic inflammation in atopic dermatitis. | Sun, ZhengWang; Kim, Ji Hye; Kim, Seo Hyeong; Kim, Hye Ran; Zhang, KeLun; Pan, Youdong; Ko, Min Kyung; Kim, Bo Mi; Chu, Howard; Lee, Hee Ra; Kim, Hye Li; Kim, Ji Hyung; Fu, Xiujun; Hyun, Young-Min; Yun, Ki Na; Kim, Jin Young; Lee, Dong Won; Song, Seung Yong; Lin, Charles P; Clark, Rachael A; Lee, Kwang Hoon; Kupper, Thomas S; Park, Chang Ook | The Journal of allergy and clinical immunology | 2021 Jan 28 | 33516870 | |
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| Intercellular Communication in the Nervous System Goes Viral. | Hantak, Michael P; Einstein, Jenifer; Kearns, Rachel B; Shepherd, Jason D | Trends in neurosciences | 2021 Apr | 33485691 | |
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| Narrower Nanoribbon Biosensors Fabricated by Chemical Lift-off Lithography Show Higher Sensitivity. | Zhao, Chuanzhen; Liu, Qingzhou; Cheung, Kevin M; Liu, Wenfei; Yang, Qing; Xu, Xiaobin; Man, Tianxing; Weiss, Paul S; Zhou, Chongwu; Andrews, Anne M | ACS nano | 2021 01 26 | 33337135 | |
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| BMI as a Risk Factor for Clinical Outcomes in Patients Hospitalized with COVID-19 in New York. | Kim, Tara S; Roslin, Mitchell; Wang, Jason J; Kane, Jamie; Hirsch, Jamie S; Kim, Eun Ji; Northwell Health COVID-19 Research Consortium | Obesity (Silver Spring, Md.) | 2021 02 | 33128848 | |
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| Electrochemical Reduction and Oxidation of Eight Unnatural 2'-Deoxynucleosides at a Pyrolytic Graphite Electrode. | ?pa?ek, Jan; Karalkar, Nilesh; Fojta, Miroslav; Wang, Joseph; Benner, Steven A | Electrochimica acta. | 2020 Dec 01; | 33087943 | |
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| Flexible Multiplexed In2O3 Nanoribbon Aptamer-Field-Effect Transistors for Biosensing. | Liu, Qingzhou; Zhao, Chuanzhen; Chen, Mingrui; Liu, Yihang; Zhao, Zhiyuan; Wu, Fanqi; Li, Zhen; Weiss, Paul S; Andrews, Anne M; Zhou, Chongwu | iScience. | 2020 Sep 25; | 33083757 | |
| The Problem of Microbial Dark Matter in Neonatal Sepsis. | Sinnar, Shamim A; Schiff, Steven J | Emerging infectious diseases | 2020 11 | 33080169 | |
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| Neuromodulator Signaling Bidirectionally Controls Vesicle Numbers in Human Synapses. | Patzke, Christopher; Brockmann, Marisa M; Dai, Jinye; Gan, Kathlyn J; Grauel, M Katharina; Fenske, Pascal; Liu, Yu; Acuna, Claudio; Rosenmund, Christian; Südhof, Thomas C | Cell. | 2019 Oct 03; | 31585084 | |
| Host Lymphotoxin-? Receptor Signaling Is Crucial for Angiogenesis of Metanephric Tissue Transplanted into Lymphoid Sites. | Francipane, Maria Giovanna; Han, Bing; Lagasse, Eric | The American journal of pathology. | 2020 Jan; | 31585070 | |
| Highly structured homolog pairing reflects functional organization of the Drosophila genome. | AlHaj Abed, Jumana; Erceg, Jelena; Goloborodko, Anton; Nguyen, Son C; McCole, Ruth B; Saylor, Wren; Fudenberg, Geoffrey; Lajoie, Bryan R; Dekker, Job; Mirny, Leonid A; Wu, C-Ting | Nature communications. | 2019 Oct 03; | 31582763 | |
| The genome-wide multi-layered architecture of chromosome pairing in early Drosophila embryos. | Erceg, Jelena; AlHaj Abed, Jumana; Goloborodko, Anton; Lajoie, Bryan R; Fudenberg, Geoffrey; Abdennur, Nezar; Imakaev, Maxim; McCole, Ruth B; Nguyen, Son C; Saylor, Wren; Joyce, Eric F; Senaratne, T Niroshini; Hannan, Mohammed A; Nir, Guy; Dekker, Job; Mirny, Leonid A; Wu, C-Ting | Nature communications. | 2019 Oct 03; | 31582744 | |
| Cognitive Impairment Is Associated with Absolute Intraoperative Frontal ?-Band Power but Not with Baseline ?-Band Power: A Pilot Study. | Koch, Susanne; Feinkohl, Insa; Chakravarty, Sourish; Windmann, Victoria; Lichtner, Gregor; Pischon, Tobias; Brown, Emery N; Spies, Claudia; BioCog Study Group | Dementia and geriatric cognitive disorders. | 2019; | 31578031 | |
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| PennPET Explorer: Human Imaging on a Whole-Body Imager. | Pantel, Austin R; Viswanath, Varsha; Daube-Witherspoon, Margaret E; Dubroff, Jacob G; Muehllehner, Gerd; Parma, Michael J; Pryma, Daniel A; Schubert, Erin K; Mankoff, David A; Karp, Joel S | Journal of nuclear medicine : official publication, Society of Nuclear Medicine. | 2020 01; | 31562224 | |
| An automated microfluidic device for time-lapse imaging of mouse embryonic stem cells. | Laing, Adam F; Tirumala, Venkat; Hegarty, Evan; Mondal, Sudip; Zhao, Peisen; Hamilton, William B; Brickman, Joshua M; Ben-Yakar, Adela | Biomicrofluidics. | 2019 Sep; | 31558920 | |
| Multifaceted Changes in Synaptic Composition and Astrocytic Involvement in a Mouse Model of Fragile X Syndrome. | Simhal, Anish K; Zuo, Yi; Perez, Marc M; Madison, Daniel V; Sapiro, Guillermo; Micheva, Kristina D | Scientific reports. | 2019 Sep 25; | 31554841 | |
| High Frequency Spectral Ultrasound Imaging to Detect Metastasis in Implanted Biomaterial Scaffolds. | Bushnell, Grace G; Hong, Xiaowei; Hartfield, Rachel M; Zhang, Yining; Oakes, Robert S; Rao, Shreyas S; Jeruss, Jacqueline S; Stegemann, Jan P; Deng, Cheri X; Shea, Lonnie D | Annals of biomedical engineering. | 2019 Sep 23; | 31549327 | |
| UV-responsive cyclic peptide progelator bioinks. | Carlini, Andrea S; Touve, Mollie A; Fernández-Caro, Héctor; Thompson, Matthew P; Cassidy, Mary F; Cao, Wei; Gianneschi, Nathan C | Faraday discussions. | 2019 10 30; | 31549115 | |
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| Microporous scaffolds loaded with immunomodulatory lentivirus to study the contribution of immune cell populations to tumor cell recruitment in vivo. | Bushnell, Grace G; Rao, Shreyas S; Hartfield, Rachel M; Zhang, Yining; Oakes, Robert S; Jeruss, Jacqueline S; Shea, Lonnie D | Biotechnology and bioengineering. | 2019 Sep 23; | 31544959 | |
| Proximity labeling of protein complexes and cell-type-specific organellar proteomes in Arabidopsis enabled by TurboID. | Mair, Andrea; Xu, Shou-Ling; Branon, Tess C; Ting, Alice Y; Bergmann, Dominique C | eLife | 2019 09 19 | 31535972 | |
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| Learning the pattern of epistasis linking genotype and phenotype in a protein. | Poelwijk, Frank J; Socolich, Michael; Ranganathan, Rama | Nature communications | 2019 Sep 16 | 4213 | 31527666 |
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| On Functions Computed on Trees. | Farhoodi, Roozbeh; Filom, Khashayar; Jones, Ilenna Simone; Kording, Konrad Paul | Neural computation. | 2019 11; | 31525312 | |
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| Activity-Dependent Regulation of the Proapoptotic BH3-Only Gene egl-1 in a Living Neuron Pair in Caenorhabditis elegans. | Cohn, Jesse; Dwivedi, Vivek; Valperga, Giulio; Zarate, Nicole; de Bono, Mario; Horvitz, H Robert; Pierce, Jonathan T | G3 (Bethesda, Md.). | 2019 Sep 13; | 31519744 | |
| An in vitro intestinal platform with a self-sustaining oxygen gradient to study the human gut/microbiome interface. | Kim, Raehyun; Attayek, Peter J; Wang, Yuli; Furtado, Kathleen L; Tamayo, Rita; Sims, Christopher E; Allbritton, Nancy L | Biofabrication. | 2019 11 06; | 31519008 | |
| A network of phosphatidylinositol 4,5-bisphosphate binding sites regulates gating of the Ca2+-activated Cl- channel ANO1 (TMEM16A). | Yu, Kuai; Jiang, Tao; Cui, YuanYuan; Tajkhorshid, Emad; Hartzell, H Criss | Proceedings of the National Academy of Sciences of the United States of America. | 2019 10 01; | 31515451 | |
| Spatial transcriptome profiling by MERFISH reveals subcellular RNA compartmentalization and cell cycle-dependent gene expression. | Xia, Chenglong; Fan, Jean; Emanuel, George; Hao, Junjie; Zhuang, Xiaowei | Proceedings of the National Academy of Sciences of the United States of America. | 2019 09 24; | 31501331 | |
| Molecular imaging of bacterial infections: Overcoming the barriers to clinical translation. | Ordonez, Alvaro A; Sellmyer, Mark A; Gowrishankar, Gayatri; Ruiz-Bedoya, Camilo A; Tucker, Elizabeth W; Palestro, Christopher J; Hammoud, Dima A; Jain, Sanjay K | Science translational medicine. | 2019 Sep 04; | 31484790 | |
| Disruption of the ascending arousal network in acute traumatic disorders of consciousness. | Snider, Samuel B; Bodien, Yelena G; Bianciardi, Marta; Brown, Emery N; Wu, Ona; Edlow, Brian L | Neurology. | 2019 09 24; | 31484715 | |
| A Pungent and Painful Toxin. | Green, Dustin; Dong, Xinzhong | Cell. | 2019 09 05; | 31474364 | |
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| TwinBLAST: When Two Is Better than One. | Dunning Hotopp, Julie C; Matsumura, James; Bromley, Robin E; Riley, David R; Agrawal, Sonia; Sparklin, Ben; Mattick, John; Crabtree, Jonathan; Mahurkar, Anup | Microbiology resource announcements. | 2019 Aug 29; | 31467106 | |
| Severe lung disease characterized by lymphocytic bronchiolitis, alveolar ductitis, and emphysema (BADE) in industrial machine-manufacturing workers. | Cummings, Kristin J; Stanton, Marcia L; Nett, Randall J; Segal, Leopoldo N; Kreiss, Kathleen; Abraham, Jerrold L; Colby, Thomas V; Franko, Angela D; Green, Francis H Y; Sanyal, Soma; Tallaksen, Robert J; Wendland, Douglas; Bachelder, Vance D; Boylstein, R | American journal of industrial medicine. | 2019 11; | 31461179 | |
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| High-resolution, high-contrast mid-infrared imaging of fresh biological samples with ultraviolet-localized photoacoustic microscopy. | Shi, Junhui; Wong, Terence T W; He, Yun; Li, Lei; Zhang, Ruiying; Yung, Christopher S; Hwang, Jeeseong; Maslov, Konstantin; Wang, Lihong V | Nature photonics. | 2019 Sep; | 31440304 | |
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| Barriers and innovative interventions for early detection of cervical cancer. | Baezconde-Garbanati, Lourdes; Agurto, Irene; Gravitt, Patti E; Luciani, Silvana; Murphy, Sheila; Ochoa, Carol; Gallegos, Katia; Barahona, Rosa; Rodríguez, Yaneth | Salud publica de Mexico. | 2019 Jul-Aug; | 31430087 | |
| Immuno-SABER enables highly multiplexed and amplified protein imaging in tissues. | Saka, Sinem K; Wang, Yu; Kishi, Jocelyn Y; Zhu, Allen; Zeng, Yitian; Xie, Wenxin; Kirli, Koray; Yapp, Clarence; Cicconet, Marcelo; Beliveau, Brian J; Lapan, Sylvain W; Yin, Siyuan; Lin, Millicent; Boyden, Edward S; Kaeser, Pascal S; Pihan, German; Church, George M; Yin, Peng | Nature biotechnology. | 2019 Sep; | 31427819 | |
| Dynamic Enhancer DNA Methylation as Basis for Transcriptional and Cellular Heterogeneity of ESCs. | Song, Yuelin; van den Berg, Patrick R; Markoulaki, Styliani; Soldner, Frank; Dall'Agnese, Alessandra; Henninger, Jonathan E; Drotar, Jesse; Rosenau, Nicholas; Cohen, Malkiel A; Young, Richard A; Semrau, Stefan; Stelzer, Yonatan; Jaenisch, Rudolf | Molecular cell. | 2019 09 05; | 31422875 | |
| T-Scan: A Genome-wide Method for the Systematic Discovery of T Cell Epitopes. | Kula, Tomasz; Dezfulian, Mohammad H; Wang, Charlotte I; Abdelfattah, Nouran S; Hartman, Zachary C; Wucherpfennig, Kai W; Lyerly, Herbert Kim; Elledge, Stephen J | Cell. | 2019 Aug 08; | 31398327 | |
| Delamanid Central Nervous System Pharmacokinetics in Tuberculous Meningitis in Rabbits and Humans. | Tucker, Elizabeth W; Pieterse, Lisa; Zimmerman, Matthew D; Udwadia, Zarir F; Peloquin, Charles A; Gler, Maria Tarcela; Ganatra, Shashank; Tornheim, Jeffrey A; Chawla, Prerna; Caoili, Janice C; Ritchie, Brittaney; Jain, Sanjay K; Dartois, Véronique; Dooley, Kelly E | Antimicrobial agents and chemotherapy. | 2019 Oct; | 31383662 | |
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| The Genomic Landscape of Centromeres in Cancers. | Saha, Anjan K; Mourad, Mohamad; Kaplan, Mark H; Chefetz, Ilana; Malek, Sami N; Buckanovich, Ronald; Markovitz, David M; Contreras-Galindo, Rafael | Scientific reports. | 2019 Aug 02; | 31375789 | |
| Building a Thick Mucus Hydrogel Layer to Improve the Physiological Relevance of In Vitro Primary Colonic Epithelial Models. | Wang, Y; Kim, R; Sims, C E; Allbritton, N L | Cellular and molecular gastroenterology and hepatology. | 2019; | 31356887 | |
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| Human rDNA copy number is unstable in metastatic breast cancers. | Valori, Virginia; Tus, Katalin; Laukaitis, Christina; Harris, David T; LeBeau, Lauren; Maggert, Keith A | Epigenetics. | 2019 Aug 12; | 31352858 | |
| Radiosynthesis and PET Bioimaging of 76Br-Bedaquiline in a Murine Model of Tuberculosis. | Ordonez, Alvaro A; Carroll, Laurence S; Abhishek, Sudhanshu; Mota, Filipa; Ruiz-Bedoya, Camilo A; Klunk, Mariah H; Singh, Alok K; Freundlich, Joel S; Mease, Ronnie C; Jain, Sanjay K | ACS infectious diseases. | 2019 Jul 29; | 31345032 | |
| The gut microbiota influences skeletal muscle mass and function in mice. | Lahiri, Shawon; Kim, Hyejin; Garcia-Perez, Isabel; Reza, Musarrat Maisha; Martin, Katherine A; Kundu, Parag; Cox, Laura M; Selkrig, Joel; Posma, Joram M; Zhang, Hongbo; Padmanabhan, Parasuraman; Moret, Catherine; Gulyás, Balázs; Blaser, Martin J; Auwerx, Johan; Holmes, Elaine; Nicholson, Jeremy; Wahli, Walter; Pettersson, Sven | Science translational medicine. | 2019 Jul 24; | 31341063 | |
| AGO CLIP Reveals an Activated Network for Acute Regulation of Brain Glutamate Homeostasis in Ischemic Stroke. | Kobayashi, Mariko; Benakis, Corinne; Anderson, Corey; Moore, Michael J; Poon, Carrie; Uekawa, Ken; Dyke, Jonathan P; Fak, John J; Mele, Aldo; Park, Christopher Y; Zhou, Ping; Anrather, Josef; Iadecola, Costantino; Darnell, Robert B | Cell reports. | 2019 Jul 23; | 31340158 | |
| Advances in the automation of whole-cell patch clamp technology. | Suk, Ho-Jun; Boyden, Edward S; van Welie, Ingrid | Journal of neuroscience methods. | 2019 10 01; | 31336060 | |
| Mosaic representations of odors in the input and output layers of the mouse olfactory bulb. | Chae, Honggoo; Kepple, Daniel R; Bast, Walter G; Murthy, Venkatesh N; Koulakov, Alexei A; Albeanu, Dinu F | Nature neuroscience. | 2019 Aug; | 31332371 | |
| Estimating and testing the microbial causal mediation effect with high-dimensional and compositional microbiome data. | Wang, Chan; Hu, Jiyuan; Blaser, Martin J; Li, Huilin | Bioinformatics (Oxford, England). | 2020 01 15; | 31329243 | |
| Dual-polarization analog optical phase conjugation for focusing light through scattering media. | Cheng, Zhongtao; Yang, Jiamiao; Wang, Lihong V | Applied physics letters. | 2019 Jun 10; | 31312071 | |
| Total-Body Dynamic Reconstruction and Parametric Imaging on the uEXPLORER. | Zhang, Xuezhu; Xie, Zhaoheng; Berg, Eric; Judenhofer, Martin S; Liu, Weiping; Xu, Tianyi; Ding, Yu; Lv, Yang; Dong, Yun; Deng, Zilin; Tang, Songsong; Shi, Hongcheng; Hu, Pengcheng; Chen, Shuguang; Bao, Jun; Li, Hongdi; Zhou, Jian; Wang, Guobao; Cherry, Si | Journal of nuclear medicine : official publication, Society of Nuclear Medicine. | 2020 02; | 31302637 | |
| A cytosine deaminase for programmable single-base RNA editing. | Abudayyeh, Omar O; Gootenberg, Jonathan S; Franklin, Brian; Koob, Jeremy; Kellner, Max J; Ladha, Alim; Joung, Julia; Kirchgatterer, Paul; Cox, David B T; Zhang, Feng | Science (New York, N.Y.). | 2019 07 26; | 31296651 | |
| Longitudinal changes of microbiome composition and microbial metabolomics after surgical weight loss in individuals with obesity. | Shen, Nan; Caixàs, Assumpta; Ahlers, Michael; Patel, Kapila; Gao, Zhan; Dutia, Roxanne; Blaser, Martin J; Clemente, Jose C; Laferrère, Blandine | Surgery for obesity and related diseases : official journal of the American Society for Bariatric Surgery. | 2019 Aug; | 31296445 | |
| Caspase-8 restricts antiviral CD8 T cell hyperaccumulation. | Feng, Yanjun; Daley-Bauer, Lisa P; Roback, Linda; Guo, Hongyan; Koehler, Heather S; Potempa, Marc; Lanier, Lewis L; Mocarski, Edward S | Proceedings of the National Academy of Sciences of the United States of America. | 2019 Jul 23; | 31285326 | |
| Battery-free, fully implantable optofluidic cuff system for wireless optogenetic and pharmacological neuromodulation of peripheral nerves. | Zhang, Yi; Mickle, Aaron D; Gutruf, Philipp; McIlvried, Lisa A; Guo, Hexia; Wu, Yixin; Golden, Judith P; Xue, Yeguang; Grajales-Reyes, Jose G; Wang, Xueju; Krishnan, Siddharth; Xie, Yiwen; Peng, Dongsheng; Su, Chun-Ju; Zhang, Fengyi; Reeder, Jonathan T; Vogt, Sherri K; Huang, Yonggang; Rogers, John A; Gereau 4th, Robert W | Science advances. | 2019 Jul; | 31281895 | |
| Multi-immersion open-top light-sheet microscope for high-throughput imaging of cleared tissues. | Glaser, Adam K; Reder, Nicholas P; Chen, Ye; Yin, Chengbo; Wei, Linpeng; Kang, Soyoung; Barner, Lindsey A; Xie, Weisi; McCarty, Erin F; Mao, Chenyi; Halpern, Aaron R; Stoltzfus, Caleb R; Daniels, Jonathan S; Gerner, Michael Y; Nicovich, Philip R; Vaughan, | Nature communications. | 2019 Jul 04; | 31273194 | |
| Kidney-in-a-lymph node: A novel organogenesis assay to model human renal development and test nephron progenitor cell fates. | Francipane, Maria Giovanna; Han, Bing; Oxburgh, Leif; Sims-Lucas, Sunder; Li, Zhongwei; Lagasse, Eric | Journal of tissue engineering and regenerative medicine. | 2019 Sep; | 31267702 | |
| CAESNet: Convolutional AutoEncoder based Semi-supervised Network for improving multiclass classification of endomicroscopic images. | Tong, Li; Wu, Hang; Wang, May D | Journal of the American Medical Informatics Association : JAMIA. | 2019 11 01; | 31260038 | |
| Neuroligin-4 Regulates Excitatory Synaptic Transmission in Human Neurons. | Marro, Samuele G; Chanda, Soham; Yang, Nan; Janas, Justyna A; Valperga, Giulio; Trotter, Justin; Zhou, Bo; Merrill, Sean; Yousif, Issa; Shelby, Hannah; Vogel, Hannes; Kalani, M Yashar S; Südhof, Thomas C; Wernig, Marius | Neuron. | 2019 08 21; | 31257103 | |
| The dormancy-specific regulator, SutA, is intrinsically disordered and modulates transcription initiation in Pseudomonas aeruginosa. | Bergkessel, Megan; Babin, Brett M; VanderVelde, David; Sweredoski, Michael J; Moradian, Annie; Eggleston-Rangel, Roxana; Hess, Sonja; Tirrell, David A; Artsimovitch, Irina; Newman, Dianne K | Molecular microbiology. | 2019 Sep; | 31254296 | |
| The rostromedial tegmental nucleus: a key modulator of pain and opioid analgesia. | Taylor, Norman E; Long, Hu; Pei, JunZhu; Kukutla, Phanidhar; Phero, Anthony; Hadaegh, Farnaz; Abdelnabi, Ahmed; Solt, Ken; Brenner, Gary J | Pain. | 2019 11; | 31246732 | |
| Allosteric modulation of a human protein kinase with monobodies. | Zorba, Adelajda; Nguyen, Vy; Koide, Akiko; Hoemberger, Marc; Zheng, Yuejiao; Kutter, Steffen; Kim, Chansik; Koide, Shohei; Kern, Dorothee | Proceedings of the National Academy of Sciences of the United States of America. | 2019 Jul 09; | 31239342 | |
| Effects of Integrated Brain, Body, and Social (IBBS) intervention on ERP measures of attentional control in children with ADHD. | Smith, Stephanie D; Crowley, Michael J; Ferrey, Anne; Ramsey, Kathleen; Wexler, Bruce E; Leckman, James F; Sukhodolsky, Denis G | Psychiatry research. | 2019 Aug; | 31233935 | |
| DNA Microscopy: Optics-free Spatio-genetic Imaging by a Stand-Alone Chemical Reaction. | Weinstein, Joshua A; Regev, Aviv; Zhang, Feng | Cell. | 2019 06 27; | 31230717 | |
| Atlas of Subcellular RNA Localization Revealed by APEX-Seq. | Fazal, Furqan M; Han, Shuo; Parker, Kevin R; Kaewsapsak, Pornchai; Xu, Jin; Boettiger, Alistair N; Chang, Howard Y; Ting, Alice Y | Cell. | 2019 Jul 11; | 31230715 | |
| Genome wide analysis of 3' UTR sequence elements and proteins regulating mRNA stability during maternal-to-zygotic transition in zebrafish. | Vejnar, Charles E; Abdel Messih, Mario; Takacs, Carter M; Yartseva, Valeria; Oikonomou, Panos; Christiano, Romain; Stoeckius, Marlon; Lau, Stephanie; Lee, Miler T; Beaudoin, Jean-Denis; Musaev, Damir; Darwich-Codore, Hiba; Walther, Tobias C; Tavazoie, Sae | Genome research. | 2019 07; | 31227602 | |
| PennPET Explorer: Design and Preliminary Performance of a Whole-body Imager. | Karp, Joel S; Vishwanath, Varsha; Geagan, Michael; Muehllehner, Gerd; Pantel, Austin; Parma, Michael; Perkins, Amy; Schmall, Jeffrey; Werner, Matthew; Daube-Witherspoon, Margaret E | Journal of nuclear medicine : official publication, Society of Nuclear Medicine. | 2019 Jun 21; | 31227573 | |
| Nucleic Acid Detection of Plant Genes Using CRISPR-Cas13. | Abudayyeh, Omar O; Gootenberg, Jonathan S; Kellner, Max J; Zhang, Feng | The CRISPR journal. | 2019 06; | 31225754 | |
| Simultaneous motor preparation and execution in a last-moment reach correction task. | Ames, K Cora; Ryu, Stephen I; Shenoy, Krishna V | Nature communications. | 2019 06 20; | 31221968 | |
| Ten quick tips for effective dimensionality reduction. | Nguyen, Lan Huong; Holmes, Susan | PLoS computational biology. | 2019 06; | 31220072 | |
| Modelling diastolic dysfunction in induced pluripotent stem cell-derived cardiomyocytes from hypertrophic cardiomyopathy patients. | Wu, Haodi; Yang, Huaxiao; Rhee, June-Wha; Zhang, Joe Z; Lam, Chi Keung; Sallam, Karim; Chang, Alex C Y; Ma, Ning; Lee, Jaecheol; Zhang, Hao; Blau, Helen M; Bers, Donald M; Wu, Joseph C | European heart journal. | 2019 12 01; | 31219556 | |
| Dual lineage tracing shows that glomerular parietal epithelial cells can transdifferentiate toward the adult podocyte fate. | Kaverina, Natalya V; Eng, Diana G; Freedman, Benjamin S; Kutz, J Nathan; Chozinski, Tyler J; Vaughan, Joshua C; Miner, Jeffrey H; Pippin, Jeffrey W; Shankland, Stuart J | Kidney international. | 2019 Mar 29; | 31200942 | |
| Exact distance measurements for structure and dynamics in solid proteins by fast-magic-angle-spinning NMR. | Grohe, Kristof; Nimerovsky, Evgeny; Singh, Himanshu; Vasa, Suresh K; Söldner, Benedikt; Vögeli, Beat; Rienstra, Chad M; Linser, Rasmus | Chemical communications (Cambridge, England). | 2019 Jul 14; | 31199417 | |
| A meta-analysis of procedures to change implicit measures. | Forscher, Patrick S; Lai, Calvin K; Axt, Jordan R; Ebersole, Charles R; Herman, Michelle; Devine, Patricia G; Nosek, Brian A | Journal of personality and social psychology. | 2019 Sep; | 31192631 | |
| Therapeutic Effect of Y-27632 on Tumorigenesis and Cisplatin-Induced Peripheral Sensory Loss through RhoA-NF-κB. | Zhu, Yi; Howard, George A; Pittman, Keith; Boykin, Christi; Herring, Laura E; Wilkerson, Emily M; Verbanac, Kathryn; Lu, Qun | Molecular cancer research : MCR | 2019 09 | 31189689 | |
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| Age Mosaicism across Multiple Scales in Adult Tissues. | Arrojo E Drigo, Rafael; Lev-Ram, Varda; Tyagi, Swati; Ramachandra, Ranjan; Deerinck, Thomas; Bushong, Eric; Phan, Sebastien; Orphan, Victoria; Lechene, Claude; Ellisman, Mark H; Hetzer, Martin W | Cell metabolism. | 2019 08 06; | 31178361 | |
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| Accurate Estimation of Neural Population Dynamics without Spike Sorting. | Trautmann, Eric M; Stavisky, Sergey D; Lahiri, Subhaneil; Ames, Katherine C; Kaufman, Matthew T; O'Shea, Daniel J; Vyas, Saurabh; Sun, Xulu; Ryu, Stephen I; Ganguli, Surya; Shenoy, Krishna V | Neuron. | 2019 07 17; | 31171448 | |
| Specific factors in blood from young but not old mice directly promote synapse formation and NMDA-receptor recruitment. | Gan, Kathlyn J; Südhof, Thomas C | Proceedings of the National Academy of Sciences of the United States of America. | 2019 Jun 18; | 31160442 | |
| Direct Reprogramming of Human Neurons Identifies MARCKSL1 as a Pathogenic Mediator of Valproic Acid-Induced Teratogenicity. | Chanda, Soham; Ang, Cheen Euong; Lee, Qian Yi; Ghebrial, Michael; Haag, Daniel; Shibuya, Yohei; Wernig, Marius; Südhof, Thomas C | Cell stem cell. | 2019 Jul 03; | 31155484 | |
| Enteric hyperoxaluria: role of microbiota and antibiotics. | Liu, Menghan; Nazzal, Lama | Current opinion in nephrology and hypertension. | 2019 07; | 31145706 | |
| Human cGAS catalytic domain has an additional DNA-binding interface that enhances enzymatic activity and liquid-phase condensation. | Xie, Wei; Lama, Lodoe; Adura, Carolina; Tomita, Daisuke; Glickman, J Fraser; Tuschl, Thomas; Patel, Dinshaw J | Proceedings of the National Academy of Sciences of the United States of America. | 2019 Jun 11; | 31142647 | |
| Whole-genome deep-learning analysis identifies contribution of noncoding mutations to autism risk. | Zhou, Jian; Park, Christopher Y; Theesfeld, Chandra L; Wong, Aaron K; Yuan, Yuan; Scheckel, Claudia; Fak, John J; Funk, Julien; Yao, Kevin; Tajima, Yoko; Packer, Alan; Darnell, Robert B; Troyanskaya, Olga G | Nature genetics. | 2019 06; | 31133750 | |
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| Glutamate spillover in C. elegans triggers repetitive behavior through presynaptic activation of MGL-2/mGluR5. | Katz, Menachem; Corson, Francis; Keil, Wolfgang; Singhal, Anupriya; Bae, Andrea; Lu, Yun; Liang, Yupu; Shaham, Shai | Nature communications. | 2019 04 23; | 31015396 | |
| Citrullination of fibronectin alters integrin clustering and focal adhesion stability promoting stromal cell invasion. | Stefanelli, Victoria L; Choudhury, Shilpa; Hu, Ping; Liu, Yining; Schwenzer, Anja; Yeh, Chiuan-Ren; Chambers, Dwight M; Pesson, Kelly; Li, Wei; Segura, Tatiana; Midwood, Kim S; Torres, Matthew; Barker, Thomas H | Matrix biology : journal of the International Society for Matrix Biology. | 2019 09; | 31004743 | |
| Enzyme-responsive progelator cyclic peptides for minimally invasive delivery to the heart post-myocardial infarction. | Carlini, Andrea S; Gaetani, Roberto; Braden, Rebecca L; Luo, Colin; Christman, Karen L; Gianneschi, Nathan C | Nature communications. | 2019 04 15; | 30988291 | |
| Microfluidics-Based Organism Isolation from Whole Blood: An Emerging Tool for Bloodstream Infection Diagnosis. | Burklund, Alison; Zhang, John X J | Annals of biomedical engineering. | 2019 Jul; | 30980291 | |
| Development of a Synthetic 3-ketosteroid ?1-dehydrogenase for the Generation of a Novel Catabolic Pathway Enabling Cholesterol Degradation in Human Cells. | D'Arcy, Brandon M; Swingle, Mark R; Schambeau, Lindsay; Pannell, Lewis; Prakash, Aishwarya; Honkanen, Richard E | Scientific reports. | 2019 Apr 12; | 30979909 | |
| Characterization of Lipid-Protein Interactions and Lipid-Mediated Modulation of Membrane Protein Function through Molecular Simulation. | Muller, Melanie P; Jiang, Tao; Sun, Chang; Lihan, Muyun; Pant, Shashank; Mahinthichaichan, Paween; Trifan, Anda; Tajkhorshid, Emad | Chemical reviews. | 2019 May 08; | 30978005 | |
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| Wireless resonant circuits for the minimally invasive sensing of biophysical processes in magnetic resonance imaging. | Hai, Aviad; Spanoudaki, Virginia Ch; Bartelle, Benjamin B; Jasanoff, Alan | Nature biomedical engineering | 2019 01 | 30932065 | |
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| Relationship Between Sleep Quality and Mood: Ecological Momentary Assessment Study. | Triantafillou, Sofia; Saeb, Sohrab; Lattie, Emily G; Mohr, David C; Kording, Konrad Paul | JMIR mental health. | 2019 Mar 27; | 30916663 | |
| A BODIPY-Based Donor/Donor-Acceptor System: Towards Highly Efficient Long-Wavelength-Excitable Near-IR Polymer Dots with Narrow and Strong Absorption Features. | Chen, Lei; Chen, Dandan; Jiang, Yifei; Zhang, Jicheng; Yu, Jiangbo; DuFort, Christopher C; Hingorani, Sunil R; Zhang, Xuanjun; Wu, Changfeng; Chiu, Daniel T | Angewandte Chemie (International ed. in English). | 2019 Mar 25; | 30912228 | |
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| Matrix Metalloproteinases in Pulmonary and Central Nervous System Tuberculosis-A Review. | Rohlwink, Ursula K; Walker, Naomi F; Ordonez, Alvaro A; Li, Yifan J; Tucker, Elizabeth W; Elkington, Paul T; Wilkinson, Robert J; Wilkinson, Katalin A | International journal of molecular sciences. | 2019 Mar 18; | 30889803 | |
| Escape From Oblivion: Neural Mechanisms of Emergence From General Anesthesia. | Kelz, Max B; García, Paul S; Mashour, George A; Solt, Ken | Anesthesia and analgesia. | 2019 04; | 30883418 | |
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| Multi-sensory Gamma Stimulation Ameliorates Alzheimer's-Associated Pathology and Improves Cognition. | Martorell, Anthony J; Paulson, Abigail L; Suk, Ho-Jun; Abdurrob, Fatema; Drummond, Gabrielle T; Guan, Webster; Young, Jennie Z; Kim, David Nam-Woo; Kritskiy, Oleg; Barker, Scarlett J; Mangena, Vamsi; Prince, Stephanie M; Brown, Emery N; Chung, Kwanghun; Boyden, Edward S; Singer, Annabelle C; Tsai, Li-Huei | Cell. | 2019 Apr 04; | 30879788 | |
| The effects of trans-resveratrol on insulin resistance, inflammation, and microbiota in men with the metabolic syndrome: A pilot randomized, placebo-controlled clinical trial. | Walker, Jeanne M; Eckardt, Patricia; Aleman, Jose O; da Rosa, Joel Correa; Liang, Yupu; Iizumi, Tadasu; Etheve, Stephane; Blaser, Martin J; L Breslow, Jan; Holt, Peter R | Journal of clinical and translational research. | 2019 Jan 10; | 30873501 | |
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| Single capillary oximetry and tissue ultrastructural sensing by dual-band dual-scan inverse spectroscopic optical coherence tomography. | Liu, Rongrong; Winkelmann, James A; Spicer, Graham; Zhu, Yunxiao; Eid, Aya; Ameer, Guillermo A; Backman, Vadim; Yi, Ji | Light, science & applications. | 2018; | 30839641 | |
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| Targeted Drug Delivery and Image-Guided Therapy of Heterogeneous Ovarian Cancer Using HER2-Targeted Theranostic Nanoparticles. | Satpathy, Minati; Wang, Liya; Zielinski, Rafal J; Qian, Weiping; Wang, Y Andrew; Mohs, Aaron M; Kairdolf, Brad A; Ji, Xin; Capala, Jacek; Lipowska, Malgorzata; Nie, Shuming; Mao, Hui; Yang, Lily | Theranostics. | 2019; | 30809308 | |
| Biomaterial Scaffolds Recruit an Aggressive Population of Metastatic Tumor Cells In Vivo. | Bushnell, Grace G; Hardas, Tejaswini P; Hartfield, Rachel M; Zhang, Yining; Oakes, Robert S; Ronquist, Scott; Chen, Haiming; Rajapakse, Indika; Wicha, Max S; Jeruss, Jacqueline S; Shea, Lonnie D | Cancer research. | 2019 Apr 15; | 30808673 | |
| Quantitative quality-control metrics for in vivo oximetry in small vessels by visible light optical coherence tomography angiography. | Liu, Rongrong; Song, Weiye; Backman, Vadim; Yi, Ji | Biomedical optics express. | 2019 Feb 01; | 30800493 | |
| Engineering for Success: Approaches to Improve Chimeric Antigen Receptor T Cell Therapy for Solid Tumors. | Mata, Melinda; Gottschalk, Stephen | Drugs. | 2019 Mar; | 30796733 | |
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| Hachimoji DNA and RNA: A genetic system with eight building blocks. | Hoshika, Shuichi; Leal, Nicole A; Kim, Myong-Jung; Kim, Myong-Sang; Karalkar, Nilesh B; Kim, Hyo-Joong; Bates, Alison M; Watkins Jr, Norman E; SantaLucia, Holly A; Meyer, Adam J; DasGupta, Saurja; Piccirilli, Joseph A; Ellington, Andrew D; SantaLucia Jr, | Science (New York, N.Y.). | 2019 02 22; | 30792304 | |
| Chemically Inducible Chromosomal Evolution (CIChE) for Multicopy Metabolic Pathway Engineering. | Love, Aaron M; Biggs, Bradley W; Tyo, Keith E J; Ajikumar, Parayil Kumaran | Methods in molecular biology (Clifton, N.J.). | 2019; | 30788784 | |
| Photoacoustic computed tomography of human extremities. | Wray, Parker; Lin, Li; Hu, Peng; Wang, Lihong V | Journal of biomedical optics. | 2019 Feb; | 30784244 | |
| Two eARCHT3.0 Lines for Optogenetic Silencing of Dopaminergic and Serotonergic Neurons. | Krol, Alexandra; Lopez-Huerta, Violeta G; Corey, Taylor E C; Deisseroth, Karl; Ting, Jonathan T; Feng, Guoping | Frontiers in neural circuits. | 2019; | 30774584 | |
| Detection of Low-Abundance Metabolites in Live Cells Using an RNA Integrator. | You, Mingxu; Litke, Jacob L; Wu, Rigumula; Jaffrey, Samie R | Cell chemical biology. | 2019 Apr 18; | 30773480 | |
| Ultrafast microfluidic synthesis of hierarchical triangular silver core-silica shell nanoplatelet toward enhanced cellular internalization. | Hao, Nanjing; Nie, Yuan; Xu, Zhe; Zhang, John X J | Journal of colloid and interface science. | 2019 Apr 15; | 30771632 | |
| PLAIDOH: a novel method for functional prediction of long non-coding RNAs identifies cancer-specific LncRNA activities. | Pyfrom, Sarah C; Luo, Hong; Payton, Jacqueline E | BMC genomics. | 2019 Feb 15; | 30767760 | |
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| Each Medium Tells a Different Story: The Effect of Message Channel on Narrative Persuasion. | Walter, Nathan; Murphy, Sheila T; Frank, Lauren B; Baezconde-Garbanati, Lourdes | Communication research reports : CRR. | 2017; | 30739986 | |
| Stem Cell Quiescence: Dynamism, Restraint, and Cellular Idling. | van Velthoven, Cindy T J; Rando, Thomas A | Cell stem cell. | 2019 Feb 07; | 30735649 | |
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| First Human Imaging Studies with the EXPLORER Total-Body PET Scanner. | Badawi, Ramsey D; Shi, Hongcheng; Hu, Pengcheng; Chen, Shuguang; Xu, Tianyi; Price, Patricia M; Ding, Yu; Spencer, Benjamin A; Nardo, Lorenzo; Liu, Weiping; Bao, Jun; Jones, Terry; Li, Hongdi; Cherry, Simon R | Journal of nuclear medicine : official publication, Society of Nuclear Medicine. | 2019 Mar; | 30733314 | |
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| Single-molecule sequencing detection of N6-methyladenine in microbial reference materials. | McIntyre, Alexa B R; Alexander, Noah; Grigorev, Kirill; Bezdan, Daniela; Sichtig, Heike; Chiu, Charles Y; Mason, Christopher E | Nature communications | 2019 02 04 | 30718479 | |
| Determining the pharmacokinetics of nicotinic drugs in the endoplasmic reticulum using biosensors. | Shivange, Amol V; Borden, Philip M; Muthusamy, Anand K; Nichols, Aaron L; Bera, Kallol; Bao, Huan; Bishara, Ishak; Jeon, Janice; Mulcahy, Matthew J; Cohen, Bruce; O'Riordan, Saidhbhe L; Kim, Charlene; Dougherty, Dennis A; Chapman, Edwin R; Marvin, Jonatha | The Journal of general physiology. | 2019 Jun 03; | 30718376 | |
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| Peridinin Is an Exceptionally Potent and Membrane-Embedded Inhibitor of Bilayer Lipid Peroxidation. | Haley, Hannah M S; Hill, Adam G; Greenwood, Alexander I; Woerly, Eric M; Rienstra, Chad M; Burke, Martin D | Journal of the American Chemical Society. | 2018 Nov 14; | 30388000 | |
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| Systemic Upregulation of IL-10 (Interleukin-10) Using a Nonimmunogenic Vector Reduces Growth and Rate of Dissecting Abdominal Aortic Aneurysm. | Adam, Matti; Kooreman, Nigel Geoffrey; Jagger, Ann; Wagenhäuser, Markus U; Mehrkens, Dennis; Wang, Yongming; Kayama, Yosuke; Toyama, Kensuke; Raaz, Uwe; Schellinger, Isabel N; Maegdefessel, Lars; Spin, Joshua M; Hamming, Jaap F; Quax, Paul H A; Baldus, Stephan; Wu, Joseph C; Tsao, Philip S | Arteriosclerosis, thrombosis, and vascular biology. | 2018 08; | 29880489 | |
| Insulin Hexamer-Caged Gadolinium Ion as MRI Contrast-o-phore. | Taylor, Steven K; Tran, Timothy H; Liu, Michael Z; Harris, Paul E; Sun, Yanping; Jambawalikar, Sachin R; Tong, Liang; Stojanovic, Milan N | Chemistry (Weinheim an der Bergstrasse, Germany). | 2018 Jul 25; | 29873848 | |
| Latent variable modeling for the microbiome. | Sankaran, Kris; Holmes, Susan P | Biostatistics (Oxford, England). | 2018 Jun 03; | 29868846 | |
| Left-Lateralized Contributions of Saccades to Cortical Activity During a One-Back Word Recognition Task. | Chang, Yu-Cherng C; Khan, Sheraz; Taulu, Samu; Kuperberg, Gina; Brown, Emery N; Hämäläinen, Matti S; Temereanca, Simona | Frontiers in neural circuits. | 2018; | 29867372 | |
| Transdifferentiation of human adult peripheral blood T cells into neurons. | Tanabe, Koji; Ang, Cheen Euong; Chanda, Soham; Olmos, Victor Hipolito; Haag, Daniel; Levinson, Douglas F; Südhof, Thomas C; Wernig, Marius | Proceedings of the National Academy of Sciences of the United States of America. | 2018 06 19; | 29866841 | |
| APOE4 Causes Widespread Molecular and Cellular Alterations Associated with Alzheimer's Disease Phenotypes in Human iPSC-Derived Brain Cell Types. | Lin, Yuan-Ta; Seo, Jinsoo; Gao, Fan; Feldman, Heather M; Wen, Hsin-Lan; Penney, Jay; Cam, Hugh P; Gjoneska, Elizabeta; Raja, Waseem K; Cheng, Jemmie; Rueda, Richard; Kritskiy, Oleg; Abdurrob, Fatema; Peng, Zhuyu; Milo, Blerta; Yu, Chung Jong; Elmsaouri, S | Neuron. | 2018 Jun 27; | 29861287 | |
| Patient preferences for Personalized (N-of-1) Trials: A conjoint analysis. | Moise, Nathalie; Wood, Dallas; Kuen K Cheung, Ying; Duan, Naihua; Onge, Tara St; Duer-Hefele, Joan; Pu, Tiffany; Davidson, Karina W; Kronish, Ian M; members of the ?Personalized Trial Collaboratory? | Journal of clinical epidemiology. | 2018 May 30; | 29859242 | |
| Innovations in Instrumentation for Positron Emission Tomography. | Berg, Eric; Cherry, Simon R | Seminars in nuclear medicine. | 2018 Jul; | 29852942 | |
| Aptamer Recognition of Multiplexed Small-Molecule-Functionalized Substrates. | Nakatsuka, Nako; Cao, Huan H; Deshayes, Stephanie; Melkonian, Arin L; Kasko, Andrea M; Weiss, Paul S; Andrews, Anne M | ACS applied materials & interfaces. | 2018 Jul 18; | 29851335 | |
| ZFP36 RNA-binding proteins restrain T cell activation and anti-viral immunity. | Moore, Michael J; Blachere, Nathalie E; Fak, John J; Park, Christopher Y; Sawicka, Kirsty; Parveen, Salina; Zucker-Scharff, Ilana; Moltedo, Bruno; Rudensky, Alexander Y; Darnell, Robert B | eLife. | 2018 05 31; | 29848443 | |
| Social stress shortens lifespan in mice. | Razzoli, Maria; Nyuyki-Dufe, Kewir; Gurney, Allison; Erickson, Connor; McCallum, Jacob; Spielman, Nicholas; Marzullo, Marta; Patricelli, Jessica; Kurata, Morito; Pope, Emily A; Touma, Chadi; Palme, Rupert; Largaespada, David A; Allison, David B; Bartolomucci, Alessandro | Aging cell. | 2018 08; | 29806171 | |
| Theoretical study of the benefit of long axial field-of-view PET on region of interest quantification. | Zhang, Xuezhu; Badawi, Ramsey D; Cherry, Simon R; Qi, Jinyi | Physics in medicine and biology. | 2018 Jun 27; | 29799814 | |
| A Near-Complete Spatial Map of Olfactory Receptors in the Mouse Main Olfactory Epithelium. | Tan, Longzhi; Xie, Xiaoliang Sunney | Chemical senses. | 2018 Jul 05; | 29796642 | |
| Prediction of response to drug therapy in psychiatric disorders. | Stern, Shani; Linker, Sara; Vadodaria, Krishna C; Marchetto, Maria C; Gage, Fred H | Open biology | 2018 05 | 29794033 | |
| Chemoproteomics of matrix metalloproteases in a model of cartilage degeneration suggests functional biomarkers associated with posttraumatic osteoarthritis. | Ravindra, Kodihalli C; Ahrens, Caroline C; Wang, Yang; Ramseier, Julie Y; Wishnok, John S; Griffith, Linda G; Grodzinsky, Alan J; Tannenbaum, Steven R | The Journal of biological chemistry. | 2018 07 20; | 29794029 | |
| Electroencephalographic markers of brain development during sevoflurane anaesthesia in children up to 3 years old. | Cornelissen, L; Kim, S E; Lee, J M; Brown, E N; Purdon, P L; Berde, C B | British journal of anaesthesia. | 2018 Jun; | 29793594 | |
| Optogenetic Induction of Colonic Motility in Mice. | Hibberd, Timothy J; Feng, Jing; Luo, Jialie; Yang, Pu; Samineni, Vijay K; Gereau 4th, Robert W; Kelley, Nigel; Hu, Hongzhen; Spencer, Nick J | Gastroenterology. | 2018 May 18; | 29782847 | |
| Analysis of Genetically Diverse Macrophages Reveals Local and Domain-wide Mechanisms that Control Transcription Factor Binding and Function. | Link, Verena M; Duttke, Sascha H; Chun, Hyun B; Holtman, Inge R; Westin, Emma; Hoeksema, Marten A; Abe, Yohei; Skola, Dylan; Romanoski, Casey E; Tao, Jenhan; Fonseca, Gregory J; Troutman, Ty D; Spann, Nathanael J; Strid, Tobias; Sakai, Mashito; Yu, Miao; | Cell. | 2018 Jun 14; | 29779944 | |
| Tuberculous meningitis: a roadmap for advancing basic and translational research. | Jain, Sanjay K; Tobin, David M; Tucker, Elizabeth W; Venketaraman, Vishwanath; Ordonez, Alvaro A; Jayashankar, Lakshmi; Siddiqi, Omar K; Hammoud, Dima A; Prasadarao, Nemani V; Sandor, Matyas; Hafner, Richard; Fabry, Zsuzsanna; NIH Tuberculous Meningitis W | Nature immunology. | 2018 Jun; | 29777209 | |
| Digital Museum of Retinal Ganglion Cells with Dense Anatomy and Physiology. | Bae, J Alexander; Mu, Shang; Kim, Jinseop S; Turner, Nicholas L; Tartavull, Ignacio; Kemnitz, Nico; Jordan, Chris S; Norton, Alex D; Silversmith, William M; Prentki, Rachel; Sorek, Marissa; David, Celia; Jones, Devon L; Bland, Doug; Sterling, Amy L R; Park, Jungman; Briggman, Kevin L; Seung, H Sebastian; Eyewirers | Cell. | 2018 05 17; | 29775596 | |
| Bioengineering strategies to accelerate stem cell therapeutics. | Madl, Christopher M; Heilshorn, Sarah C; Blau, Helen M | Nature. | 2018 05; | 29769665 | |
| ERMrest: A Collaborative Data Catalog with Fine Grain Access Control. | Czajkowski, Karl; Kesselman, Carl; Schuler, Robert | Proceedings ... IEEE International Conference on eScience. IEEE International Conference on eScience. | 2017 Oct; | 29756002 | |
| Experiences with Deriva: An Asset Management Platform for Accelerating eScience. | Bugacov, Alejandro; Czajkowski, Karl; Kesselman, Carl; Kumar, Anoop; Schuler, Robert E; Tangmunarunkit, Hongsuda | Proceedings ... IEEE International Conference on eScience. IEEE International Conference on eScience. | 2017 Oct; | 29756001 | |
| Discovery of proteins associated with a predefined genomic locus via dCas9-APEX-mediated proximity labeling. | Myers, Samuel A; Wright, Jason; Peckner, Ryan; Kalish, Brian T; Zhang, Feng; Carr, Steven A | Nature methods. | 2018 06; | 29735997 | |
| Corticoamygdala Transfer of Socially Derived Information Gates Observational Learning. | Allsop, Stephen A; Wichmann, Romy; Mills, Fergil; Burgos-Robles, Anthony; Chang, Chia-Jung; Felix-Ortiz, Ada C; Vienne, Alienor; Beyeler, Anna; Izadmehr, Ehsan M; Glober, Gordon; Cum, Meghan I; Stergiadou, Johanna; Anandalingam, Kavitha K; Farris, Kathryn; Namburi, Praneeth; Leppla, Christopher A; Weddington, Javier C; Nieh, Edward H; Smith, Anne C; Ba, Demba; Brown, Emery N; Tye, Kay M | Cell. | 2018 May 31; | 29731170 | |
| Autism-associated neuroligin-4 mutation selectively impairs glycinergic synaptic transmission in mouse brainstem synapses. | Zhang, Bo; Gokce, Ozgun; Hale, W Dylan; Brose, Nils; Südhof, Thomas C | The Journal of experimental medicine. | 2018 06 04; | 29724786 | |
| High-resolution mapping of DNA polymerase fidelity using nucleotide imbalances and next-generation sequencing. | de Paz, Alexandra M; Cybulski, Thaddeus R; Marblestone, Adam H; Zamft, Bradley M; Church, George M; Boyden, Edward S; Kording, Konrad P; Tyo, Keith E J | Nucleic acids research | 2018 07 27 | 29718339 | |
| Droplet Digital PCR for Absolute Quantification of Extracellular MicroRNAs in Plasma and Serum: Quantification of the Cancer Biomarker hsa-miR-141. | Giraldez, Maria D; Chevillet, John R; Tewari, Muneesh | Methods in molecular biology (Clifton, N.J.). | 2018; | 29717459 | |
| [11C]Para-Aminobenzoic Acid: A Positron Emission Tomography Tracer Targeting Bacteria-Specific Metabolism. | Mutch, Christopher A; Ordonez, Alvaro A; Qin, Hecong; Parker, Matthew; Bambarger, Lauren E; Villanueva-Meyer, Javier E; Blecha, Joseph; Carroll, Valerie; Taglang, Celine; Flavell, Robert; Sriram, Renuka; VanBrocklin, Henry; Rosenberg, Oren; Ohliger, Micha | ACS infectious diseases. | 2018 Jul 13; | 29712422 | |
| Retrievable hydrogels for ovarian follicle transplantation and oocyte collection. | Rios, Peter D; Kniazeva, Ekaterina; Lee, Hoi Chang; Xiao, Shuo; Oakes, Robert S; Saito, Eiji; Jeruss, Jacqueline S; Shikanov, Ariella; Woodruff, Teresa K; Shea, Lonnie D | Biotechnology and bioengineering. | 2018 08; | 29704433 | |
| Field-deployable viral diagnostics using CRISPR-Cas13. | Myhrvold, Cameron; Freije, Catherine A; Gootenberg, Jonathan S; Abudayyeh, Omar O; Metsky, Hayden C; Durbin, Ann F; Kellner, Max J; Tan, Amanda L; Paul, Lauren M; Parham, Leda A; Garcia, Kimberly F; Barnes, Kayla G; Chak, Bridget; Mondini, Adriano; Noguei | Science (New York, N.Y.). | 2018 04 27; | 29700266 | |
| Brief exposure to obesogenic diet disrupts brain dopamine networks. | Barry, Robert L; Byun, Nellie E; Williams, Jason M; Siuta, Michael A; Tantawy, Mohammed N; Speed, Nicole K; Saunders, Christine; Galli, Aurelio; Niswender, Kevin D; Avison, Malcolm J | PloS one. | 2018; | 29698491 | |
| Structure of the alternative complex III in a supercomplex with cytochrome oxidase. | Sun, Chang; Benlekbir, Samir; Venkatakrishnan, Padmaja; Wang, Yuhang; Hong, Sangjin; Hosler, Jonathan; Tajkhorshid, Emad; Rubinstein, John L; Gennis, Robert B | Nature. | 2018 May; | 29695868 | |
| Extended-Depth 3D Super-Resolution Imaging Using Probe-Refresh STORM. | Lin, Danying; Gagnon, Lauren A; Howard, Marco D; Halpern, Aaron R; Vaughan, Joshua C | Biophysical journal. | 2018 Apr 24; | 29694874 | |
| Formation of Human Colonic Crypt Array by Application of Chemical Gradients Across a Shaped Epithelial Monolayer. | Wang, Yuli; Kim, Raehyun; Gunasekara, Dulan B; Reed, Mark I; DiSalvo, Matthew; Nguyen, Daniel L; Bultman, Scott J; Sims, Christopher E; Magness, Scott T; Allbritton, Nancy L | Cellular and molecular gastroenterology and hepatology. | 2018; | 29693040 | |
| Superresolution imaging of Drosophila tissues using expansion microscopy. | Jiang, Nan; Kim, Hyeon-Jin; Chozinski, Tyler J; Azpurua, Jorge E; Eaton, Benjamin A; Vaughan, Joshua C; Parrish, Jay Z | Molecular biology of the cell. | 2018 Jun 15; | 29688792 | |
| The role of adult hippocampal neurogenesis in brain health and disease. | Toda, Tomohisa; Parylak, Sarah L; Linker, Sara B; Gage, Fred H | Molecular psychiatry. | 2018 Apr 20; | 29679070 | |
| Bioengineered Systems and Designer Matrices That Recapitulate the Intestinal Stem Cell Niche. | Wang, Yuli; Kim, Raehyun; Hinman, Samuel S; Zwarycz, Bailey; Magness, Scott T; Allbritton, Nancy L | Cellular and molecular gastroenterology and hepatology. | 2018 Mar; | 29675459 | |
| Unconventional function of an Achaete-Scute homolog as a terminal selector of nociceptive neuron identity. | Masoudi, Neda; Tavazoie, Saeed; Glenwinkel, Lori; Ryu, Leesun; Kim, Kyuhyung; Hobert, Oliver | PLoS biology. | 2018 04; | 29672507 | |
| Polyserotonin Nanoparticles as Multifunctional Materials for Biomedical Applications. | Nakatsuka, Nako; Hasani-Sadrabadi, Mohammad Mahdi; Cheung, Kevin M; Young, Thomas D; Bahlakeh, Ghasem; Moshaverinia, Alireza; Weiss, Paul S; Andrews, Anne M | ACS nano. | ; | 29664607 | |
| The evolution of CpG density and lifespan in conserved primate and mammalian promoters. | McLain, Adam T; Faulk, Christopher | Aging. | ; | 29661983 | |
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| Recent progress in photoacoustic molecular imaging. | Yao, Junjie; Wang, Lihong V | Current opinion in chemical biology. | 2018 Apr 06; | 29631120 | |
| The Microbe Directory: An annotated, searchable inventory of microbes' characteristics. | Shaaban, Heba; Westfall, David A; Mohammad, Rawhi; Danko, David; Bezdan, Daniela; Afshinnekoo, Ebrahim; Segata, Nicola; Mason, Christopher E | Gates open research | 2018 Jan 05 | 29630066 | |
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| Imaging Macrophage-associated Inflammation. | Foss, Catherine A; Sanchez-Bautista, Julian; Jain, Sanjay K | Seminars in nuclear medicine. | 2018 May; | 29626941 | |
| Pharmacokinetics of rifapentine and rifampin in a rabbit model of tuberculosis and correlation with clinical trial data. | Rifat, Dalin; Prideaux, Brendan; Savic, Radojka M; Urbanowski, Michael E; Parsons, Teresa L; Luna, Brian; Marzinke, Mark A; Ordonez, Alvaro A; DeMarco, Vincent P; Jain, Sanjay K; Dartois, Veronique; Bishai, William R; Dooley, Kelly E | Science translational medicine. | 2018 Apr 04; | 29618565 | |
| ''A Guide to Gutsy Living'': Patient-Driven Development of a Pediatric Ostomy Toolkit. | David, Jennie G; Jofriet, Alexander; Seid, Michael; Margolis, Peter A; ImproveCareNow Pediatric IBD Learning Health System | Pediatrics. | 2018 05; | 29610402 | |
| Antibody-mediated inhibition of MICA and MICB shedding promotes NK cell-driven tumor immunity. | Ferrari de Andrade, Lucas; Tay, Rong En; Pan, Deng; Luoma, Adrienne M; Ito, Yoshinaga; Badrinath, Soumya; Tsoucas, Daphne; Franz, Bettina; May Jr., Kenneth F; Harvey, Christopher J; Kobold, Sebastian; Pyrdol, Jason W; Yoon, Charles; Yuan, Guo-Cheng; Hodi, | Science (New York, N.Y.). | 2018 03 30; | 29599246 | |
| Establishment of human pluripotent stem cell-derived pancreatic ?-like cells in the mouse pancreas. | Ma, Haiting; Wert, Katherine J; Shvartsman, Dmitry; Melton, Douglas A; Jaenisch, Rudolf | Proceedings of the National Academy of Sciences of the United States of America. | 2018 Apr 10; | 29599125 | |
| Personalized (N-of-1) Trials for Depression: A Systematic Review. | Kronish, Ian M; Hampsey, Meghan; Falzon, Louise; Konrad, Beatrice; Davidson, Karina W | Journal of clinical psychopharmacology. | 2018 Mar 28; | 29596148 | |
| The logic of single-cell projections from visual cortex. | Han, Yunyun; Kebschull, Justus M; Campbell, Robert A A; Cowan, Devon; Imhof, Fabia; Zador, Anthony M; Mrsic-Flogel, Thomas D | Nature. | 2018 04 05; | 29590093 | |
| Are Nomothetic or Ideographic Approaches Superior in Predicting Daily Exercise Behaviors? | Cheung, Ying Kuen; Hsueh, Pei-Yun Sabrina; Qian, Min; Yoon, Sunmoo; Meli, Laura; Diaz, Keith M; Schwartz, Joseph E; Kronish, Ian M; Davidson, Karina W | Methods of information in medicine. | 2017; | 29582914 | |
| Differential 3' Processing of Specific Transcripts Expands Regulatory and Protein Diversity Across Neuronal Cell Types. | eLife. | 2018 03 26; | 29578408 | ||
| Early life experience drives structural variation of neural genomes in mice. | Bedrosian, Tracy A; Quayle, Carolina; Novaresi, Nicole; Gage, Fred H | Science (New York, N.Y.). | 2018 03 23; | 29567711 | |
| A highly adaptive microbiome-based association test for survival traits. | Koh, Hyunwook; Livanos, Alexandra E; Blaser, Martin J; Li, Huilin | BMC genomics. | 2018 03 20; | 29558893 | |
| An evolutionary hotspot defines functional differences between CRYPTOCHROMES. | Rosensweig, Clark; Reynolds, Kimberly A; Gao, Peng; Laothamatas, Isara; Shan, Yongli; Ranganathan, Rama; Takahashi, Joseph S; Green, Carla B | Nature communications. | 2018 Mar 19; | 29556064 | |
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| Predator-secreted sulfolipids induce defensive responses in C. elegans. | Liu, Zheng; Kariya, Maro J; Chute, Christopher D; Pribadi, Amy K; Leinwand, Sarah G; Tong, Ada; Curran, Kevin P; Bose, Neelanjan; Schroeder, Frank C; Srinivasan, Jagan; Chalasani, Sreekanth H | Nature communications. | 2018 Mar 19; | 29555902 | |
| Tumor characterization by ultrasound-release of multiple protein and microRNA biomarkers, preclinical and clinical evidence. | D'Souza, Aloma L; Chevillet, John R; Ghanouni, Pejman; Yan, Xinrui; Tewari, Muneesh; Gambhir, Sanjiv S | PloS one. | 2018; | 29547636 | |
| High-throughput ultraviolet photoacoustic microscopy with multifocal excitation. | Imai, Toru; Shi, Junhui; Wong, Terence T W; Li, Lei; Zhu, Liren; Wang, Lihong V | Journal of biomedical optics. | 2018 Mar; | 29546734 | |
| Development of the Human Mycobiome over the First Month of Life and across Body Sites. | Ward, Tonya L; Dominguez-Bello, Maria Gloria; Heisel, Tim; Al-Ghalith, Gabriel; Knights, Dan; Gale, Cheryl A | mSystems. | 2018 May-Jun; | 29546248 | |
| Illusory movement perception improves motor control for prosthetic hands. | Marasco, Paul D; Hebert, Jacqueline S; Sensinger, Jon W; Shell, Courtney E; Schofield, Jonathon S; Thumser, Zachary C; Nataraj, Raviraj; Beckler, Dylan T; Dawson, Michael R; Blustein, Dan H; Gill, Satinder; Mensh, Brett D; Granja-Vazquez, Rafael; Newcomb, | Science translational medicine. | 2018 Mar 14; | 29540617 | |
| Quorum-sensing regulator RhlR but not its autoinducer RhlI enables Pseudomonas to evade opsonization. | Haller, Samantha; Franchet, Adrien; Hakkim, Abdul; Chen, Jing; Drenkard, Eliana; Yu, Shen; Schirmeier, Stefanie; Li, Zi; Martins, Nelson; Ausubel, Frederick M; Liégeois, Samuel; Ferrandon, Dominique | EMBO reports. | 2018 05; | 29523648 | |
| Biomaterial Scaffolds as Pre-metastatic Niche Mimics Systemically Alter the Primary Tumor and Tumor Microenvironment. | Aguado, Brian A; Hartfield, Rachel M; Bushnell, Grace G; Decker, Joseph T; Azarin, Samira M; Nanavati, Dhaval; Schipma, Matthew J; Rao, Shreyas S; Oakes, Robert S; Zhang, Yining; Jeruss, Jacqueline S; Shea, Lonnie D | Advanced healthcare materials. | 2018 May; | 29521008 | |
| Low agreement among reviewers evaluating the same NIH grant applications. | Pier, Elizabeth L; Brauer, Markus; Filut, Amarette; Kaatz, Anna; Raclaw, Joshua; Nathan, Mitchell J; Ford, Cecilia E; Carnes, Molly | Proceedings of the National Academy of Sciences of the United States of America. | 2018 Mar 20; | 29507248 | |
| Mapping a functional cancer genome atlas of tumor suppressors in mouse liver using AAV-CRISPR-mediated direct in vivo screening. | Wang, Guangchuan; Chow, Ryan D; Ye, Lupeng; Guzman, Christopher D; Dai, Xiaoyun; Dong, Matthew B; Zhang, Feng; Sharp, Phillip A; Platt, Randall J; Chen, Sidi | Science advances. | 2018 02; | 29503867 | |
| A fusion-protein approach enabling mammalian cell production of tumor targeting protein domains for therapeutic development. | Hu, Jia; Chen, Xiang; Zhang, Xuhua; Yuan, Xiaopeng; Yang, Mingjuan; Dai, Hui; Yang, Wei; Zhou, Qinghua; Wen, Weihong; Wang, Qirui; Qin, Weijun; Zhao, Aizhi | Protein science : a publication of the Protein Society. | 2018 05; | 29500915 | |
| Proteasome inhibition blocks necroptosis by attenuating death complex aggregation. | Ali, Mohammad; Mocarski, Edward S | Cell death & disease. | 2018 Mar 01; | 29497034 | |
| Differential Regulation of Bladder Pain and Voiding Function by Sensory Afferent Populations Revealed by Selective Optogenetic Activation. | DeBerry, Jennifer J; Samineni, Vijay K; Copits, Bryan A; Sullivan, Christopher J; Vogt, Sherri K; Albers, Kathryn M; Davis, Brian M; Gereau Iv, Robert W | Frontiers in integrative neuroscience. | 2018; | 29483864 | |
| A robotic multidimensional directed evolution approach applied to fluorescent voltage reporters. | Piatkevich, Kiryl D; Jung, Erica E; Straub, Christoph; Linghu, Changyang; Park, Demian; Suk, Ho-Jun; Hochbaum, Daniel R; Goodwin, Daniel; Pnevmatikakis, Eftychios; Pak, Nikita; Kawashima, Takashi; Yang, Chao-Tsung; Rhoades, Jeffrey L; Shemesh, Or; Asano, Shoh; Yoon, Young-Gyu; Freifeld, Limor; Saulnier, Jessica L; Riegler, Clemens; Engert, Florian; Hughes, Thom; Drobizhev, Mikhail; Szabo, Balint; Ahrens, Misha B; Flavell, Steven W; Sabatini, Bernardo L; Boyden, Edward S | Nature chemical biology. | 2018 Apr; | 29483642 | |
| Molecular and Structural Traits of Insulin Receptor Substrate 1/LC3 Nuclear Structures and Their Role in Autophagy Control and Tumor Cell Survival. | Lassak, Adam; Dean, Mathew; Wyczechowska, Dorota; Wilk, Anna; Marrero, Luis; Trillo-Tinoco, Jimena; Boulares, A Hamid; Sarkaria, Jann N; Del Valle, Luis; Peruzzi, Francesca; Ochoa, Augusto; Reiss, Krzysztof | Molecular and cellular biology. | 2018 May 15; | 29483302 | |
| Short telomeres - A hallmark of heritable cardiomyopathies. | Chang, Alex C Y; Blau, Helen M | Differentiation; research in biological diversity. | 2018 Feb 09; | 29482077 | |
| Humanizing the mdx mouse model of DMD: the long and the short of it. | Yucel, Nora; Chang, Alex C; Day, John W; Rosenthal, Nadia; Blau, Helen M | NPJ Regenerative medicine | 2018 | 29479480 | |
| Biomimetic hierarchical walnut kernel-like and erythrocyte-like mesoporous silica nanomaterials: controllable synthesis and versatile applications. | Hao, Nanjing; Nie, Yuan; Zhang, John X J | Microporous and mesoporous materials : the official journal of the International Zeolite Association. | 2018 May 01; | 29479288 | |
| No Significant Effect of Maternal Perception of the Food Environment on Reproductive Success or Pup Outcomes in C57BL/6J Mice. | Gibbs, Victoria K; Schwartz, Tonia S; Johnson, Maria S; Patki, Amit; Nagy, Tim R; George, Brandon J; Allison, David B | Obesity (Silver Spring, Md.). | 2018 Apr; | 29476611 | |
| Co-Designing a Collaborative Chronic Care Network (C3N) for Inflammatory Bowel Disease: Development of Methods. | Seid, Michael; Dellal, George; Peterson, Laura E; Provost, Lloyd; Gloor, Peter A; Fore, David Livingstone; Margolis, Peter A | JMIR human factors. | 2018 Feb 22; | 29472173 | |
| OligoMiner provides a rapid, flexible environment for the design of genome-scale oligonucleotide in situ hybridization probes. | Beliveau, Brian J; Kishi, Jocelyn Y; Nir, Guy; Sasaki, Hiroshi M; Saka, Sinem K; Nguyen, Son C; Wu, Chao-Ting; Yin, Peng | Proceedings of the National Academy of Sciences of the United States of America. | 2018 Mar 06; | 29463736 | |
| 2'-O-methylation in mRNA disrupts tRNA decoding during translation elongation. | Choi, Junhong; Indrisiunaite, Gabriele; DeMirci, Hasan; Ieong, Ka-Weng; Wang, Jinfan; Petrov, Alexey; Prabhakar, Arjun; Rechavi, Gideon; Dominissini, Dan; He, Chuan; Ehrenberg, Måns; Puglisi, Joseph D | Nature structural & molecular biology. | 2018 03; | 29459784 | |
| Who Resembles a Scientific Leader-Jack or Jill? How Implicit Bias Could Influence Research Grant Funding. | Kolehmainen, Christine; Carnes, Molly | Circulation. | 2018 Feb 20; | 29459461 | |
| Rescue of Fragile X Syndrome Neurons by DNA Methylation Editing of the FMR1 Gene. | Liu, X Shawn; Wu, Hao; Krzisch, Marine; Wu, Xuebing; Graef, John; Muffat, Julien; Hnisz, Denes; Li, Charles H; Yuan, Bingbing; Xu, Chuanyun; Li, Yun; Vershkov, Dan; Cacace, Angela; Young, Richard A; Jaenisch, Rudolf | Cell. | 2018 02 22; | 29456084 | |
| Neural Population Dynamics Underlying Motor Learning Transfer. | Vyas, Saurabh; Even-Chen, Nir; Stavisky, Sergey D; Ryu, Stephen I; Nuyujukian, Paul; Shenoy, Krishna V | Neuron. | 2018 03 07; | 29456026 | |
| Pathogen-Specific Bacterial Imaging in Nuclear Medicine. | Ordonez, Alvaro A; Jain, Sanjay K | Seminars in nuclear medicine. | 2018 Mar; | 29452620 | |
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| Label-free cell nuclear imaging by Grüneisen relaxation photoacoustic microscopy. | Liu, Xiaowei; Wong, Terence T W; Shi, Junhui; Ma, Jun; Yang, Qing; Wang, Lihong V | Optics letters. | 2018 Feb 15; | 29444034 | |
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| Exogenous lipid uptake induces metabolic and functional reprogramming of tumor-associated myeloid-derived suppressor cells. | Al-Khami, Amir A; Zheng, Liqin; Del Valle, Luis; Hossain, Fokhrul; Wyczechowska, Dorota; Zabaleta, Jovanny; Sanchez, Maria D; Dean, Matthew J; Rodriguez, Paulo C; Ochoa, Augusto C | Oncoimmunology. | 2017; | 29123954 | |
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| Cyclotides, a versatile ultrastable micro-protein scaffold for biotechnological applications. | Camarero, Julio A | Bioorganic & medicinal chemistry letters. | 2017 12 01; | 29110985 | |
| Smad3 initiates oxidative stress and proteolysis that underlies diaphragm dysfunction during mechanical ventilation. | Tang, Huibin; L Kennedy, Catherine; Lee, Myung; Gao, Yang; Xia, Hui; Olguin, Francesca; Fraga, Danielle A; Ayers, Kelsey; Choi, Sehoon; Kim, Michael; Tehrani, Amir; Sowb, Yasser A; Rando, Thomas A; Shrager, Joseph B | Scientific reports. | 2017 Nov 06; | 29109401 | |
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| Circulating microRNAs and treatment response in the Phase II SWOG S0925 study for patients with new metastatic hormone-sensitive prostate cancer. | Cheng, Heather H; Plets, Melissa; Li, Hongli; Higano, Celestia S; Tangen, Catherine M; Agarwal, Neeraj; Vogelzang, Nicholas J; Hussain, Maha; Thompson Jr, Ian M; Tewari, Muneesh; Yu, Evan Y | The Prostate. | 2018 Feb; | 29105802 | |
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| Abundant off-target edits from site-directed RNA editing can be reduced by nuclear localization of the editing enzyme. | Vallecillo-Viejo, Isabel C; Liscovitch-Brauer, Noa; Montiel-Gonzalez, Maria Fernanda; Eisenberg, Eli; Rosenthal, Joshua J C | RNA biology. | 2018 01 02; | 29099293 | |
| Enzyme-Targeted Nanoparticles for Delivery to Ischemic Skeletal Muscle. | Ungerleider, J L; Kammeyer, J K; Braden, R L; Christman, K L; Gianneschi, N C | Polymer chemistry. | 2017 Sep 14; | 29098018 | |
| Nonsteroidal Anti-Inflammatory Drug-Induced Leaky Gut Modeled Using Polarized Monolayers of Primary Human Intestinal Epithelial Cells. | Bhatt, Aadra P; Gunasekara, Dulan B; Speer, Jennifer; Reed, Mark I; Peña, Alexis N; Midkiff, Bentley R; Magness, Scott T; Bultman, Scott J; Allbritton, Nancy L; Redinbo, Matthew R | ACS infectious diseases. | 2017 Nov 10; | 29094594 | |
| Single-Cell RNA-Seq Analysis of Infiltrating Neoplastic Cells at the Migrating Front of Human Glioblastoma. | Darmanis, Spyros; Sloan, Steven A; Croote, Derek; Mignardi, Marco; Chernikova, Sophia; Samghababi, Peyman; Zhang, Ye; Neff, Norma; Kowarsky, Mark; Caneda, Christine; Li, Gordon; Chang, Steven D; Connolly, Ian David; Li, Yingmei; Barres, Ben A; Gephart, Me | Cell reports. | 2017 10 31; | 29091775 | |
| Risk of Clostridium difficile Infection in Patients With Celiac Disease: A Population-Based Study. | Lebwohl, Benjamin; Nobel, Yael R; Green, Peter H R; Blaser, Martin J; Ludvigsson, Jonas F | The American journal of gastroenterology. | 2017 Dec; | 29087398 | |
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| High-Affinity Nucleic-Acid-Based Receptors for Steroids. | Yang, Kyung-Ae; Chun, Hyosun; Zhang, Yameng; Pecic, Stevan; Nakatsuka, Nako; Andrews, Anne M; Worgall, Tilla S; Stojanovic, Milan N | ACS chemical biology. | 2017 12 15; | 29083858 | |
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| Age and the association of dementia-related pathology with trajectories of cognitive decline. | Jansen, Willemijn J; Wilson, Robert S; Visser, Pieter Jelle; Nag, Sukriti; Schneider, Julie A; James, Bryan D; Leurgans, Sue E; Capuano, Ana W; Bennett, David A; Boyle, Patricia A | Neurobiology of aging. | 2018 01; | 29078129 | |
| Inhibition of DAI-dependent necroptosis by the Z-DNA binding domain of the vaccinia virus innate immune evasion protein, E3. | Koehler, Heather; Cotsmire, Samantha; Langland, Jeffrey; Kibler, Karen V; Kalman, Daniel; Upton, Jason W; Mocarski, Edward S; Jacobs, Bertram L | Proceedings of the National Academy of Sciences of the United States of America. | 2017 Oct 24; | 29073079 | |
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| Selective Proteomic Analysis of Antibiotic-Tolerant Cellular Subpopulations in Pseudomonas aeruginosa Biofilms. | Babin, Brett M; Atangcho, Lydia; van Eldijk, Mark B; Sweredoski, Michael J; Moradian, Annie; Hess, Sonja; Tolker-Nielsen, Tim; Newman, Dianne K; Tirrell, David A | mBio. | 2017 Oct 24; | 29066549 | |
| Expansion Mini-Microscopy: An Enabling Alternative in Point-of-Care Diagnostics. | Zhang, Yu Shrike; Santiago, Grissel Trujillo-de; Alvarez, Mario Moisés; Schiff, Steven J; Boyden, Edward S; Khademhosseini, Ali | Current opinion in biomedical engineering. | 2017 Mar; | 29062977 | |
| Design, implementation, and evaluation of a physiological closed-loop control device for medically-induced coma. | Jingzhi An; Purdon, Patrick L; Solt, Ken; Sims, Nathaniel M; Brown, Emery N; Westover, M Brandon | Conference proceedings : ... Annual International Conference of the IEEE Engineering in Medicine and Biology Society. IEEE Engineering in Medicine and Biology Society. Annual Conference. | 2017 07; | 29060851 | |
| MotifMark: Finding regulatory motifs in DNA sequences. | Hassanzadeh, Hamid Reza; Kolhe, Pushkar; Isbell, Charles L; Wang, May D | Conference proceedings : ... Annual International Conference of the IEEE Engineering in Medicine and Biology Society. IEEE Engineering in Medicine and Biology Society. Annual Conference. | 2017 07; | 29060747 | |
| Endothelial jagged-2 sustains hematopoietic stem and progenitor reconstitution after myelosuppression. | Guo, Peipei; Poulos, Michael G; Palikuqi, Brisa; Badwe, Chaitanya R; Lis, Raphael; Kunar, Balvir; Ding, Bi-Sen; Rabbany, Sina Y; Shido, Koji; Butler, Jason M; Rafii, Shahin | The Journal of clinical investigation. | 2017 Dec 01; | 29058691 | |
| Designing Acellular Injectable Biomaterial Therapeutics for Treating Myocardial Infarction and Peripheral Artery Disease. | Hernandez, Melissa J; Christman, Karen L | JACC. Basic to translational science. | 2017 Apr; | 29057375 | |
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| Embryonic stem cell secreted factors decrease invasiveness of triple-negative breast cancer cells through regulome modulation. | Tarasewicz, Elizabeth; Oakes, Robert S; Aviles, Misael O; Straehla, Joelle; Chilton, Kathryn M; Decker, Joseph T; Wu, Jia; Shea, Lonnie D; Jeruss, Jacqueline S | Cancer biology & therapy. | 2018 04 03; | 29053396 | |
| Antibodies to biotin enable large-scale detection of biotinylation sites on proteins. | Udeshi, Namrata D; Pedram, Kayvon; Svinkina, Tanya; Fereshetian, Shaunt; Myers, Samuel A; Aygun, Ozan; Krug, Karsten; Clauser, Karl; Ryan, Dominic; Ast, Tslil; Mootha, Vamsi K; Ting, Alice Y; Carr, Steven A | Nature methods. | 2017 Dec; | 29039416 | |
| Household triclosan and triclocarban effects on the infant and maternal microbiome. | Ribado, Jessica V; Ley, Catherine; Haggerty, Thomas D; Tkachenko, Ekaterina; Bhatt, Ami S; Parsonnet, Julie | EMBO molecular medicine. | 2017 12; | 29030459 | |
| Variant surface glycoprotein density defines an immune evasion threshold for African trypanosomes undergoing antigenic variation. | Pinger, Jason; Chowdhury, Shanin; Papavasiliou, F Nina | Nature communications. | 2017 10 10; | 29018220 | |
| Near-Infrared Fluorescent Proteins Engineered from Bacterial Phytochromes in Neuroimaging. | Piatkevich, Kiryl D; Suk, Ho-Jun; Kodandaramaiah, Suhasa B; Yoshida, Fumiaki; DeGennaro, Ellen M; Drobizhev, Mikhail; Hughes, Thomas E; Desimone, Robert; Boyden, Edward S; Verkhusha, Vladislav V | Biophysical journal. | 2017 Nov 21; | 29017728 | |
| Subcellular Fractionation for ERK Activation Upon Mitochondrial-derived Peptide Treatment. | Kim, Su-Jeong; Xiao, Jialin; Cohen, Pinchas; Yen, Kelvin | Journal of visualized experiments : JoVE. | 2017 09 25; | 28994791 | |
| Engineering the pre-metastatic niche. | Aguado, Brian A; Bushnell, Grace G; Rao, Shreyas S; Jeruss, Jacqueline S; Shea, Lonnie D | Nature biomedical engineering. | 2017; | 28989814 | |
| Cryo-EM Structures Reveal Mechanism and Inhibition of DNA Targeting by a CRISPR-Cas Surveillance Complex. | Guo, Tai Wei; Bartesaghi, Alberto; Yang, Hui; Falconieri, Veronica; Rao, Prashant; Merk, Alan; Eng, Edward T; Raczkowski, Ashleigh M; Fox, Tara; Earl, Lesley A; Patel, Dinshaw J; Subramaniam, Sriram | Cell. | 2017 Oct 05; | 28985564 | |
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| Safety and Immunogenicity of an Anti-Zika Virus DNA Vaccine - Preliminary Report. | Tebas, Pablo; Roberts, Christine C; Muthumani, Kar; Reuschel, Emma L; Kudchodkar, Sagar B; Zaidi, Faraz I; White, Scott; Khan, Amir S; Racine, Trina; Choi, Hyeree; Boyer, Jean; Park, Young K; Trottier, Sylvie; Remigio, Celine; Krieger, Diane; Spruill, Susan E; Bagarazzi, Mark; Kobinger, Gary P; Weiner, David B; Maslow, Joel N | The New England journal of medicine. | 2017 Oct 04; | 28976850 | |
| Ultrafast Synthesis of Multifunctional Submicrometer Hollow Silica Spheres in Microfluidic Spiral Channels. | Nie, Yuan; Hao, Nanjing; Zhang, John X J | Scientific reports. | 2017 Oct 03; | 28974729 | |
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| Small molecule inhibition of cGAS reduces interferon expression in primary macrophages from autoimmune mice. | Vincent, Jessica; Adura, Carolina; Gao, Pu; Luz, Antonio; Lama, Lodoe; Asano, Yasutomi; Okamoto, Rei; Imaeda, Toshihiro; Aida, Jumpei; Rothamel, Katherine; Gogakos, Tasos; Steinberg, Joshua; Reasoner, Seth; Aso, Kazuyoshi; Tuschl, Thomas; Patel, Dinshaw J; Glickman, J Fraser; Ascano, Manuel | Nature communications. | 2017 Sep 29; | 28963528 | |
| 3D reconstruction and standardization of the rat facial nucleus for precise mapping of vibrissal motor networks. | Guest, Jason M; Seetharama, Mythreya M; Wendel, Elizabeth S; Strick, Peter L; Oberlaender, Marcel | Neuroscience | 2018 Jan 01 | 28958919 | |
| Rapid intraoperative histology of unprocessed surgical specimens via fibre-laser-based stimulated Raman scattering microscopy. | Orringer, Daniel A; Pandian, Balaji; Niknafs, Yashar S; Hollon, Todd C; Boyle, Julianne; Lewis, Spencer; Garrard, Mia; Hervey-Jumper, Shawn L; Garton, Hugh J L; Maher, Cormac O; Heth, Jason A; Sagher, Oren; Wilkinson, D Andrew; Snuderl, Matija; Venneti, Sriram; Ramkissoon, Shakti H; McFadden, Kathryn A; Fisher-Hubbard, Amanda; Lieberman, Andrew P; Johnson, Timothy D; Xie, X Sunney; Trautman, Jay K; Freudiger, Christian W; Camelo-Piragua, Sandra | Nature biomedical engineering. | 2017; | 28955599 | |
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| Imaging RNA polymerase III transcription using a photostable RNA-fluorophore complex. | Song, Wenjiao; Filonov, Grigory S; Kim, Hyaeyeong; Hirsch, Markus; Li, Xing; Moon, Jared D; Jaffrey, Samie R | Nature chemical biology. | 2017 Nov; | 28945233 | |
| Clinically resolved psoriatic lesions contain psoriasis-specific IL-17-producing ?? T cell clones. | Matos, Tiago R; O'Malley, John T; Lowry, Elizabeth L; Hamm, David; Kirsch, Ilan R; Robins, Harlan S; Kupper, Thomas S; Krueger, James G; Clark, Rachael A | The Journal of clinical investigation. | 2017 Nov 01; | 28945199 | |
| Multiplexed Exchange-PAINT imaging reveals ligand-dependent EGFR and Met interactions in the plasma membrane. | Werbin, Jeffrey L; Avendaño, Maier S; Becker, Verena; Jungmann, Ralf; Yin, Peng; Danuser, Gaudenz; Sorger, Peter K | Scientific reports. | 2017 Sep 22; | 28939861 | |
| Triclosan and triclocarban exposure and thyroid function during pregnancy-A randomized intervention. | Ley, Catherine; Pischel, Lauren; Parsonnet, Julie | Reproductive toxicology (Elmsford, N.Y.). | 2017 12; | 28939492 | |
| Analysis of Hepatitis C Virus Particle Heterogeneity in Immunodeficient Human Liver Chimeric fah-/- Mice. | Andreo, Ursula; de Jong, Ype P; Scull, Margaret A; Xiao, Jing W; Vercauteren, Koen; Quirk, Corrine; Mommersteeg, Michiel C; Bergaya, Sonia; Menon, Arjun; Fisher, Edward A; Rice, Charles M | Cellular and molecular gastroenterology and hepatology. | 2017 Nov; | 28936471 | |
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| Total-Body PET: Maximizing Sensitivity to Create New Opportunities for Clinical Research and Patient Care. | Cherry, Simon R; Jones, Terry; Karp, Joel S; Qi, Jinyi; Moses, William W; Badawi, Ramsey D | Journal of nuclear medicine : official publication, Society of Nuclear Medicine. | 2018 Jan; | 28935835 | |
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| Susceptibility of Human Endogenous Retrovirus Type K to Reverse Transcriptase Inhibitors. | Contreras-Galindo, Rafael; Dube, Derek; Fujinaga, Koh; Kaplan, Mark H; Markovitz, David M | Journal of virology. | 2017 12 01; | 28931682 | |
| The TREM2-APOE Pathway Drives the Transcriptional Phenotype of Dysfunctional Microglia in Neurodegenerative Diseases. | Krasemann, Susanne; Madore, Charlotte; Cialic, Ron; Baufeld, Caroline; Calcagno, Narghes; El Fatimy, Rachid; Beckers, Lien; O'Loughlin, Elaine; Xu, Yang; Fanek, Zain; Greco, David J; Smith, Scott T; Tweet, George; Humulock, Zachary; Zrzavy, Tobias; Conde-Sanroman, Patricia; Gacias, Mar; Weng, Zhiping; Chen, Hao; Tjon, Emily; Mazaheri, Fargol; Hartmann, Kristin; Madi, Asaf; Ulrich, Jason D; Glatzel, Markus; Worthmann, Anna; Heeren, Joerg; Budnik, Bogdan; Lemere, Cynthia; Ikezu, Tsuneya; Heppner, Frank L; Litvak, Vladimir; Holtzman, David M; Lassmann, Hans; Weiner, Howard L; Ochando, Jordi; Haass, Christian; Butovsky, Oleg | Immunity. | 2017 Sep 19; | 28930663 | |
| Substituting Sodium Hydrosulfite with Sodium Metabisulfite Improves Long-Term Stability of a Distributable Paper-Based Test Kit for Point-of-Care Screening for Sickle Cell Anemia. | Torabian, Kian; Lezzar, Dalia; Piety, Nathaniel Z; George, Alex; Shevkoplyas, Sergey S | Biosensors. | 2017 Sep 20; | 28930183 | |
| Bayesian Unidimensional Scaling for visualizing uncertainty in high dimensional datasets with latent ordering of observations. | Nguyen, Lan Huong; Holmes, Susan | BMC bioinformatics. | 2017 Sep 13; | 28929970 | |
| In-cell production of a genetically-encoded library based on the ?-defensin RTD-1 using a bacterial expression system. | Bi, Tao; Li, Yilong; Shekhtman, Alexander; Camarero, Julio A | Bioorganic & medicinal chemistry. | 2018 03 15; | 28927803 | |
| In Situ Super-Resolution Imaging of Genomic DNA with OligoSTORM and OligoDNA-PAINT. | Beliveau, Brian J; Boettiger, Alistair N; Nir, Guy; Bintu, Bogdan; Yin, Peng; Zhuang, Xiaowei; Wu, C-Ting | Methods in molecular biology (Clifton, N.J.). | ; | 28924672 | |
| An in vitro model of lissencephaly: expanding the role of DCX during neurogenesis. | Shahsavani, M; Pronk, R J; Falk, R; Lam, M; Moslem, M; Linker, S B; Salma, J; Day, K; Schuster, J; Anderlid, B-M; Dahl, N; Gage, F H; Falk, A | Molecular psychiatry. | 2018 07; | 28924182 | |
| Nup153 Interacts with Sox2 to Enable Bimodal Gene Regulation and Maintenance of Neural Progenitor Cells. | Toda, Tomohisa; Hsu, Jonathan Y; Linker, Sara B; Hu, Lauren; Schafer, Simon T; Mertens, Jerome; Jacinto, Filipe V; Hetzer, Martin W; Gage, Fred H | Cell stem cell. | 2017 Nov 02; | 28919367 | |
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| cTag-PAPERCLIP Reveals Alternative Polyadenylation Promotes Cell-Type Specific Protein Diversity and Shifts Araf Isoforms with Microglia Activation. | Hwang, Hun-Way; Saito, Yuhki; Park, Christopher Y; Blachère, Nathalie E; Tajima, Yoko; Fak, John J; Zucker-Scharff, Ilana; Darnell, Robert B | Neuron. | 2017 Sep 13; | 28910620 | |
| Rabies screen reveals GPe control of cocaine-triggered plasticity. | Beier, Kevin T; Kim, Christina K; Hoerbelt, Paul; Hung, Lin Wai; Heifets, Boris D; DeLoach, Katherine E; Mosca, Timothy J; Neuner, Sophie; Deisseroth, Karl; Luo, Liqun; Malenka, Robert C | Nature. | 2017 09 21; | 28902833 | |
| A single early-in-life macrolide course has lasting effects on murine microbial network topology and immunity. | Ruiz, Victoria E; Battaglia, Thomas; Kurtz, Zachary D; Bijnens, Luc; Ou, Amy; Engstrand, Isak; Zheng, Xuhui; Iizumi, Tadasu; Mullins, Briana J; Müller, Christian L; Cadwell, Ken; Bonneau, Richard; Perez-Perez, Guillermo I; Blaser, Martin J | Nature communications. | 2017 09 11; | 28894149 | |
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| TCR-pMHC encounter differentially regulates transcriptomes of tissue-resident CD8 T cells. | Yoshizawa, Akihiro; Bi, Kevin; Keskin, Derin B; Zhang, Guanglan; Reinhold, Bruce; Reinherz, Ellis L | European journal of immunology. | 2018 01; | 28872670 | |
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| Closed-Loop Real-Time Imaging Enables Fully Automated Cell-Targeted Patch-Clamp Neural Recording In Vivo. | Suk, Ho-Jun; van Welie, Ingrid; Kodandaramaiah, Suhasa B; Allen, Brian; Forest, Craig R; Boyden, Edward S | Neuron. | 2017 Aug 30; | 28858614 | |
| GUIDES: sgRNA design for loss-of-function screens. | Meier, Joshua A; Zhang, Feng; Sanjana, Neville E | Nature methods. | 2017 Aug 31; | 28858339 | |
| Nucleolar expansion and elevated protein translation in premature aging. | Buchwalter, Abigail; Hetzer, Martin W | Nature communications. | 2017 08 30; | 28855503 | |
| A multi-trap microfluidic chip enabling longitudinal studies of nerve regeneration in Caenorhabditis elegans. | Gokce, Sertan Kutal; Hegarty, Evan Marley; Mondal, Sudip; Zhao, Peisen; Ghorashian, Navid; Hilliard, Massimo A; Ben-Yakar, Adela | Scientific reports. | 2017 08 29; | 28852096 | |
| Investment in secreted enzymes during nutrient-limited growth is utility dependent. | Cezairliyan, Brent; Ausubel, Frederick M | Proceedings of the National Academy of Sciences of the United States of America. | 2017 09 12; | 28847943 | |
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| Glia initiate brain assembly through noncanonical Chimaerin-Furin axon guidance in C. elegans. | Rapti, Georgia; Li, Chang; Shan, Alan; Lu, Yun; Shaham, Shai | Nature neuroscience. | 2017 Oct; | 28846083 | |
| Successful cure of extensively drug-resistant pulmonary tuberculosis in a young child. | Salazar-Austin, Nicole; Akinboyo, Ibukunoluwa; Jain, Sanjay K | The Lancet. Infectious diseases. | 2017 Sep; | 28845790 | |
| Oxalobacter formigenes-associated host features and microbial community structures examined using the American Gut Project. | Liu, Menghan; Koh, Hyunwook; Kurtz, Zachary D; Battaglia, Thomas; PeBenito, Amanda; Li, Huilin; Nazzal, Lama; Blaser, Martin J | Microbiome. | 2017 Aug 25; | 28841836 | |
| Seasonal cycling in the gut microbiome of the Hadza hunter-gatherers of Tanzania. | Smits, Samuel A; Leach, Jeff; Sonnenburg, Erica D; Gonzalez, Carlos G; Lichtman, Joshua S; Reid, Gregor; Knight, Rob; Manjurano, Alphaxard; Changalucha, John; Elias, Joshua E; Dominguez-Bello, Maria Gloria; Sonnenburg, Justin L | Science (New York, N.Y.). | 2017 08 25; | 28839072 | |
| Green fluorescent genetically encoded calcium indicator based on calmodulin/M13-peptide from fungi. | Barykina, Natalia V; Subach, Oksana M; Piatkevich, Kiryl D; Jung, Erica E; Malyshev, Aleksey Y; Smirnov, Ivan V; Bogorodskiy, Andrey O; Borshchevskiy, Valentin I; Varizhuk, Anna M; Pozmogova, Galina E; Boyden, Edward S; Anokhin, Konstantin V; Enikolopov, Grigori N; Subach, Fedor V | PloS one. | 2017; | 28837632 | |
| Alloimmune Responses of Humanized Mice to Human Pluripotent Stem Cell Therapeutics. | Kooreman, Nigel G; de Almeida, Patricia E; Stack, Jonathan P; Nelakanti, Raman V; Diecke, Sebastian; Shao, Ning-Yi; Swijnenburg, Rutger-Jan; Sanchez-Freire, Veronica; Matsa, Elena; Liu, Chun; Connolly, Andrew J; Hamming, Jaap F; Quax, Paul H A; Brehm, Michael A; Greiner, Dale L; Shultz, Leonard D; Wu, Joseph C | Cell reports. | 2017 Aug 22; | 28834758 | |
| Constitutive Signaling from an Engineered IL7 Receptor Promotes Durable Tumor Elimination by Tumor-Redirected T Cells. | Shum, Thomas; Omer, Bilal; Tashiro, Haruko; Kruse, Robert L; Wagner, Dimitrios L; Parikh, Kathan; Yi, Zhongzhen; Sauer, Tim; Liu, Daofeng; Parihar, Robin; Castillo, Paul; Liu, Hao; Brenner, Malcolm K; Metelitsa, Leonid S; Gottschalk, Stephen; Rooney, Cliona M | Cancer discovery. | 2017 11; | 28830878 | |
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| Human Astrocyte Maturation Captured in 3D Cerebral Cortical Spheroids Derived from Pluripotent Stem Cells. | Sloan, Steven A; Darmanis, Spyros; Huber, Nina; Khan, Themasap A; Birey, Fikri; Caneda, Christine; Reimer, Richard; Quake, Stephen R; Barres, Ben A; Pa?ca, Sergiu P | Neuron. | 2017 Aug 16; | 28817799 | |
| (1)H-Detected REDOR with Fast Magic-Angle Spinning of a Deuterated Protein. | Ghosh, Manali; Rienstra, Chad M | The journal of physical chemistry. B. | 2017 Sep 14; | 28816462 | |
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| MicroRNA-9 Couples Brain Neurogenesis and Angiogenesis. | Madelaine, Romain; Sloan, Steven A; Huber, Nina; Notwell, James H; Leung, Louis C; Skariah, Gemini; Halluin, Caroline; Pa?ca, Sergiu P; Bejerano, Gill; Krasnow, Mark A; Barres, Ben A; Mourrain, Philippe | Cell reports. | 2017 Aug 15; | 28813666 | |
| AAV-mediated direct in vivo CRISPR screen identifies functional suppressors in glioblastoma. | Chow, Ryan D; Guzman, Christopher D; Wang, Guangchuan; Schmidt, Florian; Youngblood, Mark W; Ye, Lupeng; Errami, Youssef; Dong, Matthew B; Martinez, Michael A; Zhang, Sensen; Renauer, Paul; Bilguvar, Kaya; Gunel, Murat; Sharp, Phillip A; Zhang, Feng; Platt, Randall J; Chen, Sidi | Nature neuroscience. | 2017 Oct; | 28805815 | |
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| Inducible Activation of MyD88 and CD40 in CAR T Cells Results in Controllable and Potent Antitumor Activity in Preclinical Solid Tumor Models. | Mata, Melinda; Gerken, Claudia; Nguyen, Phuong; Krenciute, Giedre; Spencer, David M; Gottschalk, Stephen | Cancer discovery. | 2017 11; | 28801306 | |
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| Blimp1 induces transient metastatic heterogeneity in pancreatic cancer. | Chiou, Shin-Heng; Risca, Viviana I; Wang, Gordon X; Yang, Dian; Grüner, Barbara M; Kathiria, Arwa S; Ma, Rosanna K; Vaka, Dedeepya; Chu, Pauline; Kozak, Margaret; Castellini, Laura; Graves, Edward E; Kim, Grace E; Mourrain, Philippe; Koong, Albert C; Giaccia, Amato J; Winslow, Monte M | Cancer discovery. | 2017 Aug 08; | 28790031 | |
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| Structural Basis for the Canonical and Non-canonical PAM Recognition by CRISPR-Cpf1. | Yamano, Takashi; Zetsche, Bernd; Ishitani, Ryuichiro; Zhang, Feng; Nishimasu, Hiroshi; Nureki, Osamu | Molecular cell. | 2017 Aug 17; | 28781234 | |
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| Implementation of HPV vaccination guidelines in a diverse population in Los Angeles: Results from an environmental scan of local HPV resources and needs. | Baezconde-Garbanati, Lourdes; Lienemann, Brianna A; Robles, Marisela; Johnson, Ethel; Sanchez, Kathleen; Singhal, Rita; Steinberg, Jane; Jaque, Jenny M; Pentz, Mary Ann; Gruber, Stephen | Vaccine. | 2017 09 05; | 28774559 | |
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| A Genetic Variant Associated with Five Vascular Diseases Is a Distal Regulator of Endothelin-1 Gene Expression. | Gupta, Rajat M; Hadaya, Joseph; Trehan, Aditi; Zekavat, Seyedeh M; Roselli, Carolina; Klarin, Derek; Emdin, Connor A; Hilvering, Catharina R E; Bianchi, Valerio; Mueller, Christian; Khera, Amit V; Ryan, Russell J H; Engreitz, Jesse M; Issner, Robbyn; Shoresh, Noam; Epstein, Charles B; de Laat, Wouter; Brown, Jonathan D; Schnabel, Renate B; Bernstein, Bradley E; Kathiresan, Sekar | Cell. | 2017 Jul 27; | 28753427 | |
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| Thalamocortical synchronization during induction and emergence from propofol-induced unconsciousness. | Flores, Francisco J; Hartnack, Katharine E; Fath, Amanda B; Kim, Seong-Eun; Wilson, Matthew A; Brown, Emery N; Purdon, Patrick L | Proceedings of the National Academy of Sciences of the United States of America. | 2017 Aug 08; | 28743752 | |
| Argonaute CLIP Defines a Deregulated miR-122-Bound Transcriptome that Correlates with Patient Survival in Human Liver Cancer. | Luna, Joseph M; Barajas, Juan M; Teng, Kun-Yu; Sun, Hui-Lung; Moore, Michael J; Rice, Charles M; Darnell, Robert B; Ghoshal, Kalpana | Molecular cell. | 2017 Aug 03; | 28735896 | |
| Tuning the Cavity Size and Chirality of Self-Assembling 3D DNA Crystals. | Simmons, Chad R; Zhang, Fei; MacCulloch, Tara; Fahmi, Noureddine; Stephanopoulos, Nicholas; Liu, Yan; Seeman, Nadrian C; Yan, Hao | Journal of the American Chemical Society. | ; | 28731332 | |
| Decitabine Priming Enhances Mucin 1 Inhibition Mediated Disruption of Redox Homeostasis in Cutaneous T-Cell Lymphoma. | Jain, Salvia; Washington, Abigail; Leaf, Rebecca Karp; Bhargava, Parul; Clark, Rachael A; Kupper, Thomas S; Stroopinsky, Dina; Pyzer, Athalia; Cole, Leandra; Nahas, Myrna; Apel, Arie; Rosenblatt, Jacalyn; Arnason, Jon; Kufe, Donald; Avigan, David | Molecular cancer therapeutics. | 2017 Oct; | 28729399 | |
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| Sevoflurane Induces Coherent Slow-Delta Oscillations in Rats. | Guidera, Jennifer A; Taylor, Norman E; Lee, Justin T; Vlasov, Ksenia Y; Pei, JunZhu; Stephen, Emily P; Mayo, J Patrick; Brown, Emery N; Solt, Ken | Frontiers in neural circuits. | 2017; | 28725184 | |
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| Cerebellins are differentially expressed in selective subsets of neurons throughout the brain. | Seigneur, Erica; Südhof, Thomas C | The Journal of comparative neurology. | 2017 Oct 15; | 28714144 | |
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| Detection of an Integrin-Binding Mechanoswitch within Fibronectin during Tissue Formation and Fibrosis. | Cao, Lizhi; Nicosia, John; Larouche, Jacqueline; Zhang, Yuanyuan; Bachman, Haylee; Brown, Ashley C; Holmgren, Lars; Barker, Thomas H | ACS nano. | 2017 Jul 25; | 28699736 | |
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| Sub-100-nm metafluorophores with digitally tunable optical properties self-assembled from DNA. | Woehrstein, Johannes B; Strauss, Maximilian T; Ong, Luvena L; Wei, Bryan; Zhang, David Y; Jungmann, Ralf; Yin, Peng | Science advances. | 2017 Jun; | 28691083 | |
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| Deconstruction of the Ras switching cycle through saturation mutagenesis. | Bandaru, Pradeep; Shah, Neel H; Bhattacharyya, Moitrayee; Barton, John P; Kondo, Yasushi; Cofsky, Joshua C; Gee, Christine L; Chakraborty, Arup K; Kortemme, Tanja; Ranganathan, Rama; Kuriyan, John | eLife | 2017 Jul 07 | 28686159 | |
| Washing in hypotonic saline reduces the fraction of irreversibly-damaged cells in stored blood: a proof-of-concept study. | Xia, Hui; Khanal, Grishma; Strachan, Briony C; Vörös, Eszter; Piety, Nathaniel Z; Gifford, Sean C; Shevkoplyas, Sergey S | Blood transfusion = Trasfusione del sangue. | 2017 Sep; | 28686152 | |
| Tissue-Integrating Oxygen Sensors: Continuous Tracking of Tissue Hypoxia. | Wisniewski, Natalie A; Nichols, Scott P; Gamsey, Soya J; Pullins, Steve; Au-Yeung, Kit Y; Klitzman, Bruce; Helton, Kristen L | Advances in experimental medicine and biology. | 2017; | 28685468 | |
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| Post-termination Ribosome Intermediate Acts as the Gateway to Ribosome Recycling. | Prabhakar, Arjun; Capece, Mark C; Petrov, Alexey; Choi, Junhong; Puglisi, Joseph D | Cell reports. | 2017 Jul 05; | 28683310 | |
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| Sex-dependent Differences in Liver and Gut Metabolomic Profiles With Acarbose and Calorie Restriction in C57BL/6 Mice. | Gibbs, Victoria K; Brewer, Rachel A; Miyasaki, Nathan D; Patki, Amit; Smith Jr, Daniel L | The journals of gerontology. Series A, Biological sciences and medical sciences. | 2018 01 16; | 28651373 | |
| Patients and primary care providers identify opportunities for personalized (N-of-1) trials in the mobile health era. | Kronish, Ian M; Alcántara, Carmela; Duer-Hefele, Joan; St Onge, Tara; Davidson, Karina W; Carter, Eileen J; Medina, Vivian; Cohn, Elizabeth; Moise, Nathalie | Journal of clinical epidemiology. | 2017 Sep; | 28648833 | |
| Enhanced in vivo retention of low dose BMP-2 via heparin microparticle delivery does not accelerate bone healing in a critically sized femoral defect. | Hettiaratchi, Marian H; Rouse, Tel; Chou, Catherine; Krishnan, Laxminarayanan; Stevens, Hazel Y; Li, Mon-Tzu A; McDevitt, Todd C; Guldberg, Robert E | Acta biomaterialia. | 2017 09 01; | 28645809 | |
| m6A mRNA modifications are deposited in nascent pre-mRNA and are not required for splicing but do specify cytoplasmic turnover. | Ke, Shengdong; Pandya-Jones, Amy; Saito, Yuhki; Fak, John J; Vågbø, Cathrine Broberg; Geula, Shay; Hanna, Jacob H; Black, Douglas L; Darnell Jr, James E; Darnell, Robert B | Genes & development. | 2017 May 15; | 28637692 | |
| Protective Effect of Intravitreal Administration of Exosomes Derived from Mesenchymal Stem Cells on Retinal Ischemia. | Moisseiev, Elad; Anderson, Johnathon D; Oltjen, Sharon; Goswami, Mayank; Zawadzki, Robert J; Nolta, Jan A; Park, Susanna S | Current eye research. | 2017 10; | 28636406 | |
| High-resolution deep functional imaging of the whole mouse brain by photoacoustic computed tomography in?vivo. | Zhang, Pengfei; Li, Lei; Lin, Li; Hu, Peng; Shi, Junhui; He, Yun; Zhu, Liren; Zhou, Yong; Wang, Lihong V | Journal of biophotonics. | 2017 Jun 21; | 28635056 | |
| Bioengineered constructs combined with exercise enhance stem cell-mediated treatment of volumetric muscle loss. | Quarta, Marco; Cromie, Melinda; Chacon, Robert; Blonigan, Justin; Garcia, Victor; Akimenko, Igor; Hamer, Mark; Paine, Patrick; Stok, Merel; Shrager, Joseph B; Rando, Thomas A | Nature communications. | 2017 Jun 20; | 28631758 | |
| Adaptive optics improves multiphoton super-resolution imaging. | Zheng, Wei; Wu, Yicong; Winter, Peter; Fischer, Robert; Nogare, Damian Dalle; Hong, Amy; McCormick, Chad; Christensen, Ryan; Dempsey, William P; Arnold, Don B; Zimmerberg, Joshua; Chitnis, Ajay; Sellers, James; Waterman, Clare; Shroff, Hari | Nature methods. | 2017 Sep; | 28628128 | |
| A novel flexible cuff-like microelectrode for dual purpose, acute and chronic electrical interfacing with the mouse cervical vagus nerve. | Caravaca, A S; Tsaava, T; Goldman, L; Silverman, H; Riggott, G; Chavan, S S; Bouton, C; Tracey, K J; Desimone, R; Boyden, E S; Sohal, H S; Olofsson, P S | Journal of neural engineering. | 2017 12; | 28628030 | |
| Pharmacological Modulation of Noradrenergic Arousal Circuitry Disrupts Functional Connectivity of the Locus Ceruleus in Humans. | Song, Andrew H; Kucyi, Aaron; Napadow, Vitaly; Brown, Emery N; Loggia, Marco L; Akeju, Oluwaseun | The Journal of neuroscience : the official journal of the Society for Neuroscience. | 2017 Jul 19; | 28626012 | |
| Motor Cortical Visuomotor Feedback Activity Is Initially Isolated from Downstream Targets in Output-Null Neural State Space Dimensions. | Stavisky, Sergey D; Kao, Jonathan C; Ryu, Stephen I; Shenoy, Krishna V | Neuron. | 2017 Jul 05; | 28625485 | |
| Sensitivity to Sevoflurane anesthesia is decreased in mice with a congenital deletion of Guanylyl Cyclase-1 alpha. | Nagasaka, Yasuko; Wepler, Martin; Thoonen, Robrecht; Sips, Patrick Y; Allen, Kaitlin; Graw, Jan A; Yao, Vincent; Burns, Sara M; Muenster, Stefan; Brouckaert, Peter; Miller, Keith; Solt, Ken; Buys, Emmanuel S; Ichinose, Fumito; Zapol, Warren M | BMC anesthesiology. | 2017 Jun 14; | 28615047 | |
| Unique versus Redundant Functions of Neuroligin Genes in Shaping Excitatory and Inhibitory Synapse Properties. | Chanda, Soham; Hale, W Dylan; Zhang, Bo; Wernig, Marius; Südhof, Thomas C | The Journal of neuroscience : the official journal of the Society for Neuroscience. | 2017 Jul 19; | 28607166 | |
| Inhibition Mechanism of an Anti-CRISPR Suppressor AcrIIA4 Targeting SpyCas9. | Yang, Hui; Patel, Dinshaw J | Molecular cell. | 2017 Jul 06; | 28602637 | |
| Effects of primary and recurrent sacral chordoma on the motor and nociceptive function of hindlimbs in rats: an orthotopic spine model. | Sarabia-Estrada, Rachel; Ruiz-Valls, Alejandro; Shah, Sagar R; Ahmed, A Karim; Ordonez, Alvaro A; Rodriguez, Fausto J; Guerrero-Cazares, Hugo; Jimenez-Estrada, Ismael; Velarde, Esteban; Tyler, Betty; Li, Yuxin; Phillips, Neil A; Goodwin, C Rory; Petteys, | Journal of neurosurgery. Spine. | 2017 Aug; | 28598292 | |
| Structural Basis for the Altered PAM Recognition by Engineered CRISPR-Cpf1. | Nishimasu, Hiroshi; Yamano, Takashi; Gao, Linyi; Zhang, Feng; Ishitani, Ryuichiro; Nureki, Osamu | Molecular cell. | 2017 Jul 06; | 28595896 | |
| DNA vaccination protects mice against Zika virus-induced damage to the testes. | Griffin, Bryan D; Muthumani, Kar; Warner, Bryce M; Majer, Anna; Hagan, Mable; Audet, Jonathan; Stein, Derek R; Ranadheera, Charlene; Racine, Trina; De La Vega, Marc-Antoine; Piret, Jocelyne; Kucas, Stephanie; Tran, Kaylie N; Frost, Kathy L; De Graff, Christine; Soule, Geoff; Scharikow, Leanne; Scott, Jennifer; McTavish, Gordon; Smid, Valerie; Park, Young K; Maslow, Joel N; Sardesai, Niranjan Y; Kim, J Joseph; Yao, Xiao-Jian; Bello, Alexander; Lindsay, Robbin; Boivin, Guy; Booth, Stephanie A; Kobasa, Darwyn; Embury-Hyatt, Carissa; Safronetz, David; Weiner, David B; Kobinger, Gary P | Nature communications. | 2017 Jun 07; | 28589934 | |
| Engineered Cpf1 variants with altered PAM specificities. | Gao, Linyi; Cox, David B T; Yan, Winston X; Manteiga, John C; Schneider, Martin W; Yamano, Takashi; Nishimasu, Hiroshi; Nureki, Osamu; Crosetto, Nicola; Zhang, Feng | Nature biotechnology. | 2017 Jun 05; | 28581492 | |
| Noninvasive Deep Brain Stimulation via Temporally Interfering Electric Fields. | Grossman, Nir; Bono, David; Dedic, Nina; Kodandaramaiah, Suhasa B; Rudenko, Andrii; Suk, Ho-Jun; Cassara, Antonino M; Neufeld, Esra; Kuster, Niels; Tsai, Li-Huei; Pascual-Leone, Alvaro; Boyden, Edward S | Cell. | 2017 Jun 01; | 28575667 | |
| Characterization of interfacial socket pressure in transhumeral prostheses: A case series. | Schofield, Jonathon S; Schoepp, Katherine R; Williams, Heather E; Carey, Jason P; Marasco, Paul D; Hebert, Jacqueline S | PloS one. | 2017; | 28575012 | |
| Fast label-free multilayered histology-like imaging of human breast cancer by photoacoustic microscopy. | Wong, Terence T W; Zhang, Ruiying; Hai, Pengfei; Zhang, Chi; Pleitez, Miguel A; Aft, Rebecca L; Novack, Deborah V; Wang, Lihong V | Science advances. | 2017 May; | 28560329 | |
| Transgenic Expression of IL15 Improves Antiglioma Activity of IL13R?2-CAR T Cells but Results in Antigen Loss Variants. | Krenciute, Giedre; Prinzing, Brooke L; Yi, Zhongzhen; Wu, Meng-Fen; Liu, Hao; Dotti, Gianpietro; Balyasnikova, Irina V; Gottschalk, Stephen | Cancer immunology research. | 2017 Jul; | 28550091 | |
| Neural oscillations demonstrate that general anesthesia and sedative states are neurophysiologically distinct from sleep. | Akeju, Oluwaseun; Brown, Emery N | Current opinion in neurobiology. | 2017 06; | 28544930 | |
| Cyclotides: Overview and Biotechnological Applications. | Gould, Andrew; Camarero, Julio A | Chembiochem : a European journal of chemical biology. | 2017 07 18; | 28544675 | |
| The microRNA miR-31 inhibits CD8+ T cell function in chronic viral infection. | Moffett, Howell F; Cartwright, Adam N R; Kim, Hye-Jung; Godec, Jernej; Pyrdol, Jason; Äijö, Tarmo; Martinez, Gustavo J; Rao, Anjana; Lu, Jun; Golub, Todd R; Cantor, Harvey; Sharpe, Arlene H; Novina, Carl D; Wucherpfennig, Kai W | Nature immunology. | 2017 Jul; | 28530712 | |
| Energy metabolic pathways control the fate and function of myeloid immune cells. | Al-Khami, Amir A; Rodriguez, Paulo C; Ochoa, Augusto C | Journal of leukocyte biology. | 2017 Aug; | 28515225 | |
| Conversion of adult endothelium to immunocompetent haematopoietic stem cells. | Lis, Raphael; Karrasch, Charles C; Poulos, Michael G; Kunar, Balvir; Redmond, David; Duran, Jose G Barcia; Badwe, Chaitanya R; Schachterle, William; Ginsberg, Michael; Xiang, Jenny; Tabrizi, Arash Rafii; Shido, Koji; Rosenwaks, Zev; Elemento, Olivier; Spe | Nature. | 2017 05 25; | 28514438 | |
| Generation of pure GABAergic neurons by transcription factor programming. | Yang, Nan; Chanda, Soham; Marro, Samuele; Ng, Yi-Han; Janas, Justyna A; Haag, Daniel; Ang, Cheen Euong; Tang, Yunshuo; Flores, Quetzal; Mall, Moritz; Wapinski, Orly; Li, Mavis; Ahlenius, Henrik; Rubenstein, John L; Chang, Howard Y; Buylla, Arturo Alvarez; Südhof, Thomas C; Wernig, Marius | Nature methods. | 2017 Jun; | 28504679 | |
| BLISS is a versatile and quantitative method for genome-wide profiling of DNA double-strand breaks. | Yan, Winston X; Mirzazadeh, Reza; Garnerone, Silvano; Scott, David; Schneider, Martin W; Kallas, Tomasz; Custodio, Joaquin; Wernersson, Erik; Li, Yinqing; Gao, Linyi; Federova, Yana; Zetsche, Bernd; Zhang, Feng; Bienko, Magda; Crosetto, Nicola | Nature communications. | 2017 May 12; | 28497783 | |
| An miRNA Expression Signature for the Human Colonic Stem Cell Niche Distinguishes Malignant from Normal Epithelia. | Viswanathan, Vignesh; Damle, Shirish; Zhang, Tao; Opdenaker, Lynn; Modarai, Shirin; Accerbi, Monica; Schmidt, Skye; Green, Pamela; Galileo, Deni; Palazzo, Juan; Fields, Jeremy; Haghighat, Sepehr; Rigoutsos, Isidore; Gonye, Greg; Boman, Bruce M | Cancer research. | 2017 07 15; | 28487386 | |
| The role of the microbiome in cancer development and therapy. | Bhatt, Aadra P; Redinbo, Matthew R; Bultman, Scott J | CA: a cancer journal for clinicians. | 2017 May 08; | 28481406 | |
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| Description of two novel members of the family Erysipelotrichaceae: Ileibacterium valens gen. nov., sp. nov. and Dubosiella newyorkensis, gen. nov., sp. nov., from the murine intestine, and emendation to the description of Faecalibaculum rodentium. | Cox, Laura M; Sohn, Jiho; Tyrrell, Kerin L; Citron, Diane M; Lawson, Paul A; Patel, Nisha B; Iizumi, Tadasu; Perez-Perez, Guillermo I; Goldstein, Ellie J C; Blaser, Martin J | International journal of systematic and evolutionary microbiology. | 2017 05; | 28100298 | |
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| Dermal ?? T Cells Do Not Freely Re-Circulate Out of Skin and Produce IL-17 to Promote Neutrophil Infiltration during Primary Contact Hypersensitivity. | Jiang, Xiaodong; Park, Chang Ook; Geddes Sweeney, Jenna; Yoo, Min Jae; Gaide, Olivier; Kupper, Thomas Seth | PloS one. | 2017; | 28081153 | |
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| Cas13b Is a Type VI-B CRISPR-Associated RNA-Guided RNase Differentially Regulated by Accessory Proteins Csx27 and Csx28. | Smargon, Aaron A; Cox, David B T; Pyzocha, Neena K; Zheng, Kaijie; Slaymaker, Ian M; Gootenberg, Jonathan S; Abudayyeh, Omar A; Essletzbichler, Patrick; Shmakov, Sergey; Makarova, Kira S; Koonin, Eugene V; Zhang, Feng | Molecular cell. | 2017 Feb 16; | 28065598 | |
| Reconfigurable Three-Dimensional Gold Nanorod Plasmonic Nanostructures Organized on DNA Origami Tripod. | Zhan, Pengfei; Dutta, Palash K; Wang, Pengfei; Song, Gang; Dai, Mingjie; Zhao, Shu-Xia; Wang, Zhen-Gang; Yin, Peng; Zhang, Wei; Ding, Baoquan; Ke, Yonggang | ACS nano. | 2017 Feb 28; | 28056172 | |
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| SREBP1 Contributes to Resolution of Pro-inflammatory TLR4 Signaling by Reprogramming Fatty Acid Metabolism. | Oishi, Yumiko; Spann, Nathanael J; Link, Verena M; Muse, Evan D; Strid, Tobias; Edillor, Chantle; Kolar, Matthew J; Matsuzaka, Takashi; Hayakawa, Sumio; Tao, Jenhan; Kaikkonen, Minna U; Carlin, Aaron F; Lam, Michael T; Manabe, Ichiro; Shimano, Hitoshi; Saghatelian, Alan; Glass, Christopher K | Cell metabolism. | 2017 Feb 07; | 28041958 | |
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| In vivo label-free photoacoustic flow cytography and on-the-spot laser killing of single circulating melanoma cells. | He, Yun; Wang, Lidai; Shi, Junhui; Yao, Junjie; Li, Lei; Zhang, Ruiying; Huang, Chih-Hsien; Zou, Jun; Wang, Lihong V | Scientific reports. | 2016 Dec 21; | 28000788 | |
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| Molecular Checkpoint Decisions Made by Subverted Vascular Niche Transform Indolent Tumor Cells into Chemoresistant Cancer Stem Cells. | Cao, Zhongwei; Scandura, Joseph M; Inghirami, Giorgio G; Shido, Koji; Ding, Bi-Sen; Rafii, Shahin | Cancer cell. | 2017 Jan 09; | 27989801 | |
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| Tribbles ortholog NIPI-3 and bZIP transcription factor CEBP-1 regulate a Caenorhabditis elegans intestinal immune surveillance pathway. | McEwan, Deborah L; Feinbaum, Rhonda L; Stroustrup, Nicholas; Haas, Wilhelm; Conery, Annie L; Anselmo, Anthony; Sadreyev, Ruslan; Ausubel, Frederick M | BMC biology. | 2016 12 07; | 27927200 | |
| Small molecule modulator of sigma 2 receptor is neuroprotective and reduces cognitive deficits and neuroinflammation in experimental models of Alzheimer's disease. | Yi, Bitna; Sahn, James J; Ardestani, Pooneh Memar; Evans, Andrew K; Scott, Luisa L; Chan, Jessica Z; Iyer, Sangeetha; Crisp, Ashley; Zuniga, Gabriella; Pierce, Jonathan T; Martin, Stephen F; Shamloo, Mehrdad | Journal of neurochemistry. | 2017 Feb; | 27926996 | |
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| Reaching 200-ps timing resolution in a time-of-flight and depth-of-interaction positron emission tomography detector using phosphor-coated crystals and high-density silicon photomultipliers. | Kwon, Sun Il; Ferri, Alessandro; Gola, Alberto; Berg, Eric; Piemonte, Claudio; Cherry, Simon R; Roncali, Emilie | Journal of medical imaging (Bellingham, Wash.). | 2016 Oct; | 27921069 | |
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| Combine and Conquer: Double CTLA-4 and PD-1 Blockade Combined with Whole Tumor Antigen Vaccine Cooperate to Eradicate Tumors. | Homicsko, Krisztian; Duraiswamy, Jaikumar; Doucey, Marie-Agnès; Coukos, George | Cancer research. | 2016 12 01; | 27909064 | |
| Intronic polyadenylation of PDGFR? in resident stem cells attenuates muscle fibrosis. | Mueller, Alisa A; van Velthoven, Cindy T; Fukumoto, Kathryn D; Cheung, Tom H; Rando, Thomas A | Nature. | 2016 Dec 08; | 27894125 | |
| Potential of Small Molecule-Mediated Reprogramming of Rod Photoreceptors to Treat Retinitis Pigmentosa. | Nakamura, Paul A; Tang, Shibing; Shimchuk, Andy A; Ding, Sheng; Reh, Thomas A | Investigative ophthalmology & visual science. | 2016 11 01; | 27893103 | |
| Genomic approaches to the assessment of human spina bifida risk. | Ross, M Elizabeth; Mason, Christopher E; Finnell, Richard H | Birth defects research. Part A, Clinical and molecular teratology. | ; | 27883265 | |
| A pilot test of the acceptability and efficacy of narrative and non-narrative health education materials in a low health literacy population. | Moran, Meghan Bridgid; Frank, Lauren B; Chatterjee, Joyee S; Murphy, Sheila T; Baezconde-Garbanati, Lourdes | Journal of communication in healthcare. | 2016; | 27872657 | |
| Integrative classification of human coding and noncoding genes through RNA metabolism profiles. | Mukherjee, Neelanjan; Calviello, Lorenzo; Hirsekorn, Antje; de Pretis, Stefano; Pelizzola, Mattia; Ohler, Uwe | Nature structural & molecular biology. | 2017 01; | 27870833 | |
| Tumor-suppressor genes that escape from X-inactivation contribute to cancer sex bias. | Dunford, Andrew; Weinstock, David M; Savova, Virginia; Schumacher, Steven E; Cleary, John P; Yoda, Akinori; Sullivan, Timothy J; Hess, Julian M; Gimelbrant, Alexander A; Beroukhim, Rameen; Lawrence, Michael S; Getz, Gad; Lane, Andrew A | Nature genetics. | 2017 Jan; | 27869828 | |
| Oxidative costs of reproduction in mouse strains selected for different levels of food intake and which differ in reproductive performance. | Jothery, Aqeel H Al; Vaanholt, Lobke M; Mody, Nimesh; Arnous, Anis; Lykkesfeldt, Jens; Bünger, Lutz; Hill, William G; Mitchell, Sharon E; Allison, David B; Speakman, John R | Scientific reports. | 2016 Nov 14; | 27841266 | |
| The Human Microbiome before Birth. | Blaser, Martin J; Dominguez-Bello, Maria G | Cell host & microbe. | 2016 Nov 09; | 27832586 | |
| Label-free high-throughput detection and quantification of circulating melanoma tumor cell clusters by linear-array-based photoacoustic tomography. | Hai, Pengfei; Zhou, Yong; Zhang, Ruiying; Ma, Jun; Li, Yang; Shao, Jin-Yu; Wang, Lihong V | Journal of biomedical optics. | 2017 Apr 01; | 27832253 | |
| Inhibition of RAS function through targeting an allosteric regulatory site. | Spencer-Smith, Russell; Koide, Akiko; Zhou, Yong; Eguchi, Raphael R; Sha, Fern; Gajwani, Priyanka; Santana, Dianicha; Gupta, Ankit; Jacobs, Miranda; Herrero-Garcia, Erika; Cobbert, Jacqueline; Lavoie, Hugo; Smith, Matthew; Rajakulendran, Thanashan; Dowdell, Evan; Okur, Mustafa Nazir; Dementieva, Irina; Sicheri, Frank; Therrien, Marc; Hancock, John F; Ikura, Mitsuhiko; Koide, Shohei; O'Bryan, John P | Nature chemical biology. | 2017 Jan; | 27820802 | |
| Tensor Analysis Reveals Distinct Population Structure that Parallels the Different Computational Roles of Areas M1 and V1. | Seely, Jeffrey S; Kaufman, Matthew T; Ryu, Stephen I; Shenoy, Krishna V; Cunningham, John P; Churchland, Mark M | PLoS computational biology. | 2016 Nov; | 27814353 | |
| Nucleoporin-mediated regulation of cell identity genes. | Ibarra, Arkaitz; Benner, Chris; Tyagi, Swati; Cool, Jonah; Hetzer, Martin W | Genes & development. | 2016 Oct 15; | 27807035 | |
| Release of Cell-free MicroRNA Tumor Biomarkers into the Blood Circulation with Pulsed Focused Ultrasound: A Noninvasive, Anatomically Localized, Molecular Liquid Biopsy. | Chevillet, John R; Khokhlova, Tatiana D; Giraldez, Maria D; Schade, George R; Starr, Frank; Wang, Yak-Nam; Gallichotte, Emily N; Wang, Kai; Hwang, Joo Ha; Tewari, Muneesh | Radiology. | 2017 04; | 27802108 | |
| Telomere shortening and metabolic compromise underlie dystrophic cardiomyopathy. | Chang, Alex Chia Yu; Ong, Sang-Ging; LaGory, Edward L; Kraft, Peggy E; Giaccia, Amato J; Wu, Joseph C; Blau, Helen M | Proceedings of the National Academy of Sciences of the United States of America. | ; | 27799523 | |
| Monitoring peripheral nerve degeneration in ALS by label-free stimulated Raman scattering imaging. | Tian, Feng; Yang, Wenlong; Mordes, Daniel A; Wang, Jin-Yuan; Salameh, Johnny S; Mok, Joanie; Chew, Jeannie; Sharma, Aarti; Leno-Duran, Ester; Suzuki-Uematsu, Satomi; Suzuki, Naoki; Han, Steve S; Lu, Fa-Ke; Ji, Minbiao; Zhang, Rosanna; Liu, Yue; Strominger, Jack; Shneider, Neil A; Petrucelli, Leonard; Xie, X Sunney; Eggan, Kevin | Nature communications. | 2016 10 31; | 27796305 | |
| Optogenetic activation of dopamine neurons in the ventral tegmental area induces reanimation from general anesthesia. | Taylor, Norman E; Van Dort, Christa J; Kenny, Jonathan D; Pei, JunZhu; Guidera, Jennifer A; Vlasov, Ksenia Y; Lee, Justin T; Boyden, Edward S; Brown, Emery N; Solt, Ken | Proceedings of the National Academy of Sciences of the United States of America. | 2016 Oct 24; | 27791160 | |
| Polymeric nanofiber coating with tunable combinatorial antibiotic delivery prevents biofilm-associated infection in vivo. | Ashbaugh, Alyssa G; Jiang, Xuesong; Zheng, Jesse; Tsai, Andrew S; Kim, Woo-Shin; Thompson, John M; Miller, Robert J; Shahbazian, Jonathan H; Wang, Yu; Dillen, Carly A; Ordonez, Alvaro A; Chang, Yong S; Jain, Sanjay K; Jones, Lynne C; Sterling, Robert S; M | Proceedings of the National Academy of Sciences of the United States of America. | 2016 Nov 08; | 27791154 | |
| Targeting CYP2J to reduce paclitaxel-induced peripheral neuropathic pain. | Sisignano, Marco; Angioni, Carlo; Park, Chul-Kyu; Meyer Dos Santos, Sascha; Jordan, Holger; Kuzikov, Maria; Liu, Di; Zinn, Sebastian; Hohman, Stephan W; Schreiber, Yannick; Zimmer, Béla; Schmidt, Mike; Lu, Ruirui; Suo, Jing; Zhang, Dong-Dong; Schäfer, Stephan M G; Hofmann, Martine; Yekkirala, Ajay S; de Bruin, Natasja; Parnham, Michael J; Woolf, Clifford J; Ji, Ru-Rong; Scholich, Klaus; Geisslinger, Gerd | Proceedings of the National Academy of Sciences of the United States of America. | 2016 11 01; | 27791151 | |
| Roles for small noncoding RNAs in silencing of retrotransposons in the mammalian brain. | Nandi, Sayan; Chandramohan, Dhruva; Fioriti, Luana; Melnick, Ari M; Hébert, Jean M; Mason, Christopher E; Rajasethupathy, Priyamvada; Kandel, Eric R | Proceedings of the National Academy of Sciences of the United States of America. | 2016 Oct 24; | 27791114 | |
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| Hydrolysis and Sulfation Pattern Effects on Release of Bioactive Bone Morphogenetic Protein-2 from Heparin-Based Microparticles. | Tellier, Liane E; Miller, Tobias; McDevitt, Todd C; Temenoff, Johnna S | Journal of materials chemistry. B, Materials for biology and medicine. | 2015 Oct 28; | 27785363 | |
| Advances in bone marrow stem cell therapy for retinal dysfunction. | Park, Susanna S; Moisseiev, Elad; Bauer, Gerhard; Anderson, Johnathon D; Grant, Maria B; Zam, Azhar; Zawadzki, Robert J; Werner, John S; Nolta, Jan A | Progress in retinal and eye research. | 2016 Oct 23; | 27784628 | |
| Use of a single xenon flash lamp for photoacoustic computed tomography of multiple-centimeter-thick biological tissue ex vivo and a whole mouse body in vivo. | Wong, Terence T W; Zhou, Yong; Garcia-Uribe, Alejandro; Li, Lei; Maslov, Konstantin; Lin, Li; Wang, Lihong V | Journal of biomedical optics. | 2017 Apr 01; | 27775747 | |
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| N6-Methyladenosine in Flaviviridae Viral RNA Genomes Regulates Infection. | Gokhale, Nandan S; McIntyre, Alexa B R; McFadden, Michael J; Roder, Allison E; Kennedy, Edward M; Gandara, Jorge A; Hopcraft, Sharon E; Quicke, Kendra M; Vazquez, Christine; Willer, Jason; Ilkayeva, Olga R; Law, Brittany A; Holley, Christopher L; Garcia-Blanco, Mariano A; Evans, Matthew J; Suthar, Mehul S; Bradrick, Shelton S; Mason, Christopher E; Horner, Stacy M | Cell host & microbe. | ; | 27773535 | |
| Sodium nitroprusside enhanced cardiopulmonary resuscitation improves short term survival in a porcine model of ischemic refractory ventricular fibrillation. | Yannopoulos, Demetris; Bartos, Jason A; George, Stephen A; Sideris, George; Voicu, Sebastian; Oestreich, Brett; Matsuura, Timothy; Shekar, Kadambari; Rees, Jennifer; Aufderheide, Tom P | Resuscitation. | 2017 Jan; | 27771299 | |
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| Identifying Important Gaps in Randomized Controlled Trials of Adult Cardiac Arrest Treatments: A Systematic Review of the Published Literature. | Sinha, Shashank S; Sukul, Devraj; Lazarus, John J; Polavarapu, Vivek; Chan, Paul S; Neumar, Robert W; Nallamothu, Brahmajee K | Circulation. Cardiovascular quality and outcomes. | 2016 Nov; | 27756794 | |
| Prospective functional classification of all possible missense variants in PPARG. | Majithia, Amit R; Tsuda, Ben; Agostini, Maura; Gnanapradeepan, Keerthana; Rice, Robert; Peloso, Gina; Patel, Kashyap A; Zhang, Xiaolan; Broekema, Marjoleine F; Patterson, Nick; Duby, Marc; Sharpe, Ted; Kalkhoven, Eric; Rosen, Evan D; Barroso, Inês; Ellard, Sian; UK Monogenic Diabetes Consortium; Kathiresan, Sekar; Myocardial Infarction Genetics Consortium; O'Rahilly, Stephen; UK Congenital Lipodystrophy Consortium; Chatterjee, Krishna; Florez, Jose C; Mikkelsen, Tarjei; Savage, David B; Altshuler, David | Nature genetics. | ; | 27749844 | |
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| Design of Selective Substrates and Activity-Based Probes for Hydrolase Important for Pathogenesis 1 (HIP1) from Mycobacterium tuberculosis. | Lentz, Christian S; Ordonez, Alvaro A; Kasperkiewicz, Paulina; La Greca, Florencia; O'Donoghue, Anthony J; Schulze, Christopher J; Powers, James C; Craik, Charles S; Drag, Marcin; Jain, Sanjay K; Bogyo, Matthew | ACS infectious diseases. | 2016 11 11; | 27739665 | |
| Combination of an Integrin-Targeting NIR Tracer and an Ultrasensitive Spectroscopic Device for Intraoperative Detection of Head and Neck Tumor Margins and Metastatic Lymph Nodes. | Yoon, Younghyoun; Mohs, Aaron M; Mancini, Michael C; Nie, Shuming; Shim, Hyunsuk | Tomography : a journal for imaging research. | 2016 Sep; | 27738656 | |
| Large-scale microfluidics providing high-resolution and high-throughput screening of Caenorhabditis elegans poly-glutamine aggregation model. | Mondal, Sudip; Hegarty, Evan; Martin, Chris; Gökçe, Sertan Kutal; Ghorashian, Navid; Ben-Yakar, Adela | Nature communications. | 2016 Oct 11; | 27725672 | |
| Microenvironment-dependent growth of preneoplastic and malignant plasma cells in humanized mice. | Das, Rituparna; Strowig, Till; Verma, Rakesh; Koduru, Srinivas; Hafemann, Anja; Hopf, Stephanie; Kocoglu, Mehmet H; Borsotti, Chiara; Zhang, Lin; Branagan, Andrew; Eynon, Elizabeth; Manz, Markus G; Flavell, Richard A; Dhodapkar, Madhav V | Nature medicine. | 2016 Nov; | 27723723 | |
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| Recombinant Expression of Cyclotides Using Split Inteins. | Jagadish, Krishnappa; Camarero, Julio A | Methods in molecular biology (Clifton, N.J.). | 2017; | 27714609 | |
| Ultra-Specific Isolation of Circulating Tumor Cells Enables Rare-Cell RNA Profiling. | Jack, Rhonda M; Grafton, Meggie M G; Rodrigues, Danika; Giraldez, Maria D; Griffith, Catherine; Cieslak, Robert; Zeinali, Mina; Kumar Sinha, Chandan; Azizi, Ebrahim; Wicha, Max; Tewari, Muneesh; Simeone, Diane M; Nagrath, Sunitha | Advanced science (Weinheim, Baden-Wurttemberg, Germany). | 2016 Sep; | 27711257 | |
| Spatiotemporal Dynamics of Dexmedetomidine-Induced Electroencephalogram Oscillations. | Akeju, Oluwaseun; Kim, Seong-Eun; Vazquez, Rafael; Rhee, James; Pavone, Kara J; Hobbs, Lauren E; Purdon, Patrick L; Brown, Emery N | PloS one. | 2016; | 27711165 | |
| TREM2 Haplodeficiency in Mice and Humans Impairs the Microglia Barrier Function Leading to Decreased Amyloid Compaction and Severe Axonal Dystrophy. | Yuan, Peng; Condello, Carlo; Keene, C Dirk; Wang, Yaming; Bird, Thomas D; Paul, Steven M; Luo, Wenjie; Colonna, Marco; Baddeley, David; Grutzendler, Jaime | Neuron. | 2016 10 05; | 27710785 | |
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| Prenatal and Perinatal Risk Factors and the Promise of Birth Cohort Studies: Origins of Obsessive-Compulsive Disorder. | Fernandez, Thomas V; Leckman, James F | JAMA psychiatry. | 2016 Nov 01; | 27706471 | |
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| High incidence of activating STAT5B mutations in CD4-positive T-cell large granular lymphocyte leukemia. | Andersson, Emma I; Tanahashi, Takahiro; Sekiguchi, Nodoka; Gasparini, Vanessa Rebecca; Bortoluzzi, Sabrina; Kawakami, Toru; Matsuda, Kazuyuki; Mitsui, Takeki; Eldfors, Samuli; Bortoluzzi, Stefania; Coppe, Alessandro; Binatti, Andrea; Lagström, Sonja; Ellonen, Pekka; Fukushima, Noriyasu; Nishina, Sayaka; Senoo, Noriko; Sakai, Hitoshi; Nakazawa, Hideyuki; Kwong, Yok-Lam; Loughran, Thomas P; Maciejewski, Jaroslaw P; Mustjoki, Satu; Ishida, Fumihiro | Blood. | 2016 11 17; | 27697773 | |
| Engineering T Cells with Customized Therapeutic Response Programs Using Synthetic Notch Receptors. | Roybal, Kole T; Williams, Jasper Z; Morsut, Leonardo; Rupp, Levi J; Kolinko, Isabel; Choe, Joseph H; Walker, Whitney J; McNally, Krista A; Lim, Wendell A | Cell. | 2016 Oct 6; | 27693353 | |
| Man's Best Friend: Utilizing Naturally Occurring Tumors in Dogs to Improve Chimeric Antigen Receptor T-cell Therapy for Human Cancers. | Mata, Melinda; Gottschalk, Stephen | Molecular therapy : the journal of the American Society of Gene Therapy. | 2016 Sep; | 27687136 | |
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| Exposing the Three-Dimensional Biogeography and Metabolic States of Pathogens in Cystic Fibrosis Sputum via Hydrogel Embedding, Clearing, and rRNA Labeling. | DePas, William H; Starwalt-Lee, Ruth; Van Sambeek, Lindsey; Ravindra Kumar, Sripriya; Gradinaru, Viviana; Newman, Dianne K | mBio. | 2016 Sep 27; | 27677788 | |
| Interferon alpha inhibits spinal cord synaptic and nociceptive transmission via neuronal-glial interactions. | Liu, Chien-Cheng; Gao, Yong-Jing; Luo, Hao; Berta, Temugin; Xu, Zhen-Zhong; Ji, Ru-Rong; Tan, Ping-Heng | Scientific reports. | 2016 Sep 27; | 27670299 | |
| The RNA-binding protein vigilin regulates VLDL secretion through modulation of Apob mRNA translation. | Mobin, Mehrpouya B; Gerstberger, Stefanie; Teupser, Daniel; Campana, Benedetta; Charisse, Klaus; Heim, Markus H; Manoharan, Muthiah; Tuschl, Thomas; Stoffel, Markus | Nature communications. | 2016 Sep 26; | 27665711 | |
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| The Role of CagA in the Gastric Biology of Helicobacter pylori. | Backert, Steffen; Blaser, Martin J | Cancer research. | 2016 07 15; | 27655809 | |
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| Enhanced Survival with Implantable Scaffolds That Capture Metastatic Breast Cancer Cells In Vivo. | Rao, Shreyas S; Bushnell, Grace G; Azarin, Samira M; Spicer, Graham; Aguado, Brian A; Stoehr, Jenna R; Jiang, Eric J; Backman, Vadim; Shea, Lonnie D; Jeruss, Jacqueline S | Cancer research. | 2016 Sep 15; | 27635043 | |
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| Natural Product Screening Reveals Naphthoquinone Complex I Bypass Factors. | Vafai, Scott B; Mevers, Emily; Higgins, Kathleen W; Fomina, Yevgenia; Zhang, Jianming; Mandinova, Anna; Newman, David; Shaw, Stanley Y; Clardy, Jon; Mootha, Vamsi K | PloS one. | 2016; | 27622560 | |
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| L1-associated genomic regions are deleted in somatic cells of the healthy human brain. | Erwin, Jennifer A; Paquola, Apuã C M; Singer, Tatjana; Gallina, Iryna; Novotny, Mark; Quayle, Carolina; Bedrosian, Tracy A; Alves, Francisco I A; Butcher, Cheyenne R; Herdy, Joseph R; Sarkar, Anindita; Lasken, Roger S; Muotri, Alysson R; Gage, Fred H | Nature neuroscience. | 2016 Dec; | 27618310 | |
| Preclinical evaluation of mesenchymal stem cells overexpressing VEGF to treat critical limb ischemia. | Beegle, Julie R; Magner, Nataly Lessa; Kalomoiris, Stefanos; Harding, Aja; Zhou, Ping; Nacey, Catherine; White, Jeannine Logan; Pepper, Karen; Gruenloh, William; Annett, Geralyn; Nolta, Jan A; Fierro, Fernando A | Molecular therapy. Methods & clinical development. | 2016; | 27610394 | |
| Cross-regulation of Phosphodiesterase 1 and Phosphodiesterase 2 Activities Controls Dopamine-mediated Striatal ?-Amino-3-hydroxy-5-methyl-4-isoxazolepropionic Acid (AMPA) Receptor Trafficking. | Song, Roy S; Tolentino, Rosa; Sobie, Eric A; Neves-Zaph, Susana R | The Journal of biological chemistry. | 2016 10 28; | 27605670 | |
| A Closed Loop Brain-machine Interface for Epilepsy Control Using Dorsal Column Electrical Stimulation. | Pais-Vieira, Miguel; Yadav, Amol P; Moreira, Derek; Guggenmos, David; Santos, Amílcar; Lebedev, Mikhail; Nicolelis, Miguel A L | Scientific reports. | 2016 Sep 08; | 27605389 | |
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| Information-dependent enrichment analysis reveals time-dependent transcriptional regulation of the estrogen pathway of toxicity. | Pendse, Salil N; Maertens, Alexandra; Rosenberg, Michael; Roy, Dipanwita; Fasani, Rick A; Vantangoli, Marguerite M; Madnick, Samantha J; Boekelheide, Kim; Fornace, Albert J; Odwin, Shelly-Ann; Yager, James D; Hartung, Thomas; Andersen, Melvin E; McMullen, Patrick D | Archives of toxicology. | 2017 Apr; | 27592001 | |
| Masters of Disguise: Antigenic Variation and the VSG Coat in Trypanosoma brucei. | Mugnier, Monica R; Stebbins, C Erec; Papavasiliou, F Nina | PLoS pathogens. | 2016 Sep; | 27583379 | |
| Environmental Enrichment Potently Prevents Microglia-Mediated Neuroinflammation by Human Amyloid ?-Protein Oligomers. | Xu, Huixin; Gelyana, Eilrayna; Rajsombath, Molly; Yang, Ting; Li, Shaomin; Selkoe, Dennis | The Journal of neuroscience : the official journal of the Society for Neuroscience. | 2016 Aug 31; | 27581448 | |
| inv(16) and NPM1mut AMLs engraft human cytokine knock-in mice. | Ellegast, Jana M; Rauch, Philipp J; Kovtonyuk, Larisa V; Müller, Rouven; Wagner, Ulrich; Saito, Yasuyuki; Wildner-Verhey van Wijk, Nicole; Fritz, Christine; Rafiei, Anahita; Lysenko, Veronika; Dudkiewicz, Ewa; Theocharides, Alexandre P; Soldini, Davide; Goede, Jeroen S; Flavell, Richard A; Manz, Markus G | Blood. | 2016 Oct 27; | 27581357 | |
| A High-Content, Phenotypic Screen Identifies Fluorouridine as an Inhibitor of Pyoverdine Biosynthesis and Pseudomonas aeruginosa Virulence. | Kirienko, Daniel R; Revtovich, Alexey V; Kirienko, Natalia V | mSphere. | 2016 Jul-Aug; | 27579370 | |
| Enrichment of the lung microbiome with oral taxa is associated with lung inflammation of a Th17 phenotype. | Segal, Leopoldo N; Clemente, Jose C; Tsay, Jun-Chieh J; Koralov, Sergei B; Keller, Brian C; Wu, Benjamin G; Li, Yonghua; Shen, Nan; Ghedin, Elodie; Morris, Alison; Diaz, Phillip; Huang, Laurence; Wikoff, William R; Ubeda, Carles; Artacho, Alejandro; Rom, William N; Sterman, Daniel H; Collman, Ronald G; Blaser, Martin J; Weiden, Michael D | Nature microbiology. | 2016; | 27572644 | |
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| Compartmentalized PDE4A5 Signaling Impairs Hippocampal Synaptic Plasticity and Long-Term Memory. | Havekes, Robbert; Park, Alan J; Tolentino, Rosa E; Bruinenberg, Vibeke M; Tudor, Jennifer C; Lee, Yool; Hansen, Rolf T; Guercio, Leonardo A; Linton, Edward; Neves-Zaph, Susana R; Meerlo, Peter; Baillie, George S; Houslay, Miles D; Abel, Ted | The Journal of neuroscience : the official journal of the Society for Neuroscience. | 2016 08 24; | 27559174 | |
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| High-Throughput Mapping of Single-Neuron Projections by Sequencing of Barcoded RNA. | Kebschull, Justus M; Garcia da Silva, Pedro; Reid, Ashlan P; Peikon, Ian D; Albeanu, Dinu F; Zador, Anthony M | Neuron. | 2016 Sep 07; | 27545715 | |
| Peripheral blood CD34+ cells efficiently engraft human cytokine knock-in mice. | Saito, Yasuyuki; Ellegast, Jana M; Rafiei, Anahita; Song, Yuanbin; Kull, Daniel; Heikenwalder, Mathias; Rongvaux, Anthony; Halene, Stephanie; Flavell, Richard A; Manz, Markus G | Blood. | 2016 Aug 19; | 27543436 | |
| Mechanistic Basis of Glutaminase Activation: A KEY ENZYME THAT PROMOTES GLUTAMINE METABOLISM IN CANCER CELLS. | Li, Yunxing; Erickson, Jon W; Stalnecker, Clint A; Katt, William P; Huang, Qingqiu; Cerione, Richard A; Ramachandran, Sekar | The Journal of biological chemistry. | 2016 Sep 30; | 27542409 | |
| ?-arrestin-2 regulates NMDA receptor function in spinal lamina II neurons and duration of persistent pain. | Chen, Gang; Xie, Rou-Gang; Gao, Yong-Jing; Xu, Zhen-Zhong; Zhao, Lin-Xia; Bang, Sangsu; Berta, Temugin; Park, Chul-Kyu; Lay, Mark; Chen, Wei; Ji, Ru-Rong | Nature communications. | 2016 08 19; | 27538456 | |
| Intravitreal Administration of Human Bone Marrow CD34+ Stem Cells in a Murine Model of Retinal Degeneration. | Moisseiev, Elad; Smit-McBride, Zeljka; Oltjen, Sharon; Zhang, Pengfei; Zawadzki, Robert J; Motta, Monica; Murphy, Christopher J; Cary, Whitney; Annett, Geralyn; Nolta, Jan A; Park, Susanna S | Investigative ophthalmology & visual science. | 2016 08 01; | 27537262 | |
| Focusing light through biological tissue and tissue-mimicking phantoms up to 9.6 cm in thickness with digital optical phase conjugation. | Shen, Yuecheng; Liu, Yan; Ma, Cheng; Wang, Lihong V | Journal of biomedical optics. | 2016 Aug 1; | 27533439 | |
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| FRET binding antenna reports spatiotemporal dynamics of GDI-Cdc42 GTPase interactions. | Hodgson, Louis; Spiering, Désirée; Sabouri-Ghomi, Mohsen; Dagliyan, Onur; DerMardirossian, Céline; Danuser, Gaudenz; Hahn, Klaus M | Nature chemical biology. | 2016 10; | 27501396 | |
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| Diverse evolutionary roots and mechanistic variations of the CRISPR-Cas systems. | Mohanraju, Prarthana; Makarova, Kira S; Zetsche, Bernd; Zhang, Feng; Koonin, Eugene V; van der Oost, John | Science (New York, N.Y.). | 2016 Aug 5; | 27493190 | |
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| Estradiol Exposure Differentially Alters Monolayer versus Microtissue MCF-7 Human Breast Carcinoma Cultures. | Vantangoli, Marguerite M; Madnick, Samantha J; Wilson, Shelby; Boekelheide, Kim | PloS one. | 2016; | 27379522 | |
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| Clinical trial perspective for adult and juvenile Huntington's disease using genetically-engineered mesenchymal stem cells. | Deng, Peter; Torrest, Audrey; Pollock, Kari; Dahlenburg, Heather; Annett, Geralyn; Nolta, Jan A; Fink, Kyle D | Neural regeneration research. | 2016 May; | 27335539 | |
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| RIPK3 Activates Parallel Pathways of MLKL-Driven Necroptosis and FADD-Mediated Apoptosis to Protect against Influenza A Virus. | Nogusa, Shoko; Thapa, Roshan J; Dillon, Christopher P; Liedmann, Swantje; Oguin 3rd, Thomas H; Ingram, Justin P; Rodriguez, Diego A; Kosoff, Rachelle; Sharma, Shalini; Sturm, Oliver; Verbist, Katherine; Gough, Peter J; Bertin, John; Hartmann, Boris M; Sea | Cell host & microbe. | 2016 Jul 13; | 27321907 | |
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| GABAA circuit mechanisms are associated with ether anesthesia-induced unconsciousness. | Akeju, Oluwaseun; Hamilos, Allison E; Song, Andrew H; Pavone, Kara J; Purdon, Patrick L; Brown, Emery N | Clinical neurophysiology : official journal of the International Federation of Clinical Neurophysiology. | 2016 Jun; | 27178867 | |
| Electroencephalogram signatures of ketamine anesthesia-induced unconsciousness. | Akeju, Oluwaseun; Song, Andrew H; Hamilos, Allison E; Pavone, Kara J; Flores, Francisco J; Brown, Emery N; Purdon, Patrick L | Clinical neurophysiology : official journal of the International Federation of Clinical Neurophysiology. | 2016 Jun; | 27178861 | |
| Toward a Predictive Understanding of Earth's Microbiomes to Address 21st Century Challenges. | Blaser, Martin J; Cardon, Zoe G; Cho, Mildred K; Dangl, Jeffrey L; Donohue, Timothy J; Green, Jessica L; Knight, Rob; Maxon, Mary E; Northen, Trent R; Pollard, Katherine S; Brodie, Eoin L | mBio. | 2016 05 13; | 27178263 | |
| A Randomized Controlled Trial of an Integrated Brain, Body, and Social Intervention for Children With ADHD. | Smith, Stephanie D; Vitulano, Lawrence A; Katsovich, Liliya; Li, Shuaixing; Moore, Christina; Li, Fenghua; Grantz, Heidi; Zheng, Xixi; Eicher, Virginia; Aktan Guloksuz, Selin; Zheng, Yi; Dong, Jinxia; Sukhodolsky, Denis G; Leckman, James F | Journal of attention disorders. | 2016 May 13; | 27178060 | |
| Efficient recombinant expression of SFTI-1 in bacterial cells using intein-mediated protein trans-splicing. | Li, Yilong; Aboye, Teshome; Breindel, Leonard; Shekhtman, Alexander; Camarero, Julio A | Biopolymers. | 2016 Nov; | 27178003 | |
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| The Dichotomous Effect of Chronic Stress on Obesity. | Razzoli, Maria; Bartolomucci, Alessandro | Trends in endocrinology and metabolism: TEM. | 2016 Jul; | 27162125 | |
| Genetic and epigenetic heterogeneity in acute myeloid leukemia. | Li, Sheng; Mason, Christopher E; Melnick, Ari | Current opinion in genetics & development. | 2016 Feb; | 27162099 | |
| Skin CD4(+) memory T cells exhibit combined cluster-mediated retention and equilibration with the circulation. | Collins, Nicholas; Jiang, Xiaodong; Zaid, Ali; Macleod, Bethany L; Li, Jane; Park, Chang Ook; Haque, Ashraful; Bedoui, Sammy; Heath, William R; Mueller, Scott N; Kupper, Thomas S; Gebhardt, Thomas; Carbone, Francis R | Nature communications. | 2016 May 10; | 27160938 | |
| Identification of selective covalent inhibitors of platelet activating factor acetylhydrolase 1B2 from the screening of an oxadiazolone-capped peptoid-azapeptoid hybrid library. | Sarma, Bani Kanta; Liu, Xiaodan; Kodadek, Thomas | Bioorganic & medicinal chemistry. | 2016 09 01; | 27160052 | |
| Engineered BDNF producing cells as a potential treatment for neurologic disease. | Deng, Peter; Anderson, Johnathon D; Yu, Abigail S; Annett, Geralyn; Fink, Kyle D; Nolta, Jan A | Expert opinion on biological therapy. | 2016 Aug; | 27159050 | |
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| Mass spectrometry-based antigen discovery for cancer immunotherapy. | Bassani-Sternberg, Michal; Coukos, George | Current opinion in immunology. | 2016 08; | 27155075 | |
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| Humanized mice efficiently engrafted with fetal hepatoblasts and syngeneic immune cells develop human monocytes and NK cells. | Billerbeck, Eva; Mommersteeg, Michiel C; Shlomai, Amir; Xiao, Jing W; Andrus, Linda; Bhatta, Ankit; Vercauteren, Koen; Michailidis, Eleftherios; Dorner, Marcus; Krishnan, Anuradha; Charlton, Michael R; Chiriboga, Luis; Rice, Charles M; de Jong, Ype P | Journal of hepatology. | 2016 08; | 27151182 | |
| Asialoglycoprotein receptor 1 is a specific cell-surface marker for isolating hepatocytes derived from human pluripotent stem cells. | Peters, Derek T; Henderson, Christopher A; Warren, Curtis R; Friesen, Max; Xia, Fang; Becker, Caroline E; Musunuru, Kiran; Cowan, Chad A | Development (Cambridge, England). | 2016 May 1; | 27143754 | |
| Array tomography of physiologically-characterized CNS synapses. | Valenzuela, Ricardo A; Micheva, Kristina D; Kiraly, Marianna; Li, Dong; Madison, Daniel V | Journal of neuroscience methods. | 2016 Aug 01; | 27141856 | |
| Interplay between diet, gut microbiota, epigenetic events, and colorectal cancer. | Bultman, Scott J | Molecular nutrition & food research. | ; | 27138454 | |
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| A review of snapshot multidimensional optical imaging: measuring photon tags in parallel. | Gao, Liang; Wang, Lihong V | Physics reports. | 2016 Feb 29; | 27134340 | |
| Pharmacological Reprogramming of Fibroblasts into Neural Stem Cells by Signaling-Directed Transcriptional Activation. | Zhang, Mingliang; Lin, Yuan-Hung; Sun, Yujiao Jennifer; Zhu, Saiyong; Zheng, Jiashun; Liu, Kai; Cao, Nan; Li, Ke; Huang, Yadong; Ding, Sheng | Cell stem cell. | 2016 May 05; | 27133794 | |
| Viral genome imaging of hepatitis C virus to probe heterogeneous viral infection and responses to antiviral therapies. | Ramanan, Vyas; Trehan, Kartik; Ong, Mei-Lyn; Luna, Joseph M; Hoffmann, Hans-Heinrich; Espiritu, Christine; Sheahan, Timothy P; Chandrasekar, Hamsika; Schwartz, Robert E; Christine, Kathleen S; Rice, Charles M; van Oudenaarden, Alexander; Bhatia, Sangeeta N | Virology. | 2016 07; | 27128351 | |
| Antibiotic use and its consequences for the normal microbiome. | Blaser, Martin J | Science (New York, N.Y.). | 2016 Apr 29; | 27126037 | |
| Antibiotic perturbation of the murine gut microbiome enhances the adiposity, insulin resistance, and liver disease associated with high-fat diet. | Mahana, Douglas; Trent, Chad M; Kurtz, Zachary D; Bokulich, Nicholas A; Battaglia, Thomas; Chung, Jennifer; Müller, Christian L; Li, Huilin; Bonneau, Richard A; Blaser, Martin J | Genome medicine. | 2016; | 27124954 | |
| Complementation of mitochondrial electron transport chain by manipulation of the NAD+/NADH ratio. | Titov, Denis V; Cracan, Valentin; Goodman, Russell P; Peng, Jun; Grabarek, Zenon; Mootha, Vamsi K | Science (New York, N.Y.). | 2016 Apr 8; | 27124460 | |
| Programmable RNA-binding protein composed of repeats of a single modular unit. | Adamala, Katarzyna P; Martin-Alarcon, Daniel A; Boyden, Edward S | Proceedings of the National Academy of Sciences of the United States of America. | 2016 May 10; | 27118836 | |
| Epigenetic profiles signify cell fate plasticity in unipotent spermatogonial stem and progenitor cells. | Liu, Ying; Giannopoulou, Eugenia G; Wen, Duancheng; Falciatori, Ilaria; Elemento, Olivier; Allis, C David; Rafii, Shahin; Seandel, Marco | Nature communications. | 2016 Apr 27; | 27117588 | |
| Crystal Structure of Cpf1 in Complex with Guide RNA and Target DNA. | Yamano, Takashi; Nishimasu, Hiroshi; Zetsche, Bernd; Hirano, Hisato; Slaymaker, Ian M; Li, Yinqing; Fedorova, Iana; Nakane, Takanori; Makarova, Kira S; Koonin, Eugene V; Ishitani, Ryuichiro; Zhang, Feng; Nureki, Osamu | Cell. | 2016 May 5; | 27114038 | |
| The Intestinal Microbiome and Estrogen Receptor-Positive Female Breast Cancer. | Kwa, Maryann; Plottel, Claudia S; Blaser, Martin J; Adams, Sylvia | Journal of the National Cancer Institute. | 2016 08; | 27107051 | |
| Towards a comprehensive atlas of cortical connections in a primate brain: Mapping tracer injection studies of the common marmoset into a reference digital template. | Majka, Piotr; Chaplin, Tristan A; Yu, Hsin-Hao; Tolpygo, Alexander; Mitra, Partha P; Wójcik, Daniel K; Rosa, Marcello G P | The Journal of comparative neurology. | 2016 08 01; | 27099164 | |
| Generating High-Accuracy Peptide-Binding Data in High Throughput with Yeast Surface Display and SORTCERY. | Reich, Lothar Luther; Dutta, Sanjib; Keating, Amy E | Methods in molecular biology (Clifton, N.J.). | 2016; | 27094295 | |
| Nuclear RNA-seq of single neurons reveals molecular signatures of activation. | Lacar, Benjamin; Linker, Sara B; Jaeger, Baptiste N; Krishnaswami, Suguna; Barron, Jerika; Kelder, Martijn; Parylak, Sarah; Paquola, Apuã; Venepally, Pratap; Novotny, Mark; O'Connor, Carolyn; Fitzpatrick, Conor; Erwin, Jennifer; Hsu, Jonathan Y; Husband, David; McConnell, Michael J; Lasken, Roger; Gage, Fred H | Nature communications. | 2016 Apr 19; | 27090946 | |
| Human induced pluripotent stem cell-derived cardiomyocytes recapitulate the predilection of breast cancer patients to doxorubicin-induced cardiotoxicity. | Burridge, Paul W; Li, Yong Fuga; Matsa, Elena; Wu, Haodi; Ong, Sang-Ging; Sharma, Arun; Holmström, Alexandra; Chang, Alex C; Coronado, Michael J; Ebert, Antje D; Knowles, Joshua W; Telli, Melinda L; Witteles, Ronald M; Blau, Helen M; Bernstein, Daniel; Al | Nature medicine. | 2016 May; | 27089514 | |
| The oncogenic transcription factor c-Jun regulates glutaminase expression and sensitizes cells to glutaminase-targeted therapy. | Lukey, Michael J; Greene, Kai Su; Erickson, Jon W; Wilson, Kristin F; Cerione, Richard A | Nature communications. | 2016; | 27089238 | |
| Tutorial on photoacoustic tomography. | Zhou, Yong; Yao, Junjie; Wang, Lihong V | Journal of biomedical optics. | 2016 Jun; | 27086868 | |
| Humanin: Functional Interfaces with IGF-I. | Xiao, J; Kim, S-J; Cohen, P; Yen, K | Growth hormone & IGF research : official journal of the Growth Hormone Research Society and the International IGF Research Society. | 2016 08; | 27082450 | |
| Helminth infection promotes colonization resistance via type 2 immunity. | Ramanan, Deepshika; Bowcutt, Rowann; Lee, Soo Ching; Tang, Mei San; Kurtz, Zachary D; Ding, Yi; Honda, Kenya; Gause, William C; Blaser, Martin J; Bonneau, Richard A; Lim, Yvonne A L; Loke, P'ng; Cadwell, Ken | Science (New York, N.Y.). | 2016 Apr 29; | 27080105 | |
| ''Next-generation'' mesenchymal stem or stromal cells for the in vivo delivery of bioactive factors: progressing toward the clinic. | Nolta, Jan A | Transfusion. | 2016 Apr; | 27079315 | |
| A distant trophoblast-specific enhancer controls HLA-G expression at the maternal-fetal interface. | Ferreira, Leonardo M R; Meissner, Torsten B; Mikkelsen, Tarjei S; Mallard, William; O'Donnell, Charles W; Tilburgs, Tamara; Gomes, Hannah A B; Camahort, Raymond; Sherwood, Richard I; Gifford, David K; Rinn, John L; Cowan, Chad A; Strominger, Jack L | Proceedings of the National Academy of Sciences of the United States of America. | 2016 May 10; | 27078102 | |
| Stanford's Outcomes Research in Kids (STORK): a prospective study of healthy pregnant women and their babies in Northern California. | Ley, Catherine; Sanchez, Maria de la Luz; Mathur, Ankur; Yang, Shufang; Sundaram, Vandana; Parsonnet, Julie | BMJ open. | 2016 Apr 13; | 27075843 | |
| Minireview: Genome Editing of Human Pluripotent Stem Cells for Modeling Metabolic Disease. | Yu, Haojie; Cowan, Chad A | Molecular endocrinology (Baltimore, Md.). | 2016 Jun; | 27075706 | |
| Nutrition and energetics in rodent longevity research. | Gibbs, Victoria K; Smith Jr, Daniel L | Experimental gerontology. | 2016 Apr 9; | 27073168 | |
| Mutant DNA quantification by digital PCR can be confounded by heating during DNA fragmentation. | Kang, Qing; Parkin, Brian; Giraldez, Maria D; Tewari, Muneesh | BioTechniques. | 2016 Apr; | 27071606 | |
| Naturally occurring mitochondrial-derived peptides are age-dependent regulators of apoptosis, insulin sensitivity, and inflammatory markers. | Cobb, Laura J; Lee, Changhan; Xiao, Jialin; Yen, Kelvin; Wong, Richard G; Nakamura, Hiromi K; Mehta, Hemal H; Gao, Qinglei; Ashur, Carmel; Huffman, Derek M; Wan, Junxiang; Muzumdar, Radhika; Barzilai, Nir; Cohen, Pinchas | Aging. | 2016 04; | 27070352 | |
| PROS-1/Prospero Is a Major Regulator of the Glia-Specific Secretome Controlling Sensory-Neuron Shape and Function in C. elegans. | Wallace, Sean W; Singhvi, Aakanksha; Liang, Yupu; Lu, Yun; Shaham, Shai | Cell reports. | 2016 Apr 19; | 27068465 | |
| New Techniques for the Study of Neural Tube Defects. | Lei, Yunping; Finnell, Richard H | Advanced techniques in biology & medicine. | 2016 Feb; | 27066597 | |
| Chemical and biological production of cyclotides. | Li, Yilong; Bi, Tao; Camarero, Julio A | Advances in botanical research. | 2015; | 27064329 | |
| A Glial K/Cl Transporter Controls Neuronal Receptive Ending Shape by Chloride Inhibition of an rGC. | Singhvi, Aakanksha; Liu, Bingqian; Friedman, Christine J; Fong, Jennifer; Lu, Yun; Huang, Xin-Yun; Shaham, Shai | Cell. | 2016 May 05; | 27062922 | |
| Lipoxin A4 inhibits microglial activation and reduces neuroinflammation and neuropathic pain after spinal cord hemisection. | Martini, Alessandra Cadete; Berta, Temugin; Forner, Stefânia; Chen, Gang; Bento, Allisson Freire; Ji, Ru-Rong; Rae, Giles Alexander | Journal of neuroinflammation. | 2016 Apr 08; | 27059991 | |
| Multiple Parallel Pathways of Translation Initiation on the CrPV IRES. | Petrov, Alexey; Grosely, Rosslyn; Chen, Jin; O'Leary, Seán E; Puglisi, Joseph D | Molecular cell. | 2016 Apr 7; | 27058789 | |
| Effect of Local and General Anesthetics on Interfacial Water. | Kundacina, Nenad; Shi, Minghui; Pollack, Gerald H | PloS one. | 2016; | 27054588 | |
| Metabolomics-assisted proteomics identifies succinylation and SIRT5 as important regulators of cardiac function. | Sadhukhan, Sushabhan; Liu, Xiaojing; Ryu, Dongryeol; Nelson, Ornella D; Stupinski, John A; Li, Zhi; Chen, Wei; Zhang, Sheng; Weiss, Robert S; Locasale, Jason W; Auwerx, Johan; Lin, Hening | Proceedings of the National Academy of Sciences of the United States of America. | 2016 Apr 19; | 27051063 | |
| PAPERCLIP Identifies MicroRNA Targets and a Role of CstF64/64tau in Promoting Non-canonical poly(A) Site Usage. | Hwang, Hun-Way; Park, Christopher Y; Goodarzi, Hani; Fak, John J; Mele, Aldo; Moore, Michael J; Saito, Yuhki; Darnell, Robert B | Cell reports. | 2016 Apr 12; | 27050522 | |
| A neuronal circuit for colour vision based on rod-cone opponency. | Joesch, Maximilian; Meister, Markus | Nature. | 2016 Apr 14; | 27049951 | |
| The Power of Engaging Citizen Scientists for Scientific Progress. | Garbarino, Jeanne; Mason, Christopher E | Journal of microbiology & biology education. | 2016 Mar; | 27047581 | |
| Metabolomic network analysis of estrogen-stimulated MCF-7 cells: a comparison of overrepresentation analysis, quantitative enrichment analysis and pathway analysis versus metabolite network analysis. | Maertens, Alexandra; Bouhifd, Mounir; Zhao, Liang; Odwin-DaCosta, Shelly; Kleensang, Andre; Yager, James D; Hartung, Thomas | Archives of toxicology. | 2016 Apr 2; | 27039105 | |
| A primerless molecular diagnostic: phosphorothioated-terminal hairpin formation and self-priming extension (PS-THSP). | Jung, Cheulhee; Ellington, Andrew D | Analytical and bioanalytical chemistry. | 2016 Dec; | 27032410 | |
| N-Acetylcysteine in the Treatment of Pediatric Tourette Syndrome: Randomized, Double-Blind, Placebo-Controlled Add-On Trial. | Bloch, Michael H; Panza, Kaitlyn E; Yaffa, Alisa; Alvarenga, Pedro G; Jakubovski, Ewgeni; Mulqueen, Jilian M; Landeros-Weisenberger, Angeli; Leckman, James F | Journal of child and adolescent psychopharmacology. | 2016 05; | 27027204 | |
| Superior In vivo Transduction of Human Hepatocytes Using Engineered AAV3 Capsid. | Vercauteren, Koen; Hoffman, Brad E; Zolotukhin, Irene; Keeler, Geoffrey D; Xiao, Jing W; Basner-Tschakarjan, Etiena; High, Katherine A; Ertl, Hildegund Cj; Rice, Charles M; Srivastava, Arun; de Jong, Ype P; Herzog, Roland W | Molecular therapy : the journal of the American Society of Gene Therapy. | 2016 06; | 27019999 | |
| Quantitative super-resolution imaging with qPAINT. | Jungmann, Ralf; Avendaño, Maier S; Dai, Mingjie; Woehrstein, Johannes B; Agasti, Sarit S; Feiger, Zachary; Rodal, Avital; Yin, Peng | Nature methods. | 2016 May; | 27018580 | |
| The Fuzzy Logic of Network Connectivity in Mouse Visual Thalamus. | Morgan, Josh Lyskowski; Berger, Daniel Raimund; Wetzel, Arthur Willis; Lichtman, Jeff William | Cell. | 2016 Mar 24; | 27015312 | |
| Calories or protein? The effect of dietary restriction on lifespan in rodents is explained by calories alone. | Speakman, J R; Mitchell, S E; Mazidi, M | Experimental gerontology. | 2016 12 15; | 27006163 | |
| Rapid and Long-Term Immunity Elicited by DNA-Encoded Antibody Prophylaxis and DNA Vaccination Against Chikungunya Virus. | Muthumani, Karuppiah; Block, Peter; Flingai, Seleeke; Muruganantham, Nagarajan; Chaaithanya, Itta Krishna; Tingey, Colleen; Wise, Megan; Reuschel, Emma L; Chung, Christopher; Muthumani, Abirami; Sarangan, Gopalsamy; Srikanth, Padma; Khan, Amir S; Vijayachari, Paluru; Sardesai, Niranjan Y; Kim, J Joseph; Ugen, Kenneth E; Weiner, David B | The Journal of infectious diseases. | 2016 Aug 01; | 27001960 | |
| Conditional deletion of L1CAM in human neurons impairs both axonal and dendritic arborization and action potential generation. | Patzke, Christopher; Acuna, Claudio; Giam, Louise R; Wernig, Marius; Südhof, Thomas C | The Journal of experimental medicine. | 2016 Apr 04; | 27001749 | |
| Modeling the integration of bacterial rRNA fragments into the human cancer genome. | Sieber, Karsten B; Gajer, Pawel; Dunning Hotopp, Julie C | BMC bioinformatics. | 2016; | 27001685 | |
| UTX in muscle regeneration - the right dose and the right time. | Liu, Ling; Rando, Thomas A | The Journal of clinical investigation. | 2016 Apr 1; | 26999609 | |
| T cell-intrinsic ASC critically promotes T(H)17-mediated experimental autoimmune encephalomyelitis. | Martin, Bradley N; Wang, Chenhui; Zhang, Cun-jin; Kang, Zizhen; Gulen, Muhammet Fatih; Zepp, Jarod A; Zhao, Junjie; Bian, Guanglin; Do, Jeong-su; Min, Booki; Pavicic Jr, Paul G; El-Sanadi, Caroline; Fox, Paul L; Akitsu, Aoi; Iwakura, Yoichiro; Sarkar, Ana | Nature immunology. | 2016 May; | 26998763 | |
| A Neural Basis for Control of Cichlid Female Reproductive Behavior by Prostaglandin F2?. | Juntti, Scott A; Hilliard, Austin T; Kent, Kai R; Kumar, Anusha; Nguyen, Andrew; Jimenez, Mariana A; Loveland, Jasmine L; Mourrain, Philippe; Fernald, Russell D | Current biology : CB. | 2016 Apr 4; | 26996507 | |
| RNA Imaging with Dimeric Broccoli in Live Bacterial and Mammalian Cells. | Filonov, Grigory S; Jaffrey, Samie R | Current protocols in chemical biology. | 2016 Mar 16; | 26995352 | |
| A Three-Enzyme Pathway with an Optimised Geometric Arrangement to Facilitate Substrate Transfer. | Liu, Minghui; Fu, Jinglin; Qi, Xiaodong; Wootten, Shaun; Woodbury, Neal W; Liu, Yan; Yan, Hao | Chembiochem : a European journal of chemical biology. | 2016 06 16; | 26995014 | |
| Physostigmine and Methylphenidate Induce Distinct Arousal States During Isoflurane General Anesthesia in Rats. | Kenny, Jonathan D; Chemali, Jessica J; Cotten, Joseph F; Van Dort, Christa J; Kim, Seong-Eun; Ba, Demba; Taylor, Norman E; Brown, Emery N; Solt, Ken | Anesthesia and analgesia. | 2016 Mar 17; | 26991753 | |
| The Mitochondrial-Derived Peptide Humanin Protects RPE Cells From Oxidative Stress, Senescence, and Mitochondrial Dysfunction. | Sreekumar, Parameswaran G; Ishikawa, Keijiro; Spee, Chris; Mehta, Hemal H; Wan, Junxiang; Yen, Kelvin; Cohen, Pinchas; Kannan, Ram; Hinton, David R | Investigative ophthalmology & visual science. | 2016 Mar; | 26990160 | |
| A SIRT2-Selective Inhibitor Promotes c-Myc Oncoprotein Degradation and Exhibits Broad Anticancer Activity. | Jing, Hui; Hu, Jing; He, Bin; Negrón Abril, Yashira L; Stupinski, Jack; Weiser, Keren; Carbonaro, Marisa; Chiang, Ying-Ling; Southard, Teresa; Giannakakou, Paraszkevi; Weiss, Robert S; Lin, Hening | Cancer cell. | 2016 Mar 14; | 26977881 | |
| Focusing light through scattering media by full-polarization digital optical phase conjugation. | Shen, Yuecheng; Liu, Yan; Ma, Cheng; Wang, Lihong V | Optics letters. | 2016 Mar 15; | 26977651 | |
| Hybrid Microscopy: Enabling Inexpensive High-Performance Imaging through Combined Physical and Optical Magnifications. | Zhang, Yu Shrike; Chang, Jae-Byum; Alvarez, Mario Moisés; Trujillo-de Santiago, Grissel; Aleman, Julio; Batzaya, Byambaa; Krishnadoss, Vaishali; Ramanujam, Aishwarya Aravamudhan; Kazemzadeh-Narbat, Mehdi; Chen, Fei; Tillberg, Paul W; Dokmeci, Mehmet Remzi | Scientific reports. | 2016; | 26975883 | |
| The microbiome and its potential as a cancer preventive intervention. | Bultman, Scott J | Seminars in oncology. | 2016 Feb; | 26970128 | |
| Autism-associated SHANK3 haploinsufficiency causes Ih channelopathy in human neurons. | Yi, Fei; Danko, Tamas; Botelho, Salome Calado; Patzke, Christopher; Pak, ChangHui; Wernig, Marius; Südhof, Thomas C | Science (New York, N.Y.). | 2016 May 6; | 26966193 | |
| Altering the Mitochondrial Fatty Acid Synthesis (mtFASII) Pathway Modulates Cellular Metabolic States and Bioactive Lipid Profiles as Revealed by Metabolomic Profiling. | Clay, Hayley B; Parl, Angelika K; Mitchell, Sabrina L; Singh, Larry; Bell, Lauren N; Murdock, Deborah G | PloS one. | 2016; | 26963735 | |
| A Broad RNA Virus Survey Reveals Both miRNA Dependence and Functional Sequestration. | Scheel, Troels K H; Luna, Joseph M; Liniger, Matthias; Nishiuchi, Eiko; Rozen-Gagnon, Kathryn; Shlomai, Amir; Auray, Gaël; Gerber, Markus; Fak, John; Keller, Irene; Bruggmann, Rémy; Darnell, Robert B; Ruggli, Nicolas; Rice, Charles M | Cell host & microbe. | 2016 Mar 9; | 26962949 | |
| Application of the TGx-28.65 transcriptomic biomarker to classify genotoxic and non-genotoxic chemicals in human TK6 cells in the presence of rat liver S9. | Yauk, Carole L; Buick, Julie K; Williams, Andrew; Swartz, Carol D; Recio, Leslie; Li, Heng-Hong; Fornace Jr, Albert J; Thomson, Errol M; Aubrecht, Jiri | Environmental and molecular mutagenesis. | 2016 May; | 26946220 | |
| Neurovascular and Immuno-Imaging: From Mechanisms to Therapies. Proceedings of the Inaugural Symposium. | Akassoglou, Katerina; Agalliu, Dritan; Chang, Christopher J; Davalos, Dimitrios; Grutzendler, Jaime; Hillman, Elizabeth M C; Khakh, Baljit S; Kleinfeld, David; McGavern, Dorian B; Nelson, Sarah J; Zlokovic, Berislav V | Frontiers in neuroscience. | 2016; | 26941593 | |
| Assembly and operation of the autopatcher for automated intracellular neural recording in vivo. | Kodandaramaiah, Suhasa B; Holst, Gregory L; Wickersham, Ian R; Singer, Annabelle C; Franzesi, Giovanni Talei; McKinnon, Michael L; Forest, Craig R; Boyden, Edward S | Nature protocols. | 2016 Apr; | 26938115 | |
| Helicobacter pylori in children with asthmatic conditions at school age, and their mothers. | den Hollander, W J; Sonnenschein-van der Voort, A M M; Holster, I L; de Jongste, J C; Jaddoe, V W; Hofman, A; Perez-Perez, G I; Moll, H A; Blaser, M J; Duijts, L; Kuipers, E J | Alimentary pharmacology & therapeutics. | 2016 Mar 1; | 26932510 | |
| Functional and topological diversity of LOV domain photoreceptors. | Glantz, Spencer T; Carpenter, Eric J; Melkonian, Michael; Gardner, Kevin H; Boyden, Edward S; Wong, Gane Ka-Shu; Chow, Brian Y | Proceedings of the National Academy of Sciences of the United States of America. | 2016 Mar 15; | 26929367 | |
| Improving the accuracy of brain tumor surgery via Raman-based technology. | Hollon, Todd; Lewis, Spencer; Freudiger, Christian W; Sunney Xie, X; Orringer, Daniel A | Neurosurgical focus. | 2016 Mar; | 26926067 | |
| Activating Peptides for Cellular Uptake via Polymerization into High Density Brushes. | Blum, Angela P; Kammeyer, Jacquelin K; Gianneschi, Nathan C | Chemical science (Royal Society of Chemistry : 2010). | 2016 Feb 1; | 989-994 | 26925209 |
| The Human Toxome Collaboratorium: A Shared Environment for Multi-Omic Computational Collaboration within a Consortium. | Fasani, Rick A; Livi, Carolina B; Choudhury, Dipanwita R; Kleensang, Andre; Bouhifd, Mounir; Pendse, Salil N; McMullen, Patrick D; Andersen, Melvin E; Hartung, Thomas; Rosenberg, Michael | Frontiers in pharmacology. | 2015; | 26924983 | |
| Morphologic effects of estrogen stimulation on 3D MCF-7 microtissues. | Vantangoli, Marguerite M; Wilson, Shelby; Madnick, Samantha J; Huse, Susan M; Boekelheide, Kim | Toxicology letters. | 2016 Apr 25; | 26921789 | |
| Hypoxia as a therapy for mitochondrial disease. | Jain, Isha H; Zazzeron, Luca; Goli, Rahul; Alexa, Kristen; Schatzman-Bone, Stephanie; Dhillon, Harveen; Goldberger, Olga; Peng, Jun; Shalem, Ophir; Sanjana, Neville E; Zhang, Feng; Goessling, Wolfram; Zapol, Warren M; Mootha, Vamsi K | Science (New York, N.Y.). | 2016 Apr 1; | 26917594 | |
| High-Throughput Measurement of Binding Kinetics by mRNA Display and Next-Generation Sequencing. | Jalali-Yazdi, Farzad; Lai, Lan Huong; Takahashi, Terry T; Roberts, Richard W | Angewandte Chemie (International ed. in English). | 2016 Mar 14; | 26914638 | |
| Allosteric Inhibition of Bcr-Abl Kinase by High Affinity Monobody Inhibitors Directed to the Src Homology 2 (SH2)-Kinase Interface. | Wojcik, John; Lamontanara, Allan Joaquim; Grabe, Grzegorz; Koide, Akiko; Akin, Louesa; Gerig, Barbara; Hantschel, Oliver; Koide, Shohei | The Journal of biological chemistry. | 2016 Apr 15; | 26912659 | |
| Organoids as Models for Neoplastic Transformation. | Neal, James T; Kuo, Calvin J | Annual review of pathology. | 2016 05 23; | 26907527 | |
| Analogous Convergence of Sustained and Transient Inputs in Parallel On and Off Pathways for Retinal Motion Computation. | Greene, Matthew J; Kim, Jinseop S; Seung, H Sebastian; EyeWirers | Cell reports. | 2016 Mar 01; | 26904938 | |
| The Development and Analysis of Integrated Neuroscience Data. | Glaser, Joshua I; Kording, Konrad P | Frontiers in computational neuroscience. | 2016; | 26903852 | |
| The effect of biomechanical variables on force sensitive resistor error: Implications for calibration and improved accuracy. | Schofield, Jonathon S; Evans, Katherine R; Hebert, Jacqueline S; Marasco, Paul D; Carey, Jason P | Journal of biomechanics. | 2016 Mar 21; | 26903413 | |
| saRNA-guided Ago2 targets the RITA complex to promoters to stimulate transcription. | Portnoy, Victoria; Lin, Szu Hua Sharon; Li, Kathy H; Burlingame, Alma; Hu, Zheng-Hui; Li, Hao; Li, Long-Cheng | Cell research. | 2016 Mar; | 26902284 | |
| Autoantibodies against homocysteinylated protein in a mouse model of folate deficiency-induced neural tube defects. | Denny, Kerina J; Kelly, Christina F; Kumar, Vinod; Witham, Katey L; Cabrera, Robert M; Finnell, Richard H; Taylor, Stephen M; Jeanes, Angela; Woodruff, Trent M | Birth defects research. Part A, Clinical and molecular teratology. | 2016 Mar; | 26900104 | |
| Regulatory consequences of neuronal ELAV-like protein binding to coding and non-coding RNAs in human brain. | Scheckel, Claudia; Drapeau, Elodie; Frias, Maria A; Park, Christopher Y; Fak, John; Zucker-Scharff, Ilana; Kou, Yan; Haroutunian, Vahram; Ma'ayan, Avi; Buxbaum, Joseph D; Darnell, Robert B | eLife. | 2016; | 26894958 | |
| Using single nuclei for RNA-seq to capture the transcriptome of postmortem neurons. | Krishnaswami, Suguna Rani; Grindberg, Rashel V; Novotny, Mark; Venepally, Pratap; Lacar, Benjamin; Bhutani, Kunal; Linker, Sara B; Pham, Son; Erwin, Jennifer A; Miller, Jeremy A; Hodge, Rebecca; McCarthy, James K; Kelder, Martin; McCorrison, Jamison; Aevermann, Brian D; Fuertes, Francisco Diez; Scheuermann, Richard H; Lee, Jun; Lein, Ed S; Schork, Nicholas; McConnell, Michael J; Gage, Fred H; Lasken, Roger S | Nature protocols. | 2016 Mar; | 26890679 | |
| Mapping of Variable DNA Methylation Across Multiple Cell Types Defines a Dynamic Regulatory Landscape of the Human Genome. | Gu, Junchen; Stevens, Michael; Xing, Xiaoyun; Li, Daofeng; Zhang, Bo; Payton, Jacqueline E; Oltz, Eugene M; Jarvis, James N; Jiang, Kaiyu; Cicero, Theodore; Costello, Joseph F; Wang, Ting | G3 (Bethesda) | 2016 | P:973-86 | 26888867 |
| Fibroblast Growth Factor 2 Regulates High Mobility Group A2 Expression in Human Bone Marrow-Derived Mesenchymal Stem Cells. | Kalomoiris, Stefanos; Cicchetto, Andrew C; Lakatos, Kinga; Nolta, Jan A; Fierro, Fernando A | Journal of cellular biochemistry. | 2016 Sep; | 26888666 | |
| Near-infrared operating lamp for intraoperative molecular imaging of a mediastinal tumor. | Keating, Jane; Judy, Ryan; Newton, Andrew; Singhal, Sunil | BMC medical imaging. | 2016; | 26883511 | |
| Photoacoustic microscopy of arteriovenous shunts and blood diffusion in early-stage tumors. | Yeh, Chenghung; Liang, Jinyang; Zhou, Yong; Hu, Song; Sohn, Rebecca E; Arbeit, Jeffrey M; Wang, Lihong V | Journal of biomedical optics. | 2016 Feb; | 26882446 | |
| Imbalance in Resting State Functional Connectivity is Associated with Eating Behaviors and Adiposity in Children. | Chodkowski, BettyAnn A; Cowan, Ronald L; Niswender, Kevin D | Heliyon. | 2016 Jan; | 26878067 | |
| Structure and Engineering of Francisella novicida Cas9. | Hirano, Hisato; Gootenberg, Jonathan S; Horii, Takuro; Abudayyeh, Omar O; Kimura, Mika; Hsu, Patrick D; Nakane, Takanori; Ishitani, Ryuichiro; Hatada, Izuho; Zhang, Feng; Nishimasu, Hiroshi; Nureki, Osamu | Cell. | 2016 Feb 25; | 26875867 | |
| Photoacoustic elastography. | Hai, Pengfei; Yao, Junjie; Li, Guo; Li, Chiye; Wang, Lihong V | Optics letters. | 2016 Feb 15; | 26872173 | |
| Spatially resolved proteomic mapping in living cells with the engineered peroxidase APEX2. | Hung, Victoria; Udeshi, Namrata D; Lam, Stephanie S; Loh, Ken H; Cox, Kurt J; Pedram, Kayvon; Carr, Steven A; Ting, Alice Y | Nature protocols. | 2016 Mar; | 26866790 | |
| A computational approach to studying ageing at the individual level. | Harvanek, Zachary M; Mourão, Márcio A; Schnell, Santiago; Pletcher, Scott D | Proceedings. Biological sciences / The Royal Society. | 2016 Feb 10; | 26865300 | |
| Clonal Immunoglobulin against Lysolipids in the Origin of Myeloma. | Nair, Shiny; Branagan, Andrew R; Liu, Jun; Boddupalli, Chandra Sekhar; Mistry, Pramod K; Dhodapkar, Madhav V | The New England journal of medicine. | 2016 Feb 11; | 555-61 | 26863356 |
| Nanocaged enzymes with enhanced catalytic activity and increased stability against protease digestion. | Zhao, Zhao; Fu, Jinglin; Dhakal, Soma; Johnson-Buck, Alexander; Liu, Minghui; Zhang, Ting; Woodbury, Neal W; Liu, Yan; Walter, Nils G; Yan, Hao | Nature communications. | 2016; | 26861509 | |
| Plakophilin-2 loss promotes TGF-?1/p38 MAPK-dependent fibrotic gene expression in cardiomyocytes. | Dubash, Adi D; Kam, Chen Y; Aguado, Brian A; Patel, Dipal M; Delmar, Mario; Shea, Lonnie D; Green, Kathleen J | The Journal of cell biology. | 2016 Feb 15; | 26858265 | |
| A Bayesian nonparametric approach for uncovering rat hippocampal population codes during spatial navigation. | Linderman, Scott W; Johnson, Matthew J; Wilson, Matthew A; Chen, Zhe | Journal of neuroscience methods. | 2016 Feb 5; | 36-47 | 26854398 |
| Allele-Specific Reduction of the Mutant Huntingtin Allele Using Transcription Activator-Like Effectors in Human Huntington's Disease Fibroblasts. | Fink, Kyle D; Deng, Peter; Gutierrez, Josh; Anderson, Joseph S; Torrest, Audrey; Komarla, Anvita; Kalomoiris, Stefanos; Cary, Whitney; Anderson, Johnathon D; Gruenloh, William; Duffy, Alexandra; Tempkin, Teresa; Annett, Geralyn; Wheelock, Vicki; Segal, David J; Nolta, Jan A | Cell transplantation. | 2016; | 26850319 | |
| Extracellular matrix mediators of metastatic cell colonization characterized using scaffold mimics of the pre-metastatic niche. | Aguado, Brian A; Caffe, Jordan R; Nanavati, Dhaval; Rao, Shreyas S; Bushnell, Grace G; Azarin, Samira M; Shea, Lonnie D | Acta biomaterialia. | 2016 Mar 15; | 13-24 | 26844426 |
| Stress-induced activation of brown adipose tissue prevents obesity in conditions of low adaptive thermogenesis. | Razzoli, Maria; Frontini, Andrea; Gurney, Allison; Mondini, Eleonora; Cubuk, Cankut; Katz, Liora S; Cero, Cheryl; Bolan, Patrick J; Dopazo, Joaquin; Vidal-Puig, Antonio; Cinti, Saverio; Bartolomucci, Alessandro | Molecular metabolism. | 2016 Jan; | 19-33 | 26844204 |
| Genome assembly and geospatial phylogenomics of the bed bug Cimex lectularius. | Rosenfeld, Jeffrey A; Reeves, Darryl; Brugler, Mercer R; Narechania, Apurva; Simon, Sabrina; Durrett, Russell; Foox, Jonathan; Shianna, Kevin; Schatz, Michael C; Gandara, Jorge; Afshinnekoo, Ebrahim; Lam, Ernest T; Hastie, Alex R; Chan, Saki; Cao, Han; Saghbini, Michael; Kentsis, Alex; Planet, Paul J; Kholodovych, Vladyslav; Tessler, Michael; Baker, Richard; DeSalle, Rob; Sorkin, Louis N; Kolokotronis, Sergios-Orestis; Siddall, Mark E; Amato, George; Mason, Christopher E | Nature communications. | 2016; | 26836631 | |
| Precision Tumor Recognition by T Cells With Combinatorial Antigen-Sensing Circuits. | Roybal, Kole T; Rupp, Levi J; Morsut, Leonardo; Walker, Whitney J; McNally, Krista A; Park, Jason S; Lim, Wendell A | Cell. | 2016 Feb 11; | 770-9 | 26830879 |
| Engineering Customized Cell Sensing and Response Behaviors Using Synthetic Notch Receptors. | Morsut, Leonardo; Roybal, Kole T; Xiong, Xin; Gordley, Russell M; Coyle, Scott M; Thomson, Matthew; Lim, Wendell A | Cell. | 2016 Feb 11; | 780-91 | 26830878 |
| Partial restoration of the microbiota of cesarean-born infants via vaginal microbial transfer. | Dominguez-Bello, Maria G; De Jesus-Laboy, Kassandra M; Shen, Nan; Cox, Laura M; Amir, Amnon; Gonzalez, Antonio; Bokulich, Nicholas A; Song, Se Jin; Hoashi, Marina; Rivera-Vinas, Juana I; Mendez, Keimari; Knight, Rob; Clemente, Jose C | Nature medicine. | 2016 Mar; | 26828196 | |
| Design of a MCoTI-Based Cyclotide with Angiotensin (1-7)-Like Activity. | Aboye, Teshome; Meeks, Christopher J; Majumder, Subhabrata; Shekhtman, Alexander; Rodgers, Kathleen; Camarero, Julio A | Molecules (Basel, Switzerland). | 2016 Jan 26; | 26821010 | |
| Aberrant Activation of p38 MAP Kinase-Dependent Innate Immune Responses Is Toxic to Caenorhabditis elegans. | Cheesman, Hilary K; Feinbaum, Rhonda L; Thekkiniath, Jose; Dowen, Robert H; Conery, Annie L; Pukkila-Worley, Read | G3 (Bethesda, Md.). | 2016 Jan 27; | 26818074 | |
| Peptide- and Amine-Modified Glucan Particles for the Delivery of Therapeutic siRNA. | Cohen, Jessica L; Shen, Yuefei; Aouadi, Myriam; Vangala, Pranitha; Tencerova, Michaela; Amano, Shinya U; Nicoloro, Sarah M; Yawe, Joseph C; Czech, Michael P | Molecular pharmaceutics. | 2016 Mar 07; | 26815386 | |
| Genes with monoallelic expression contribute disproportionately to genetic diversity in humans. | Savova, Virginia; Chun, Sung; Sohail, Mashaal; McCole, Ruth B; Witwicki, Robert; Gai, Lisa; Lenz, Tobias L; Wu, C-ting; Sunyaev, Shamil R; Gimelbrant, Alexander A | Nature genetics. | 2016 Mar; | 26808112 | |
| Celecoxib does not alter intestinal microbiome in a longitudinal diet-controlled study. | Bokulich, N A; Battaglia, T; Aleman, J O; Walker, J M; Blaser, M J; Holt, P R | Clinical microbiology and infection : the official publication of the European Society of Clinical Microbiology and Infectious Diseases. | 2016 May; | 26806255 | |
| Angiocrine functions of organ-specific endothelial cells. | Rafii, Shahin; Butler, Jason M; Ding, Bi-Sen | Nature. | 2016 Jan 21; | 316-25 | 26791722 |
| SutA is a bacterial transcription factor expressed during slow growth in Pseudomonas aeruginosa. | Babin, Brett M; Bergkessel, Megan; Sweredoski, Michael J; Moradian, Annie; Hess, Sonja; Newman, Dianne K; Tirrell, David A | Proceedings of the National Academy of Sciences of the United States of America. | 2016 Feb 2; | 26787849 | |
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| Effect of long-term antibiotic use on weight in adolescents with acne. | Contopoulos-Ioannidis, Despina G; Ley, Catherine; Wang, Wei; Ma, Ting; Olson, Clifford; Shi, Xiaoli; Luft, Harold S; Hastie, Trevor; Parsonnet, Julie | The Journal of antimicrobial chemotherapy. | 2016 Apr; | 26782773 | |
| Comprehensive Proteomic Analysis of Mesenchymal Stem Cell Exosomes Reveals Modulation of Angiogenesis via Nuclear Factor-KappaB Signaling. | Anderson, Johnathon D; Johansson, Henrik J; Graham, Calvin S; Vesterlund, Mattias; Pham, Missy T; Bramlett, Charles S; Montgomery, Elizabeth N; Mellema, Matt S; Bardini, Renee L; Contreras, Zelenia; Hoon, Madeline; Bauer, Gerhard; Fink, Kyle D; Fury, Brian; Hendrix, Kyle J; Chedin, Frederic; El-Andaloussi, Samir; Hwang, Billie; Mulligan, Michael S; Lehtiö, Janne; Nolta, Jan A | Stem cells (Dayton, Ohio). | 2016 Mar; | 26782178 | |
| Comparison of the peptide binding preferences of three closely related TRAF paralogs: TRAF2, TRAF3, and TRAF5. | Foight, Glenna Wink; Keating, Amy E | Protein science : a publication of the Protein Society. | 2016 Jan 18; | 26779844 | |
| REPRODUCIBLE RESEARCH WORKFLOW IN R FOR THE ANALYSIS OF PERSONALIZED HUMAN MICROBIOME DATA. | Callahan, Benjamin; Proctor, Diana; Relman, David; Fukuyama, Julia; Holmes, Susan | Pacific Symposium on Biocomputing. Pacific Symposium on Biocomputing. | 2016; | 183-94 | 26776185 |
| Human Mesenchymal Stem Cells Genetically Engineered to Overexpress Brain-derived Neurotrophic Factor Improve Outcomes in Huntington's disease Mouse Models. | Pollock, K; Dahlenburg, H; Nelson, H; Fink, K D; Cary, W; Hendrix, K; Annett, G; Torrest, A; Deng, P; Gutierrez, J; Nacey, C; Pepper, K; Kalomoiris, S; Anderson, J D; McGee, J L; Gruenloh, W; Fury, B; Bauer, G; Duffy, A; Tempkin, T; Wheelock, V; Nolta, J A | Molecular therapy : the journal of the American Society of Gene Therapy. | 2016 Jan 14; | 26765769 | |
| BMI1 Regulation of Self-Renewal and Multipotency in Human Mesenchymal Stem Cells. | Jung, Yunjoon; Nolta, Jan A | Current stem cell research & therapy. | 2016; | 26763885 | |
| Attenuation of ?-Amyloid Deposition and Neurotoxicity by Chemogenetic Modulation of Neural Activity. | Yuan, Peng; Grutzendler, Jaime | The Journal of neuroscience : the official journal of the Society for Neuroscience. | 2016 Jan 13; | 26758850 | |
| A Germline Variant on Chromosome 4q31.1 Associates with Susceptibility to Developing Colon Cancer Metastasis. | Markowitz, Sanford D; Nock, Nora L; Schmit, Stephanie L; Stadler, Zsofia K; Joseph, Vijai; Zhang, Lu; Willis, Joseph E; Scacheri, Peter; Veigl, Martina; Adams, Mark D; Raskin, Leon; Sullivan, John F; Stratton, Kelly; Shia, Jinru; Ellis, Nathan; Rennert, Hedy S; Manschreck, Christopher; Li, Li; Offit, Kenneth; Elston, Robert C; Rennert, Gadi; Gruber, Stephen B | PloS one. | 2016; | 26751797 | |
| N(6)-methyladenosine in mRNA disrupts tRNA selection and translation-elongation dynamics. | Choi, Junhong; Ieong, Ka-Weng; Demirci, Hasan; Chen, Jin; Petrov, Alexey; Prabhakar, Arjun; O'Leary, Seán E; Dominissini, Dan; Rechavi, Gideon; Soltis, S Michael; Ehrenberg, Måns; Puglisi, Joseph D | Nature structural & molecular biology. | 2016 Feb; | 26751643 | |
| Genome Editing in Human Pluripotent Stem Cells: Approaches, Pitfalls, and Solutions. | Hendriks, William T; Warren, Curtis R; Cowan, Chad A | Cell stem cell. | 2016 Jan 7; | 53-65 | 26748756 |
| Early Access to the Cardiac Catheterization Laboratory for Patients Resuscitated From Cardiac Arrest Due to a Shockable Rhythm: The Minnesota Resuscitation Consortium Twin Cities Unified Protocol. | Garcia, Santiago; Drexel, Todd; Bekwelem, Wobo; Raveendran, Ganesh; Caldwell, Emily; Hodgson, Lucinda; Wang, Qi; Adabag, Selcuk; Mahoney, Brian; Frascone, Ralph; Helmer, Gregory; Lick, Charles; Conterato, Marc; Baran, Kenneth; Bart, Bradley; Bachour, Fouad; Roh, Steven; Panetta, Carmelo; Stark, Randall; Haugland, Mark; Mooney, Michael; Wesley, Keith; Yannopoulos, Demetris | Journal of the American Heart Association. | 2016; | 26744380 | |
| tRNA is a new target for cleavage by a MazF toxin. | Schifano, Jason M; Cruz, Jonathan W; Vvedenskaya, Irina O; Edifor, Regina; Ouyang, Ming; Husson, Robert N; Nickels, Bryce E; Woychik, Nancy A | Nucleic acids research. | 2016 Feb 18; | 26740583 | |
| Spatial variation in automated burst suppression detection in pharmacologically induced coma. | An, Jingzhi; Jonnalagadda, Durga; Moura, Valdery; Purdon, Patrick L; Brown, Emery N; Westover, M Brandon | Conference proceedings : ... Annual International Conference of the IEEE Engineering in Medicine and Biology Society. IEEE Engineering in Medicine and Biology Society. Annual Conference. | 2015; | 26738009 | |
| Effect of low-expression gene filtering on detection of differentially expressed genes in RNA-seq data. | Sha, Ying; Phan, John H; Wang, May D | Conference proceedings : ... Annual International Conference of the IEEE Engineering in Medicine and Biology Society. IEEE Engineering in Medicine and Biology Society. Annual Conference. | 2015 Aug; | 26737772 | |
| Leveraging historical knowledge of neural dynamics to rescue decoder performance as neural channels are lost: ''Decoder hysteresis''. | Kao, Jonathan C; Ryu, Stephen I; Shenoy, Krishna V | Conference proceedings : ... Annual International Conference of the IEEE Engineering in Medicine and Biology Society. IEEE Engineering in Medicine and Biology Society. Annual Conference. | 2015 08; | 26736448 | |
| Detection of blur artifacts in histopathological whole-slide images of endomyocardial biopsies. | Hang Wu; Phan, John H; Bhatia, Ajay K; Cundiff, Caitlin A; Shehata, Bahig M; Wang, May D | Conference proceedings : ... Annual International Conference of the IEEE Engineering in Medicine and Biology Society. IEEE Engineering in Medicine and Biology Society. Annual Conference. | 2015; | 26736365 | |
| An enhanced cerebral recovery index for coma prognostication following cardiac arrest. | Ghassemi, Mohammad M; Amorim, Edilberto; Pati, Sandipan B; Mark, Roger G; Brown, Emery N; Purdon, Patrick L; Westover, M Brandon | Conference proceedings : ... Annual International Conference of the IEEE Engineering in Medicine and Biology Society. IEEE Engineering in Medicine and Biology Society. Annual Conference. | 2015; | 26736317 | |
| Auto-deleting brain machine interface: Error detection using spiking neural activity in the motor cortex. | Even-Chen, Nir; Stavisky, Sergey D; Kao, Jonathan C; Ryu, Stephen I; Shenoy, Krishna V | Conference proceedings : ... Annual International Conference of the IEEE Engineering in Medicine and Biology Society. IEEE Engineering in Medicine and Biology Society. Annual Conference. | 2015; | 26736203 | |
| Validation of a Low-Cost Paper-Based Screening Test for Sickle Cell Anemia. | Piety, Nathaniel Z; Yang, Xiaoxi; Kanter, Julie; Vignes, Seth M; George, Alex; Shevkoplyas, Sergey S | PloS one. | 2016; | 26735691 | |
| miR-124-9-9* potentiates Ascl1-induced reprogramming of cultured Müller glia. | Wohl, Stefanie Gabriele; Reh, Thomas Andrew | Glia. | 2016 May; | 26732729 | |
| In Vivo Reprogramming for Brain and Spinal Cord Repair. | Chen, Gong; Wernig, Marius; Berninger, Benedikt; Nakafuku, Masato; Parmar, Malin; Zhang, Chun-Li | eNeuro. | 2015 Sep-Oct; | 26730402 | |
| Humanized hemato-lymphoid system mice. | Theocharides, Alexandre P A; Rongvaux, Anthony; Fritsch, Kristin; Flavell, Richard A; Manz, Markus G | Haematologica. | 2016 Jan; | 26721800 | |
| In vivo gene editing in dystrophic mouse muscle and muscle stem cells. | Tabebordbar, Mohammadsharif; Zhu, Kexian; Cheng, Jason K W; Chew, Wei Leong; Widrick, Jeffrey J; Yan, Winston X; Maesner, Claire; Wu, Elizabeth Y; Xiao, Ru; Ran, F Ann; Cong, Le; Zhang, Feng; Vandenberghe, Luk H; Church, George M; Wagers, Amy J | Science (New York, N.Y.). | 2016 Jan 22; | 407-11 | 26721686 |
| In vivo genome editing improves muscle function in a mouse model of Duchenne muscular dystrophy. | Nelson, Christopher E; Hakim, Chady H; Ousterout, David G; Thakore, Pratiksha I; Moreb, Eirik A; Castellanos Rivera, Ruth M; Madhavan, Sarina; Pan, Xiufang; Ran, F Ann; Yan, Winston X; Asokan, Aravind; Zhang, Feng; Duan, Dongsheng; Gersbach, Charles A | Science (New York, N.Y.). | 2016 Jan 22; | 403-7 | 26721684 |
| Photoacoustic tomography of vascular compliance in humans. | Hai, Pengfei; Zhou, Yong; Liang, Jinyang; Li, Chiye; Wang, Lihong V | Journal of biomedical optics. | 2015; | 26720875 | |
| In vivo photoacoustic tomography of myoglobin oxygen saturation. | Lin, Li; Yao, Junjie; Li, Lei; Wang, Lihong V | Journal of biomedical optics. | 2016 Jun; | 26719943 | |
| Trace incorporation of heavy water reveals slow and heterogeneous pathogen growth rates in cystic fibrosis sputum. | Kopf, Sebastian H; Sessions, Alex L; Cowley, Elise S; Reyes, Carmen; Van Sambeek, Lindsey; Hu, Yang; Orphan, Victoria J; Kato, Roberta; Newman, Dianne K | Proceedings of the National Academy of Sciences of the United States of America. | 2016 Jan 12; | 26715741 | |
| Shape matters: the effect of red blood cell shape on perfusion of an artificial microvascular network. | Piety, Nathaniel Z; Reinhart, Walter H; Pourreau, Patrick H; Abidi, Rajaa; Shevkoplyas, Sergey S | Transfusion. | 2015 Dec 29; | 26711854 | |
| Transforming growth factor-beta 1 delivery from microporous scaffolds decreases inflammation post-implant and enhances function of transplanted islets. | Liu, Jeffrey M H; Zhang, Jesse; Zhang, Xiaomin; Hlavaty, Kelan A; Ricci, Christine F; Leonard, Joshua N; Shea, Lonnie D; Gower, R Michael | Biomaterials. | 2016 Feb; | 9-Nov | 26701143 |